BAC Information

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BAC

Clone NameB6Ng01-039O05
Chromosome10 (Build37)
Map Location 10,012,246 - 10,120,429
singlet/doubletdoublet
Overlap geneLOC665110, 9130014G24Rik
Upstream geneLOC666636, E130306M17Rik, LOC666658, LOC620417, Stxbp5, LOC100039238
Downstream geneRab32, EG382450, Grm1, Shprh, Fbxo30, Epm2a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-039O05.bB6Ng01-039O05.g
ACCDH867024DH867025
length1,0891,121
definitionDH867024|Mus musculus domesticus DNA, BAC clone: B6Ng01-039O05, 5' end.DH867025|Mus musculus domesticus DNA, BAC clone: B6Ng01-039O05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(10,119,333 - 10,120,429)(10,012,246 - 10,013,391)
sequence
gaattcacacctatgctacgaaggccagcgtggtgcgcctgcctgccggg
tatggtctgacatcatgtttccttgtttgaggcgtttaggtagacaatgg
ggagtctaccttattgttttctgaagtaagattcaacaaggtacctgtct
atcattgggattcttgagagaaagagagagaatcctttcaataagtgata
ttctcagggcctttggaaggatctttgttgcacatccagggactgtatat
gtaaagaacatggcttaacccagaattttctaaaatgaatctgtcaataa
tttctctagtattctcataaatcttactattttttaacaagaattctaca
tgattctgcttaaatttggattccatttagattataaaatagcatttctt
cctaccaacctagaattccacctgtggtatattgttgttcgatgttattt
ttatttataataaaactgggcaaacacatcacactttctgtttgaaagaa
attataaaccatgaaagcattgtattgatttttagcatataaaatttcat
acttcaaatggaaaatattttactggaattttatcctgagatcaatcttt
ttaattatatgccatcagtgaaaagttatagactgtgcagaaagcaggtc
ctaagcaacaaaacaaaatgctaaagaaatgtgtgctatgcatccagaat
gtctaaaaaataaaataaaatctaaaaaagaaaatcaaatttctcagtct
agtctttgtatggagagattctccagaaaccaaattaattctctaattca
gtgggtctcagccttcctaatgtttattccgtgggtctcagccttcctaa
tgttaattccgtgggtctcagccttcctatgttattccgtgggtctcagc
ctccaaacgctctgaacctttattacagttccttacattatggtgacttc
tcaccataaaatatttgtgtttctacttcatactataatttgctactgta
agaatagtaatgtagatatctcatatgcaggatgtctactggggtgaccc
ctgtaaaaagggttgttgacccaaagggtttcacaaccc
gaattctctgtttagctctgtttcccattttttttaatagggctatttgg
ctctctggagtcaaaaagttggtttttaaagctgtggcatagtcataaga
cagaactcgatcacctgaaaggaacatttgggacttgttttgtgttctgt
ttgcaagtctagttttcaaaacctgggtttggggcaggttgtatttagtt
tcgttgtcactcattaagtataaaatttaaaacttacacaaattctgtta
cttctttgagtcttatttttcttatctttaaaatgagactaatctgcttg
gaatgccttaaaaactgtgagatattacgcattatctcatagcaatcaaa
atttaatgtactttttgcagtttgatatggctatcaggttaacgctttcc
ccttcactggctgcaaaatttgttctttaaaatttttctacttttgggat
gatattaaagaaaatatatcatttcataacaaacatcggcttctgattcc
cctaaaaagatcagaattttgtttgcagcagtgaaccagtatatttacca
tctcttggcacattcttctttcctctttggaaattccccatccaaaaacc
taccagaatttcccaacagacatcttcccctcaatcacttacaagcatcc
ctctgtctgaccctggaataggtcaacattgtctttctgccggtttgcta
taggctacatcatttctgaaagctaggagtagagaagagtgaaatatatg
tatccacaggacgagtggtagtaagaaagcagtgatgtcatcaggctgtt
gctgaggactttatgtctttcaaggtgctgacagtctccctgtagttatt
cctccttttttcttttcatttatttttctctcatgcgaagcatcctgacc
acagcctctcctccctctgccctcctcttccccttcctttcttttcccag
atcactgttctccatttcccacaggaagagagtaggcttccatgggatat
caccaacccaccatagagattcagtaactagcacagtccctcgattcggg
ctgaaaagtacccagtcagaagaagggtccagaaaggaaagagttgagac
aaccccctctacttagagtcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_10119333_10120429
seq2: B6Ng01-039O05.b_45_1133 (reverse)

