BAC Information

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BAC

Clone NameB6Ng01-037P11
Chromosome10 (Build37)
Map Location 103,286,680 - 103,417,076
singlet/doubletdoublet
Overlap genenone
Upstream geneCart1, Lrriq1, LOC100043277, 6430590A10Rik, Slc6a15, EG667697, LOC667701
Downstream geneEG627488, EG667692, EG667695, LOC100043292
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037P11.bB6Ng01-037P11.g
ACCDH865673DH865674
length313861
definitionDH865673|Mus musculus domesticus DNA, BAC clone: B6Ng01-037P11, 5' end.DH865674|Mus musculus domesticus DNA, BAC clone: B6Ng01-037P11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(103,286,680 - 103,286,992)(103,416,537 - 103,417,076)
sequence
cagggctaggaagcaggagttggtgggttggtgagcagagggagtgggga
ggagaaaaggagtttcaaaggagaaactgggaaaggggacagcatttaaa
atgtaaataaagaaaatatctaataaaaatttaaaaaaaaaaaaattccc
cagaattccaaacatcacagaattgggtctggactcagtgagagaagatg
tacttaaccctggagagacttgtggccccagggagtggtgttgtttggtg
gggtggcagtgagtgggcagggtcatcctcttggagatggggagtgagga
agtatgggatgtg
gaattccaggagagccagggctacacagggaaaccatgtcttataaaata
gaaaggagagagagagagagagagagagagagagagagagagagagagag
agagagaatttaactgtgtgataacatatctgaaaacaattttagcaaag
tcaggattcctgcacattgagaaataacctgtttgtgaagaatatgtaat
cacagataagatttacttttcatatgaaaatacatgttatctttgctgcc
tatatcaaacattaactcttctcatacaagtgaattcatcaagtgcttcc
agataaaaagaaacaattgtatagagaggcatatgaggagagggaaaaaa
agaataaaagatagattagatatgggaaatataagaccatatttattatg
agaatatgctcttgattatagaatttgagagattccatgatgtgacattt
tagattggaatgcaagaaaaaaaaactgtagcttagctcagtctaagccc
aacagtttgataatttggaaaggagagaactggtacaaatccctgagtct
aaagtgcaaggacttgtagctccgaatccaaaagcaagagactacaagtt
tttcacctccagaacagaagtcctgtgttcaccattctatgatttttttt
ccttcccatgtggttcttcaggatagcccatggcaacccattcataatac
agatagataaaggcttagtttgatagatacttagagcattgtttcaaatg
tcaagttgttcctaaatacatctttactgtcatactcagaattaagctct
ccatcccatctttatccatgtttaattaaacccccacacagatgttgcat
gtgtatgttaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_103286680_103286992
seq2: B6Ng01-037P11.b_53_365

seq1  CAGGGCTAGGAAGCAGGAGTTGGTGGGTTGGTGAGCAGAGGGAGTGGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCTAGGAAGCAGGAGTTGGTGGGTTGGTGAGCAGAGGGAGTGGGGA  50

seq1  GGAGAAAAGGAGTTTCAAAGGAGAAACTGGGAAAGGGGACAGCATTTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAAAGGAGTTTCAAAGGAGAAACTGGGAAAGGGGACAGCATTTAAA  100

seq1  ATGTAAATAAAGAAAATATCTAATAAAAATTTAAAAAAAAAAAAATTCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAATAAAGAAAATATCTAATAAAAATTTAAAAAAAAAAAAATTCCC  150

seq1  CAGAATTCCAAACATCACAGAATTGGGTCTGGACTCAGTGAGAGAAGATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATTCCAAACATCACAGAATTGGGTCTGGACTCAGTGAGAGAAGATG  200

seq1  TACTTAACCCTGGAGAGACTTGTGGCCCCAGGGAGTGGTGTTGTTTGGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTAACCCTGGAGAGACTTGTGGCCCCAGGGAGTGGTGTTGTTTGGTG  250

seq1  GGGTGGCAGTGAGTGGGCAGGGTCATCCTCTTGGAGATGGGGAGTGAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGCAGTGAGTGGGCAGGGTCATCCTCTTGGAGATGGGGAGTGAGGA  300

seq1  AGTATGGGATGTG  313
      |||||||||||||
seq2  AGTATGGGATGTG  313

seq1: chr10_103416537_103417076
seq2: B6Ng01-037P11.g_389_934 (reverse)

seq1  TTAACATACACATGC-ACATCTGTGTGTGTGTTTAATTAAACATGGATAA  49
      ||||||||||||||| ||||||||||| | ||||||||||||||||||||
seq2  TTAACATACACATGCAACATCTGTGTGGGGGTTTAATTAAACATGGATAA  50

seq1  AGAT-GGATGGAGAGCTTATTTCTGAGTATGACAGTAAAGATGTA-TTAG  97
      |||| |||||||||||||| ||||||||||||||||||||||||| ||||
seq2  AGATGGGATGGAGAGCTTAATTCTGAGTATGACAGTAAAGATGTATTTAG  100

seq1  GAACAACCTGACATTTGAAACACTGCTCTAAGTATCTATC-AACTAAGCC  146
      ||||||| |||||||||||||| ||||||||||||||||| |||||||||
seq2  GAACAACTTGACATTTGAAACAATGCTCTAAGTATCTATCAAACTAAGCC  150

seq1  TTTATCTATCTGTCTTATGAAT-GGTTGCCATTGGCTATCCTGAAGAACC  195
      ||||||||||||| |||||||| ||||||||| |||||||||||||||||
seq2  TTTATCTATCTGTATTATGAATGGGTTGCCATGGGCTATCCTGAAGAACC  200

seq1  ACATGGGAAGG-AAAAAAATCATAGAATGGTGAACACAGGACTTCTGTTC  244
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  ACATGGGAAGGAAAAAAAATCATAGAATGGTGAACACAGGACTTCTGTTC  250

seq1  TGGAGGTGAAAAACTTGTAGTCTCTTGCTTTTGGATTCGGAGCTACAAGT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGTGAAAAACTTGTAGTCTCTTGCTTTTGGATTCGGAGCTACAAGT  300

seq1  CCTTGCACTTTAGACTCAGGGATTTGTACCAGTTCTCTCCTTTCCAAATT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCACTTTAGACTCAGGGATTTGTACCAGTTCTCTCCTTTCCAAATT  350

seq1  ATCAAACTGTTGGGCTTAGACTGAGCTAAGCTACAGTTTTTTTTTCTTGC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAACTGTTGGGCTTAGACTGAGCTAAGCTACAGTTTTTTTTTCTTGC  400

seq1  ATTCCAATCTAAAATGTCACATCATGGAATCTCTCAAATTCTATAATCAA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCAATCTAAAATGTCACATCATGGAATCTCTCAAATTCTATAATCAA  450

seq1  GAGCATATTCTCATAATAAATATGGTCTTATATTTCCCATATCTAATCTA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATATTCTCATAATAAATATGGTCTTATATTTCCCATATCTAATCTA  500

seq1  TCTTTTATTCTTTTTTTCCCTCTCCTCATATGCCTCTCTATACAAT  540
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTATTCTTTTTTTCCCTCTCCTCATATGCCTCTCTATACAAT  546