BAC Information

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BAC

Clone NameB6Ng01-038J21
Chromosome10 (Build37)
Map Location 28,853,025 - 28,853,741
singlet/doubletsinglet
Overlap genenone
Upstream genePtprk, E430004N04Rik, 4930519F09Rik, 2310057J18Rik, LOC432447
Downstream gene6330407J23Rik, Echdc1, Rnf146, Rspo3, EG630389, Rpl12, LOC623064, LOC674389, Gm232, LOC667696
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-038J21.bB6Ng01-038J21.g
ACCDH866128DH866129
length894998
definitionDH866128|Mus musculus domesticus DNA, BAC clone: B6Ng01-038J21, 5' end.DH866129|Mus musculus domesticus DNA, BAC clone: B6Ng01-038J21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgtatatgtggctatcttctttatgtttgttgaaagattacttt
cttgatttatttgagcttagtttccctctttgtgttggatttttcccttt
attattctttgaaggaatggatttgtggaaagacattgtgtaagtttgat
tttgtcatggaacaccctggtttctccatctatggtaattgagagttttg
ctaggcatagtggcctggactggcatttgtgttctcttagggtctgtatg
acctctgctcagcatcttctggctttcatagtctctggggagaagttggg
tgtaattctaataggccttccttcatatgttacttgacctttttccctta
ctgcttttaatattctttctttggtttgtgcatttggtgttttgattatt
atgtgatgggaggaatttcttttctggtctaaactacttggagttctgta
gatttcttgtatgttcatgggcatccatttctttagtttcgggatgtttt
cttctataattttgttgaagatatttattggccctttaagttggaaatct
tcctcctcatctatacctattatccttaggtttggtctactcattgtgtc
ctggatttccaggatgttttgagttaggatctttttgcattttgtatttt
ctttgattgttgtgtcaatgtttttctatggtatattctgcacctgagat
tctctctttctatctcttgtattctgttgggttatgcttgtatcaatggc
tcctgacttcttttcttaagtttttctatttccagagtggtctccctttg
tgattctttattgtttctatttctatttttaggtggatgggtttgttcaa
ttcctccacctgttaaatgtgtcctcctggaattctctaaagga
gaattcagcatgagattcagaatcatgctgaactcgatgtaatacaatct
gagtagcctacttaaaagtagaaagatgaatatcaatgtctacagcccaa
ggacagtgtgatttgttattattttaagtattgtccacagaaaaaatttg
gtgtgtgacaacatgctagtaaagctctggacaatgacacttttcccaga
taaagaactcttgaaagaggcaaaagacaccgtcaataagataaaaagac
caccaacagattgggaaaggatctttacctatccttaatcagatagggga
ctattatccaatatatataaagaactcaagaaggttgactccagaaaatc
aaataaccccattaaaaaatggggcttgggctggagagatggctcagccg
ttaaaggctaggctcacaaccaaaaatataaaaatggggctcagagctga
acaaagaattctcacctgaggaatactgaatggcagagaagcacctgaaa
aaatgttcaacatccttaatcagcagggaaatgcaaatcaaaacaaccct
gagattccacctcacaccagtcagaatggctaagatcaaaaattcaggtg
acagcagatgctggcgtggatgtggagaaagaggaacactcctccattgt
tggtgagattgcaagcttgtacaaccactttggaaatcagtctggcggtt
ccttagaaaattggacatagtactaccggaggatctagcaatacctctcc
tgggcatatatccagaagatgtcccaaccggtaagaaggacacatgttcc
actatgttcatagcagccttatttataatagccagaagctggaaagaacc
caggtgcccctcaacagaggaatggatacagaaaatgtggtatatttaca
caatggagtactactcagctattaaaagatgatttatgaaattctagcaa
atggatggacctggagggcatcatcctgagtgagtacacatcacaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_28853025_28853741
seq2: B6Ng01-038J21.g_66_782

seq1  GAATTCAGCATGAGATTCAGAATCATGCTGAACTCGATGTAATACAATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCATGAGATTCAGAATCATGCTGAACTCGATGTAATACAATCT  50

seq1  GAGTAGCCTACTTAAAAGTAGAAAGATGAATATCAATGTCTACAGCCCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGCCTACTTAAAAGTAGAAAGATGAATATCAATGTCTACAGCCCAA  100

seq1  GGACAGTGTGATTTGTTATTATTTTAAGTATTGTCCACAGAAAAAATTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGTGTGATTTGTTATTATTTTAAGTATTGTCCACAGAAAAAATTTG  150

seq1  GTGTGTGACAACATGCTAGTAAAGCTCTGGACAATGACACTTTTCCCAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGACAACATGCTAGTAAAGCTCTGGACAATGACACTTTTCCCAGA  200

seq1  TAAAGAACTCTTGAAAGAGGCAAAAGACACCGTCAATAAGATAAAAAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAACTCTTGAAAGAGGCAAAAGACACCGTCAATAAGATAAAAAGAC  250

seq1  CACCAACAGATTGGGAAAGGATCTTTACCTATCCTTAATCAGATAGGGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAACAGATTGGGAAAGGATCTTTACCTATCCTTAATCAGATAGGGGA  300

seq1  CTATTATCCAATATATATAAAGAACTCAAGAAGGTTGACTCCAGAAAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTATCCAATATATATAAAGAACTCAAGAAGGTTGACTCCAGAAAATC  350

seq1  AAATAACCCCATTAAAAAATGGGGCTTGGGCTGGAGAGATGGCTCAGCCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAACCCCATTAAAAAATGGGGCTTGGGCTGGAGAGATGGCTCAGCCG  400

seq1  TTAAAGGCTAGGCTCACAACCAAAAATATAAAAATGGGGCTCAGAGCTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGGCTAGGCTCACAACCAAAAATATAAAAATGGGGCTCAGAGCTGA  450

seq1  ACAAAGAATTCTCACCTGAGGAATACTGAATGGCAGAGAAGCACCTGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGAATTCTCACCTGAGGAATACTGAATGGCAGAGAAGCACCTGAAA  500

seq1  AAATGTTCAACATCCTTAATCAGCAGGGAAATGCAAATCAAAACAACCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTCAACATCCTTAATCAGCAGGGAAATGCAAATCAAAACAACCCT  550

seq1  GAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTG  600

seq1  ACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAACACTCCTCCATTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAACACTCCTCCATTGT  650

seq1  TGGTGAGATTGCAAGCTTGTACAACCACTTTGGAAATCAGTCTGGCGGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGAGATTGCAAGCTTGTACAACCACTTTGGAAATCAGTCTGGCGGTT  700

seq1  CCTTAGAAAATTGGACA  717
      |||||||||||||||||
seq2  CCTTAGAAAATTGGACA  717