seq1  GGGTTGTGAACCCTTTTGGGTCAACCAACCTTTTTTTACAGGGGTCA-CC  49
      |||||||||| || ||||||||||| | ||  ||||||||||||||| ||
seq2  GGGTTGTGAAACCCTTTGGGTCAACAACCC--TTTTTACAGGGGTCACCC  48

seq1  CAGTAGACATCCTGCATATGAGATATCTACATTACTATTCTTAACAGTAG  99
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CAGTAGACATCCTGCATATGAGATATCTACATTACTATTCTT-ACAGTAG  97

seq1  CAAAATTATAGTTATGAAGTAGAAACACAAATATTTTATGGTTGAGAAGT  149
      | ||||||||| ||||||||||||||||||||||||||||| ||||||||
seq2  C-AAATTATAG-TATGAAGTAGAAACACAAATATTTTATGG-TGAGAAGT  144

seq1  CACCATAATGTAAGGAACTGTAATAAAGGTTCAGAGCGTTTGGAAGGCTG  199
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CACCATAATGTAAGGAACTGTAATAAAGGTTCAGAGCGTTTGG-AGGCTG  193

seq1  AGACCCACGGAATTAACATTAGGAAGGCTGAGACCCACGGAATTAACATT  249
      |||||||||||| ||||| |||||||||||||||||||||||||||||||
seq2  AGACCCACGGAA-TAACA-TAGGAAGGCTGAGACCCACGGAATTAACATT  241

seq1  AGGAAGGCTGAGACCCACGGAATTAACATTAGGAAGGCTGAGACCCACTG  299
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AGGAAGGCTGAGACCCACGGAATAAACATTAGGAAGGCTGAGACCCACTG  291

seq1  AATTAGAGAATTAATTTGGTTTCTGGAGAATCTCTCCATACAAAGACTAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGAGAATTAATTTGGTTTCTGGAGAATCTCTCCATACAAAGACTAG  341

seq1  ACTGAGAAATTTGATTTTCTTTTTTAGATTTTATTTTATTTTTTAGACAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGAAATTTGATTTTCTTTTTTAGATTTTATTTTATTTTTTAGACAT  391

seq1  TCTGGATGCATAGCACACATTTCTTTAGCATTTTGTTTTGTTGCTTAGGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGATGCATAGCACACATTTCTTTAGCATTTTGTTTTGTTGCTTAGGA  441

seq1  CCTGCTTTCTGCACAGTCTATAACTTTTCACTGATGGCATATAATTAAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTTTCTGCACAGTCTATAACTTTTCACTGATGGCATATAATTAAAA  491

seq1  AGATTGATCTCAGGATAAAATTCCAGTAAAATATTTTCCATTTGAAGTAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGATCTCAGGATAAAATTCCAGTAAAATATTTTCCATTTGAAGTAT  541

seq1  GAAATTTTATATGCTAAAAATCAATACAATGCTTTCATGGTTTATAATTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTTTATATGCTAAAAATCAATACAATGCTTTCATGGTTTATAATTT  591

seq1  CTTTCAAACAGAAAGTGTGATGTGTTTGCCCAGTTTTATTATAAATAAAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAAACAGAAAGTGTGATGTGTTTGCCCAGTTTTATTATAAATAAAA  641

