BAC Information

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BAC

Clone NameB6Ng01-038A20
Chromosome10 (Build37)
Map Location 104,053,954 - 104,054,471
singlet/doubletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-038A20.bB6Ng01-038A20.g
ACCDH865736DH865737
length1,0891,170
definitionDH865736|Mus musculus domesticus DNA, BAC clone: B6Ng01-038A20, 5' end.DH865737|Mus musculus domesticus DNA, BAC clone: B6Ng01-038A20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatttgtttaattttgttcagtatatcttctggaaaaaaattaaa
ttctttttaagaaaatgtgagggataaataaataattgtggtgagtgtgc
gtagatttgttcattttatttgtttcccaccatgttgaatcattaattgt
gcatgaccttttacagatttggagatttgaatcaacacacagcttaattt
atatatctatatttattatattttattgaaaatatatttttctcataaaa
tatatcctgattatgccttcccctaacttctcatctccatgttcctccca
atctaccctcccatctggatcgtgtaggcttagatgttttaaaatatatt
ttaataagggttcttaaatacccgaaccttccttctagcccatcacatac
aagaggtagtagaaaagaaatgttattaggctacaggggaagtagacctg
tttagaaatagctttttaagggtgattaaaatctttgttttctcttacag
aagctttgcaaagacaaaagacactgtcaataatacaaaaagctaccaac
agattgggaaaggatctttacctatcctaaatcagataggggactaatat
ccaatatatataaagaactcaagaaggtggaattcacaaaatcaaataac
cccattaaaaaatggggctcagagctaaacaaagaattctcacctgagga
atactgaatggctgagaagcacctgaaaaaatgttcagcatccttaatca
tcagggaaataaaaatcaaaacaaccctgagattctgcctcacacaagcc
agcatgactaagatcaaaaattcagtgacagcagatgctggcaaggatat
ggagaaagagtaacactcctccattgttggtgggattgcaagattgtaca
accactctgtgaatcagtctgtttgttcctcaaaaattggacatagtgct
accagaggatcccacataacttctcctgtacatatatccagaagatattc
caaacagtaagaagtacacatgcaaaactatgttcatagcagcattattg
taatagccagaagctggaagaacccagatgcccctcaac

gaattctcacccgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggtccctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagccattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgcttacagtcagctaatggatggatcatagggctccca
atggaggagctagagaagtagccaaggagctaaagggatctgcatcctta
tagtgggacacattatgactaccagtaccccggagctcttgacctctagc
tgcatatataatcaaagatggcctagtcgcatcactgcagagagcccatt
ggactgtcaacttatatgccagtacaggaacctaggcaaaaggggatggc
tggcgagtggagtgtgtcgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053954_104054471
seq2: B6Ng01-038A20.b_613_1126 (reverse)

seq1  GTTGAGGGGCATCTGGGTTCTTTCCAGCTCCTGGCTATTATAAATAAGGC  50
      |||||||||||||||||||| |||||||| ||||||||||  ||||| ||
seq2  GTTGAGGGGCATCTGGGTTC-TTCCAGCTTCTGGCTATTA-CAATAATGC  48

seq1  TGCTATGAATATAGTGGAGCATGTGTCCTTCTTACCGGTTGGGGCATCTT  100
      ||||||||| |||||   |||||||| |||||||| | ||||   |||||
seq2  TGCTATGAACATAGTTTTGCATGTGTACTTCTTACTGTTTGGAATATCTT  98

seq1  CTGGATATATGCCCAGAAGAGGTATTGCTGGATCCTCCGGTAGTACTATG  150
      |||||||||||  ||| ||| ||  ||  |||||||| ||||| ||||||
seq2  CTGGATATATGTACAGGAGAAGTTATGTGGGATCCTCTGGTAGCACTATG  148

seq1  TCCAATTTTCTGACGAACCGCCAGACGGATTTCCAGAGTGGTTGTACAAG  200
      ||||||||| ||| ||||   ||||| ||||  |||||||||||||||| 
seq2  TCCAATTTT-TGAGGAACAAACAGACTGATTCACAGAGTGGTTGTACAAT  197

seq1  CCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCCACATCCTC  250
      | ||||||||||||||||||||||||||||| ||||||||||| ||||| 
seq2  CTTGCAATCCCACCAACAATGGAGGAGTGTTACTCTTTCTCCATATCCTT  247

seq1  GCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCATTCTGACTGGT  300
      ||||||||||||||||| |||||||||||||||||| ||| ||| || ||
seq2  GCCAGCATCTGCTGTCA-CTGAATTTTTGATCTTAGTCATGCTGGCTTGT  296

seq1  GTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCCCTGATGATTAA  350
      ||||||  |||||||||||||||||||||||  |||||||||||||||||
seq2  GTGAGGCAGAATCTCAGGGTTGTTTTGATTTTTATTTCCCTGATGATTAA  346

seq1  GGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCGGTATTCCTCAG  400
      ||||| |||||||||||||||||||||||| ||||||| |||||||||||
seq2  GGATGCTGAACATTTTTTCAGGTGCTTCTCAGCCATTCAGTATTCCTCAG  396

seq1  GTGAGAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATAGGGTTATTT  450
      |||||||||||||||| || |||||||||||||||||||| |||||||||
seq2  GTGAGAATTCTTTGTTTAGCTCTGAGCCCCATTTTTTAATGGGGTTATTT  446

seq1  GATTTTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAG  500
      |||||| |||| |||||||||||||||||||||||||| |||||||||||
seq2  GATTTTGTGAATTCCACCTTCTTGAGTTCTTTATATATATTGGATATTAG  496

seq1  TCCCCTATCTGAATTAGG  518
      |||||||||||| |||||
seq2  TCCCCTATCTGATTTAGG  514


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