BAC Information

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BAC

Clone NameB6Ng01-037K21
Chromosome10 (Build37)
Map Location 40,896,187 - 40,896,890
singlet/doubletsinglet
Overlap genenone
Upstream geneBxdc1, 2410016F19Rik, Amd1, Amd2, LOC668051, Cdc2l6, LOC666374, Slc22a16, Ddo, 9030224M15Rik, Cdc40, Wasf1, Gpr6
Downstream geneA530089I17Rik, LOC633979, Zbtb24, Mical1, Smpd2, Ppil6, Cd164, 5033413D22Rik, EG629461, 2410017P07Rik, Sesn1, Armc2, 1700016J18Rik, LOC624784
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037K21.bB6Ng01-037K21.g
ACCDH865466DH865467
length91704
definitionDH865466|Mus musculus domesticus DNA, BAC clone: B6Ng01-037K21, 5' end.DH865467|Mus musculus domesticus DNA, BAC clone: B6Ng01-037K21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ttcaccccaattcatgaagaagcaaatgtgtataagaagaccattgtccc
aaccccttaagttggggggagtggttttggttacttgatgt
gaattcctggtccagagattacctataaaactaaaagctgtgtgagattt
accagccagggaatacttggctgaaagtctgagatgtctatgtaactcag
cctgtatgttgcagctcccagctctctggtggagaataaacagcaaggag
gcggaagagagcagccaatctcaagaaaggtatgaatgctcagagtggag
gggtctcgactcagacatatgactctgggatgtcagtagactcctggtga
tggacaaggcttttgtatatcaatgttcctcatatatatatatatatata
tatatacacatatatatatacacacacacacacacacacacatatatata
tacacctggaacagacgtaagaaagaagggtccacaatgattattcatgc
ccctttggacactatgaaatattgggtaaggaaattagcgctgctgaggc
caagttaggaactttttctgggctgaggagagctccgtagagcagaagag
catacatgctgactaagaagtaacaaattctcacaaggatactcaacaca
gaaagccttctgtggaccacgtggtgttatggatatgaagggtgattgat
gggaacagaagacaaagatacaaagatcatcgtggtcaaggaacctcccc
tgggaggaaatagtatcgagagaaaggatgtcagagggggtaggtttggt
ggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_40896187_40896890
seq2: B6Ng01-037K21.g_68_771 (reverse)

seq1  AACCACCATACCTACCCCCTCTGACATCCTTTCTCTCGATACTATTTCCT  50
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AACCACCAAACCTACCCCCTCTGACATCCTTTCTCTCGATACTATTTCCT  50

seq1  CCCAGGGGAGGTTCCTTGACCACGATGATCTTTGTATCTTTGTCTTCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGGGAGGTTCCTTGACCACGATGATCTTTGTATCTTTGTCTTCTGT  100

seq1  TCCCATCAATCACCCTTCATATCCATAACACCACGTGGTCCACAGAAGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATCAATCACCCTTCATATCCATAACACCACGTGGTCCACAGAAGGC  150

seq1  TTTCTGTGTTGAGTATCCTTGTGAGAATTTGTTACTTCTTAGTCAGCATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTGTTGAGTATCCTTGTGAGAATTTGTTACTTCTTAGTCAGCATG  200

seq1  TATGCTCTTCTGCTCTACGGAGCTCTCCTCAGCCCAGAAAAAGTTCCTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTCTTCTGCTCTACGGAGCTCTCCTCAGCCCAGAAAAAGTTCCTAA  250

seq1  CTTGGCCTCAGCAGCGCTAATTTCCTTACCCAATATTTCATAGTGTCCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCCTCAGCAGCGCTAATTTCCTTACCCAATATTTCATAGTGTCCAA  300

seq1  AGGGGCATGAATAATCATTGTGGACCCTTCTTTCTTACGTCTGTTCCAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGCATGAATAATCATTGTGGACCCTTCTTTCTTACGTCTGTTCCAGG  350

seq1  TGTATATATATATGTGTGTGTGTGTGTGTGTGTGTATATATATATGTGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATATATATGTGTGTGTGTGTGTGTGTGTGTATATATATATGTGTA  400

seq1  TATATATATATATATATATATATGAGGAACATTGATATACAAAAGCCTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATATATATATATATGAGGAACATTGATATACAAAAGCCTTG  450

seq1  TCCATCACCAGGAGTCTACTGACATCCCAGAGTCATATGTCTGAGTCGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCACCAGGAGTCTACTGACATCCCAGAGTCATATGTCTGAGTCGAG  500

seq1  ACCCCTCCACTCTGAGCATTCATACCTTTCTTGAGATTGGCTGCTCTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTCCACTCTGAGCATTCATACCTTTCTTGAGATTGGCTGCTCTCTT  550

seq1  CCGCCTCCTTGCTGTTTATTCTCCACCAGAGAGCTGGGAGCTGCAACATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCCTCCTTGCTGTTTATTCTCCACCAGAGAGCTGGGAGCTGCAACATA  600

seq1  CAGGCTGAGTTACATAGACATCTCAGACTTTCAGCCAAGTATTCCCTGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTGAGTTACATAGACATCTCAGACTTTCAGCCAAGTATTCCCTGGC  650

seq1  TGGTAAATCTCACACAGCTTTTAGTTTTATAGGTAATCTCTGGACCAGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAAATCTCACACAGCTTTTAGTTTTATAGGTAATCTCTGGACCAGGA  700

seq1  ATTC  704
      ||||
seq2  ATTC  704