seq1  ATAACATCGAACAACAATATACCACAGGTGGAATTCTAGGTTGGTAGGAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACATCGAACAACAATATACCACAGGTGGAATTCTAGGTTGGTAGGAA  691

seq1  GAAATGCTATTTTATAATCTAAATGGAATCCAAATTTAAGCAGAATCATG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGCTATTTTATAATCTAAATGGAATCCAAATTTAAGCAGAATCATG  741

seq1  TAGAATTCTTGTTAAAAAATAGTAAGATTTATGAGAATACTAGAGAAATT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATTCTTGTTAAAAAATAGTAAGATTTATGAGAATACTAGAGAAATT  791

seq1  ATTGACAGATTCATTTTAGAAAATTCTGGGTTAAGCCATGTTCTTTACAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGACAGATTCATTTTAGAAAATTCTGGGTTAAGCCATGTTCTTTACAT  841

seq1  ATACAGTCCCTGGATGTGCAACAAAGATCCTTCCAAAGGCCCTGAGAATA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGTCCCTGGATGTGCAACAAAGATCCTTCCAAAGGCCCTGAGAATA  891

seq1  TCACTTATTGAAAGGATTCTCTCTCTTTCTCTCAAGAATCCCAATGATAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTATTGAAAGGATTCTCTCTCTTTCTCTCAAGAATCCCAATGATAG  941

seq1  ACAGGTACCTTGTTGAATCTTACTTCAGAAAACAATAAGGTAGACTCCCC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTACCTTGTTGAATCTTACTTCAGAAAACAATAAGGTAGACTCCCC  991

seq1  ATTGTCTACCTAAACGCCTCAAACAAGGAAACATGATGTCAGACCATACC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCTACCTAAACGCCTCAAACAAGGAAACATGATGTCAGACCATACC  1041

seq1  CGGCAGGCAGGCGCACCACGCTGGCCTTCGTAGCATAGGTGTGAATTC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCAGGCAGGCGCACCACGCTGGCCTTCGTAGCATAGGTGTGAATTC  1089

seq1: chr10_10012246_10013391
seq2: B6Ng01-039O05.g_67_1187

seq1  GAATTCTCTGTTTAGCTCTGTTTCCCATTTTTTTTAATAGGGCTATTTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGTTTAGCTCTGTTTCCCATTTTTTTTAATAGGGCTATTTGG  50

seq1  CTCTCTGGAGTCAAAAAGTTGGTTTTTAAAGCTGTGGCATAGTCATAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGGAGTCAAAAAGTTGGTTTTTAAAGCTGTGGCATAGTCATAAGA  100

seq1  CAGAACTCGATCACCTGAAAGGAACATTTGGGACTTGTTTTGTGTTCTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACTCGATCACCTGAAAGGAACATTTGGGACTTGTTTTGTGTTCTGT  150

seq1  TTGCAAGTCTAGTTTTCAAAACCTGGGTTTGGGGCAGGTTGTATTTAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAAGTCTAGTTTTCAAAACCTGGGTTTGGGGCAGGTTGTATTTAGTT  200

seq1  TCGTTGTCACTCATTAAGTATAAAATTTAAAACTTACACAAATTCTGTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTGTCACTCATTAAGTATAAAATTTAAAACTTACACAAATTCTGTTA  250

seq1  CTTCTTTGAGTCTTATTTTTCTTATCTTTAAAATGAGACTAATCTGCTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTGAGTCTTATTTTTCTTATCTTTAAAATGAGACTAATCTGCTTG  300

seq1  GAATGCCTTAAAAACTGTGAGATATTACGCATTATCTCATAGCAATCAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCCTTAAAAACTGTGAGATATTACGCATTATCTCATAGCAATCAAA  350

seq1  ATTTAATGTACTTTTTGCAGTTTGATATGGCTATCAGGTTAACGCTTTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATGTACTTTTTGCAGTTTGATATGGCTATCAGGTTAACGCTTTCC  400

