BAC Information

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BAC

Clone NameB6Ng01-039D04
Chromosome10 (Build37)
Map Location 22,329,271 - 22,448,437
singlet/doubletdoublet
Overlap geneSlc2a12, Tbpl1
Upstream gene1700020N01Rik, EG432436, LOC100039936, LOC628133, Sgk, LOC667254, LOC665523, 4930444G20Rik, LOC100039992, E030030I06Rik, LOC665543, Ube2q2l, Raet1e, LOC100040023, LOC100038830, LOC667280, EG667281, LOC432438, Raet1d, LOC667299, LOC667303, LOC100040072, LOC100040078
Downstream geneTcf21, Eya4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-039D04.bB6Ng01-039D04.g
ACCDH866534DH866535
length1,098583
definitionDH866534|Mus musculus domesticus DNA, BAC clone: B6Ng01-039D04, 5' end.DH866535|Mus musculus domesticus DNA, BAC clone: B6Ng01-039D04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,447,329 - 22,448,437)(22,329,271 - 22,329,853)
sequence
gaattcactataatgtacaacagatcatgggacacaactgaatattttga
aatttcatttctcatcagaaatgtgacattatttaaaaggtagcaaattc
tgtataatgtcgttgaatagacatgaggatgttttaaacaccaagtaagt
aaccttggtgactaatttctttctgttgcatcagcaaccatgtgatgaaa
ttattactatgaagagtaagtttaaattgattttggaagagtttagagta
gaaagttaaccatgtttccaaattaaagcttttagtgtcaagatttttag
ctgacatttgagctataaaattttcctgaagtttctgtccattttacttc
acaccttttttttgactggtgccacttgaagtgtactttttgtgtgtgtg
tagctgacagagaagtgacagacatgggtaacataacggttgtgaatttg
agtgtcagatattgtattacatatgctctggtactataactgttggttta
tagataccatcatgcctgatacaagaagcttctagaaggtcagcactgag
tcgtcaccatattgtgtgttttgaagattgactgtttactaacctgttga
ttttactgattaggggcttttctatcggacaaaggaaaacttatgttgtg
tgctggagcctgagccctgagaagagacttctgacacctaattcttcctg
tgtcatgtctgtctgttactctctgtgtagtggtgcatttataggcacca
gcccgtcagaggcatgattcgggctgttttaatgaatccaagcactagaa
agaagggctgactgctccccccttgagcaggagacacaggattgtggcat
ctttggagtacactgtggaagagatgccttctgtcttttctttagaagga
tgtggatatgtgctgtttataggtgtgaaaagcaagattctaggagtatg
tcatcggtggtaaatagtcagaccacatagggaattctgctcacttgtct
tacttgtgactaatgctacatagagatatttttcttgatgactgggttta
tttcaggaacatgttacaggaatcttattaaatgtggaaacattacat
gaattccaagatttcatctgccttacctcaaggtgtctcttagttgaaag
aagtcttctctacatgtcccagggctaggctgggagcctgggcctgcaac
agaacccagaagaacccagcttctggggttttgtttgtgtttttttgttt
gttttttggagtttttttttttttttttttttttttttttttttcgagat
agggtttctctgtgtagccctggctgtcctggaactcactttgtaaacca
ggctggcctcgaactcaaaaatccgcctgtctctgcctccaggcaggatc
cagtgctaggattaaaggggtgcaccaccccgaccagctcaaacccagct
tctggcaaaggctccaacattcactgtattgccatcttggaattttctta
ggttaatgaagtctctagtgaatcttataatttagggatcgatgttttgt
ttaaaggcaaaaagagagtagaaaaacaaaacaaaacaagaatctggtta
cttaaccagagattctttgaaagtcctcaaacgtgcaggtgtagtaactg
aaagaaaattgctctgagcatccatgcttgatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_22447329_22448437
seq2: B6Ng01-039D04.b_46_1143 (reverse)

