BAC Information

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BAC

Clone NameB6Ng01-038A08
Chromosome10 (Build37)
Map Location 38,984,858 - 38,985,634
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040915, Lama4, 1700025K23Rik, Tube1, EG624165, LOC100040964
Downstream geneFyn, LOC629337, Traf3ip2, LOC667964, EG667970, E130307A14Rik, Rev3l, EG666304, LOC213332, 4930547M16Rik, LOC667982, 2010001E11Rik, LOC667994, LOC100041085, BC021785, AI317395, EG666342, Slc16a10, Bxdc1, 2410016F19Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-038A08.bB6Ng01-038A08.g
ACCDH865715DH865716
length1,285777
definitionDH865715|Mus musculus domesticus DNA, BAC clone: B6Ng01-038A08, 5' end.DH865716|Mus musculus domesticus DNA, BAC clone: B6Ng01-038A08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggtgagaagctggaagcaatcccactaaa
atcagggactagacaaggctgtccactctctccctacctattcaacattg
tacttgaagtcctagccagaacaattagacaataaaaggagatcaagggg
acacaaattggaaaggaagaagtcaaaatatcactatttgcagatgatat
gatagtatatataagtgaccctaaaaatcccaccagagaactcctaagcc
tgaaaaacagcttcaatgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctgtacacaaaggataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaataatataaaataccttggcg
tgactctaactaaggaagtgaaagatctgtatgacaagaacttcaagtct
ctgaagaaacaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggatcaatacagtaaaaatggctatcctgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aacgaattagaaagggcaattggcagattcatctggaataacaaaaaacc
aaggatagcaaaaactcttctcaaggataaaagaacctctggtggaatca
ccatgcctgacctaaagctgtactacagagcaattgtgataaaaactgca
tgatactggtatagcgacagacaagtagaccaatggaacagaattgaaga
cccatagatgaacccacacacctatggtcacttgatctttgacaaggaag
ctaaaaccatccagtggaaaaaagacagcattttcaacaaatggtgctgg
cacactggctgttatcatgtagaagaatgaaattgatccattcctatctc
atgtactaaggtcaatctaagtggattaggactccacataaaaccagaga
cactgaaacttatagaggagaagtagggaaagcttcgaagatatgggtac
aggggaaaattctgaatagaaagcatgcctgtgctgtagatcaagaatcg
ataatggacctcataagttgcagcttcgcaagcaagacctgtcataagaa
caaagacaccccacatggagactttctatcttacgatggacgaatcgtat
ataagaacttaagtggacctcgcggctcaatagca
gaattcacacataccatagtcaggtataattgctagccgatgctacaact
ttactgagttccctggcagccaaagaaaagatgggaacaaataattaaga
atagcgaggcccctgagattaagaacatacataggattataattctttac
ttgagctttttttttttttcttgtagattctcataaggagaccaagtagc
aagggatgcctagcctcagtgtatctttactttcataacagacacgatga
tccgctgcagagaacggatcttagaacagctttatttaagctggcgatgt
acagctggtgtgaagtcttaggaaagcagctttgtgagaagctaaaacag
catcctgtgtgtatacagacctccaaggccctacattccgcataggcttg
agagctctgtacacacaggaataaacagccttgtgtcctctaggcagtgt
gatcttctatagctcttacttctgacagtcagtcttcggagaactgtaat
caagtacagtcgtaagagcggtccctttctgccacagtgaagggcaagga
gatgtgattggaagaggggtaccaggaggactaaagtccttttaactaaa
atcagcattcaaacaagcacacctggctgaacaaagtcactccacctttg
catgtcgggggctgagagactagctacagggacaggcaaaataactgatc
atcctgacactggacaattctttgaagtttattgttgatttttaaaaact
ggattctaccttggtgggggggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_38984858_38985634
seq2: B6Ng01-038A08.g_67_843 (reverse)

seq1  CCCCCCTCCCCCACCAAGGTAGAATCCAGTTTTTAAAAATCAACAATAAA  50
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCCCCACCAAGGTAGAATCCAGTTTTTAAAAATCAACAATAAA  50

seq1  CTTCAAAGAATTGTCCAGTGTCAGGATGATCAGTTATTTTGCCTGTCCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAAGAATTGTCCAGTGTCAGGATGATCAGTTATTTTGCCTGTCCCT  100

seq1  GTAGCTAGTCTCTCAGCCCCCGACATGCAAAGGTGGAGTGACTTTGTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTAGTCTCTCAGCCCCCGACATGCAAAGGTGGAGTGACTTTGTTCA  150

seq1  GCCAGGTGTGCTTGTTTGAATGCTGATTTTAGTTAAAAGGACTTTAGTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGTGTGCTTGTTTGAATGCTGATTTTAGTTAAAAGGACTTTAGTCC  200

seq1  TCCTGGTACCCCTCTTCCAATCACATCTCCTTGCCCTTCACTGTGGCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGTACCCCTCTTCCAATCACATCTCCTTGCCCTTCACTGTGGCAGA  250

seq1  AAGGGACCGCTCTTACGACTGTACTTGATTACAGTTCTCCGAAGACTGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGACCGCTCTTACGACTGTACTTGATTACAGTTCTCCGAAGACTGAC  300

seq1  TGTCAGAAGTAAGAGCTATAGAAGATCACACTGCCTAGAGGACACAAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGAAGTAAGAGCTATAGAAGATCACACTGCCTAGAGGACACAAGGC  350

seq1  TGTTTATTCCTGTGTGTACAGAGCTCTCAAGCCTATGCGGAATGTAGGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATTCCTGTGTGTACAGAGCTCTCAAGCCTATGCGGAATGTAGGGC  400

seq1  CTTGGAGGTCTGTATACACACAGGATGCTGTTTTAGCTTCTCACAAAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAGGTCTGTATACACACAGGATGCTGTTTTAGCTTCTCACAAAGCT  450

seq1  GCTTTCCTAAGACTTCACACCAGCTGTACATCGCCAGCTTAAATAAAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCCTAAGACTTCACACCAGCTGTACATCGCCAGCTTAAATAAAGCT  500

seq1  GTTCTAAGATCCGTTCTCTGCAGCGGATCATCGTGTCTGTTATGAAAGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTAAGATCCGTTCTCTGCAGCGGATCATCGTGTCTGTTATGAAAGTA  550

seq1  AAGATACACTGAGGCTAGGCATCCCTTGCTACTTGGTCTCCTTATGAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATACACTGAGGCTAGGCATCCCTTGCTACTTGGTCTCCTTATGAGAA  600

seq1  TCTACAAGAAAAAAAAAAAAAGCTCAAGTAAAGAATTATAATCCTATGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACAAGAAAAAAAAAAAAAGCTCAAGTAAAGAATTATAATCCTATGTA  650

seq1  TGTTCTTAATCTCAGGGGCCTCGCTATTCTTAATTATTTGTTCCCATCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTAATCTCAGGGGCCTCGCTATTCTTAATTATTTGTTCCCATCTT  700

seq1  TTCTTTGGCTGCCAGGGAACTCAGTAAAGTTGTAGCATCGGCTAGCAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGGCTGCCAGGGAACTCAGTAAAGTTGTAGCATCGGCTAGCAATT  750

seq1  ATACCTGACTATGGTATGTGTGAATTC  777
      |||||||||||||||||||||||||||
seq2  ATACCTGACTATGGTATGTGTGAATTC  777