seq1  CCTTCACTGGCTGCAAAATTTGTTCTTTAAAATTTTTCTACTTTTGGGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCACTGGCTGCAAAATTTGTTCTTTAAAATTTTTCTACTTTTGGGAT  450

seq1  GATATTAAAGAAAATATATCATTTCATAACAAACATCGGCTTCTGATTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTAAAGAAAATATATCATTTCATAACAAACATCGGCTTCTGATTCC  500

seq1  CCTAAAAAGATCAGAATTTTGTTTGCAGCAGTGAACCAGTATATTTACCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAAAAGATCAGAATTTTGTTTGCAGCAGTGAACCAGTATATTTACCA  550

seq1  TCTCTTGGCACATTCTTCTTTCCTCTTTGGAAATTCCCCATCCAAAAACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTGGCACATTCTTCTTTCCTCTTTGGAAATTCCCCATCCAAAAACC  600

seq1  TACCAGAATTTCCCAACAGACATCTTCCCCTCAATCACTTACAAGCATCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGAATTTCCCAACAGACATCTTCCCCTCAATCACTTACAAGCATCC  650

seq1  CTCTGTCTGACCCTGGAATAGGTCAACATTGTCTTTCTGCCGGTTTGCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCTGACCCTGGAATAGGTCAACATTGTCTTTCTGCCGGTTTGCTA  700

seq1  TAGGCTACATCATTTCTGAAAGCTAGGAGTAGAGAAGAGTGAAATATATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTACATCATTTCTGAAAGCTAGGAGTAGAGAAGAGTGAAATATATG  750

seq1  TATCCACAGGACGAGTGGTAGTAAGAAAGCAGTGATGTCATCAGGCTGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCACAGGACGAGTGGTAGTAAGAAAGCAGTGATGTCATCAGGCTGTT  800

seq1  GCTGAGGACTTTATGTCTTTCAAGGTGCTGACAGTCTCCCTGTAGTTATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGGACTTTATGTCTTTCAAGGTGCTGACAGTCTCCCTGTAGTTATT  850

seq1  CCTCCTTTTTTCTTTTCATTTATTTTTCTCTCATGCGAAGCATCCTGACC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTTTTTTCTTTTCATTTATTTTTCTCTCATGCGAAGCATCCTGACC  900

seq1  ACAGCCTCTCCTCCCTCTGCCCCTCCTCTTCCCCTTCCTTTCTTTTCCCC  950
      ||||||||||||||||||| |||||||||||||||||||||||||| |||
seq2  ACAGCCTCTCCTCCCTCTG-CCCTCCTCTTCCCCTTCCTTTCTTTT-CCC  948

seq1  AGATCCACTGTTCCTCCATTTCCCACAGGAAGAGAGTAGGCTTCCATGGG  1000
      |||| ||||||| |||||||||||||||||||||||||||||||||||||
seq2  AGAT-CACTGTT-CTCCATTTCCCACAGGAAGAGAGTAGGCTTCCATGGG  996

seq1  ATATCAACCAAACACACCATAAGAAGATTCAGTAACTAGGCACAGTCCCT  1050
      ||||||  | ||| |||||||   |||||||||||||| |||||||||||
seq2  ATATCA--CCAACCCACCATA--GAGATTCAGTAACTA-GCACAGTCCCT  1041

seq1  CAGATTCGGGCTGGAAAAGGTAACCCAGTCAGAGGAAAGGGGTCCCAGGA  1100
      | |||||||||| ||||||   ||||||||||| |||  ||||||    |
seq2  C-GATTCGGGCT-GAAAAG--TACCCAGTCAGAAGAA--GGGTCC----A  1081

seq1  GAAGGAAAAGAGTTAGAGACAACCCCCTTCCTACTTTTAGGAGTCC  1146
      ||| | |||||||| |||||||||||||  ||||||    ||||||
seq2  GAAAGGAAAGAGTT-GAGACAACCCCCT--CTACTT---AGAGTCC  1121