seq1  ATGTAATGTTTCAACATTTAATAAGATTCCTGGTAACATGTTTCCTGACA  50
      |||||||||||| |||||||||||||||||| |||||||| ||||||| |
seq2  ATGTAATGTTTCCACATTTAATAAGATTCCT-GTAACATG-TTCCTGAAA  48

seq1  TAAACCCAGTCATTCAAGATAAATTATCTTCTATGTTAGCATTTAGTCAC  100
      |||||||||||| |||||| ||| |||| |||||| ||||| ||||||||
seq2  TAAACCCAGTCA-TCAAGA-AAAATATC-TCTATG-TAGCA-TTAGTCAC  93

seq1  AGGTAAGACCAGGTGAGCAGAATTCCCTATGTGGTCTGACTATTTACCAC  150
      | |||||| || ||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAGA-CAAGTGAGCAGAATTCCCTATGTGGTCTGACTATTTACCAC  142

seq1  CGATGACATACTCCTAGAATCTTGCTTTTTCACACCTATAAAACAGCACA  200
      ||||||||||||||||||||||||| ||||||||||||| ||||||||||
seq2  CGATGACATACTCCTAGAATCTTGC-TTTTCACACCTAT-AAACAGCACA  190

seq1  TATCCACATTCCTTCTAAAGAAAAGACAGAAGGCATCTCTTCCACAGTGT  250
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TATCCACA-TCCTTCTAAAGAAAAGACAGAAGGCATCTCTTCCACAGTGT  239

seq1  ACTCCAAAGATGCCACAATCCTGTGTCTCCTGCTCAAGGGGGGAGCAGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAAAGATGCCACAATCCTGTGTCTCCTGCTCAAGGGGGGAGCAGTC  289

seq1  AGCCCTTCTTTCTAGTGCTTGGATTCATTAAAACAGCCCGAATCATGCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTTCTTTCTAGTGCTTGGATTCATTAAAACAGCCCGAATCATGCCT  339

seq1  CTGACGGGCTGGTGCCTATAAATGCACCACTACACAGAGAGTAACAGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACGGGCTGGTGCCTATAAATGCACCACTACACAGAGAGTAACAGACA  389

seq1  GACATGACACAGGAAGAATTAGGTGTCAGAAGTCTCTTCTCAGGGCTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGACACAGGAAGAATTAGGTGTCAGAAGTCTCTTCTCAGGGCTCAG  439

seq1  GCTCCAGCACACAACATAAGTTTTCCTTTGTCCGATAGAAAAGCCCCTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCAGCACACAACATAAGTTTTCCTTTGTCCGATAGAAAAGCCCCTAA  489

seq1  TCAGTAAAATCAACAGGTTAGTAAACAGTCAATCTTCAAAACACACAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTAAAATCAACAGGTTAGTAAACAGTCAATCTTCAAAACACACAATA  539

seq1  TGGTGACGACTCAGTGCTGACCTTCTAGAAGCTTCTTGTATCAGGCATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGACGACTCAGTGCTGACCTTCTAGAAGCTTCTTGTATCAGGCATGA  589

seq1  TGGTATCTATAAACCAACAGTTATAGTACCAGAGCATATGTAATACAATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATCTATAAACCAACAGTTATAGTACCAGAGCATATGTAATACAATA  639

seq1  TCTGACACTCAAATTCACAACCGTTATGTTACCCATGTCTGTCACTTCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACACTCAAATTCACAACCGTTATGTTACCCATGTCTGTCACTTCTC  689

seq1  TGTCAGCTACACACACACAAAAAGTACACTTCAAGTGGCACCAGTCAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGCTACACACACACAAAAAGTACACTTCAAGTGGCACCAGTCAAAA  739

seq1  AAAAGGTGTGAAGTAAAATGGACAGAAACTTCAGGAAAATTTTATAGCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGTGTGAAGTAAAATGGACAGAAACTTCAGGAAAATTTTATAGCTC  789

seq1  AAATGTCAGCTAAAAATCTTGACACTAAAAGCTTTAATTTGGAAACATGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTCAGCTAAAAATCTTGACACTAAAAGCTTTAATTTGGAAACATGG  839

seq1  TTAACTTTCTACTCTAAACTCTTCCAAAATCAATTTAAACTTACTCTTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTTTCTACTCTAAACTCTTCCAAAATCAATTTAAACTTACTCTTCA  889

seq1  TAGTAATAATTTCATCACATGGTTGCTGATGCAACAGAAAGAAATTAGTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAATAATTTCATCACATGGTTGCTGATGCAACAGAAAGAAATTAGTC  939

seq1  ACCAAGGTTACTTACTTGGTGTTTAAAACATCCTCATGTCTATTCAACGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGGTTACTTACTTGGTGTTTAAAACATCCTCATGTCTATTCAACGA  989

seq1  CATTATACAGAATTTGCTACCTTTTAAATAATGTCACATTTCTGATGAGA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATACAGAATTTGCTACCTTTTAAATAATGTCACATTTCTGATGAGA  1039

seq1  AATGAAATTTCAAAATATTCAGTTGTGTCCCATGATCTGTTGTACATTAT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAATTTCAAAATATTCAGTTGTGTCCCATGATCTGTTGTACATTAT  1089

seq1  AGTGAATTC  1109
      |||||||||
seq2  AGTGAATTC  1098

seq1: chr10_22329271_22329853
seq2: B6Ng01-039D04.g_68_650

seq1  GAATTCCAAGATTTCATCTGCCTTACCTCAAGGTGTCTCTTAGTTGAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGATTTCATCTGCCTTACCTCAAGGTGTCTCTTAGTTGAAAG  50

seq1  AAGTCTTCTCTACATGTCCCAGGGCTAGGCTGGGAGCCTGGGCCTGCAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTTCTCTACATGTCCCAGGGCTAGGCTGGGAGCCTGGGCCTGCAAC  100

seq1  AGAACCCAGAAGAACCCAGCTTCTGGGGTTTTGTTTGTGTTTTTTTGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCCAGAAGAACCCAGCTTCTGGGGTTTTGTTTGTGTTTTTTTGTTT  150

seq1  GTTTTTTGGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTGGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGAGAT  200

seq1  AGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTTTGTAGACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTTTGTAAACCA  250

seq1  GGCTGGCCTCGAACTCAGAAATCCGCCTGTCTCTGCCTCCAGGCAGGATC  300
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GGCTGGCCTCGAACTCAAAAATCCGCCTGTCTCTGCCTCCAGGCAGGATC  300

seq1  CAGTGCTAGGATTAAAGGTGTGCACCACCACGACCAGCTCAAACCCAGCT  350
      |||||||||||||||||| |||||||||| ||||||||||||||||||||
seq2  CAGTGCTAGGATTAAAGGGGTGCACCACCCCGACCAGCTCAAACCCAGCT  350

seq1  TCTGGCAAAGGCTCCAACATTCACTGTATTGCCATCTTGGAATTTTCTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCAAAGGCTCCAACATTCACTGTATTGCCATCTTGGAATTTTCTTA  400

seq1  GGTTAATGAAGTCTCTAGTGAATCTTATAATTTAGGGATCGATGTTTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAATGAAGTCTCTAGTGAATCTTATAATTTAGGGATCGATGTTTTGT  450

seq1  TTAAAGGCAAAAAGAGAGTAGAAAAACAAAACAAAACAAGAATCTGGTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGGCAAAAAGAGAGTAGAAAAACAAAACAAAACAAGAATCTGGTTA  500

seq1  CTTAACCAGAGATTCTTTGAAAGTCCTCAGACGTGCAGGTGTAGTAACTG  550
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CTTAACCAGAGATTCTTTGAAAGTCCTCAAACGTGCAGGTGTAGTAACTG  550

seq1  AAAGAGAATTGCTCTGAGCATCCATGCTTGATT  583
      ||||| |||||||||||||||||||||||||||
seq2  AAAGAAAATTGCTCTGAGCATCCATGCTTGATT  583