BAC Information

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BAC

Clone NameB6Ng01-041M05
Chromosome10 (Build37)
Map Location 104,053,656 - 104,054,363
singlet/doubletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-041M05.bB6Ng01-041M05.g
ACCDH868332DH868333
length1,083489
definitionDH868332|Mus musculus domesticus DNA, BAC clone: B6Ng01-041M05, 5' end.DH868333|Mus musculus domesticus DNA, BAC clone: B6Ng01-041M05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagtacttgaaaaaatg
ttcaacatctttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaat
cagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccatccccataat
cagcatccaaacgctgacaccattgcatacactagcagattttatgaaag
gacccagatgtagctgtctcttgtgagactatgccggggcctagcaaaac
agagtggatgctcacagtcagctaatgatggatctagggctctcaatgga
ggagctagagaagatcccaggagtaaagggatctgcaccctttaggtgga
acacataatgactaacattccctcggactctgactctactgctattattc
aaaaagatggactattcggtactctgggaatag

tcacctgaggaataccgaatggcagagaagcacctgaaaaaatgttcaac
atccttaatcatcagggaaatgcaaatcaaaacaacactgagattccact
tcactccagatagaatggctatgatcaaaaactcaggtgacagcagatgc
tggcgaggatgtggagaaaggggaacactcctccattattggtgggattg
caagcttgtacaaccactctggaaatcagtctggcggttcctcagaaaat
tggacatagtactaccggaggatccagcaatacctctcctgggcatatat
ccagaagatgtcccaaccggtaagaagaacacatgctccactatgttcat
agcagccttatttataatagccagaagctggaaagaacccagatgcccct
caacagaggaatggatacagaaaatgtggtacatttacataatggaatac
tactcagctattaaaaaaatgaatttatgaaattcctag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053656_104054363
seq2: B6Ng01-041M05.g_71_565 (reverse)

seq1  CTAGGAATTTCATAAATTCATTCTTTTTAATAGCTCCATTTACATTTAAT  50
                                                        
seq2  --------------------------------------------------  0

seq1  TTAATTAATGTAATTACAATTAATTAATTTATTAATTAAATAATTTAATA  100
                                                        
seq2  --------------------------------------------------  0

seq1  ATTTAATTGATAAATTAATTTAATTAATTAATTTAATTAATTAAATTAAA  150
                                                        
seq2  --------------------------------------------------  0

seq1  TAATAATTTAATAATAAATTAAATATTTTAAAATTAATAATAATTTTATA  200
                                                        
seq2  --------------------------------------------------  0

seq1  AGTAAATAATTTAATTAATGTAATTTAATTAATGTAATTACATTACATTT  250
                     ||  | ||||| || ||| | |||   ||   |||
seq2  --------------CTA--GGAATTTCATAAAT-TCATT---TT---TTT  27

seq1  AATAGC----------TCCATTGTGTAAATGTACCACATTTTCTGTATCT  290
      ||||||          |||||| |||||||||||||||||||||||||| 
seq2  AATAGCTGAGTAGTATTCCATTATGTAAATGTACCACATTTTCTGTATCC  77

seq1  ATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTCCTGGCTATTATA  340
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCTATTATA  127

seq1  AATAAGGCTGCTATGAATATAGTGGAGCATGTGTCCTTCTTACCGGTTGG  390
      ||||||||||||||||| |||||||||||||||| |||||||||||||||
seq2  AATAAGGCTGCTATGAACATAGTGGAGCATGTGTTCTTCTTACCGGTTGG  177

seq1  GGCATCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATCCTCCGGTA  440
      | |||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GACATCTTCTGGATATATGCCCAGGAGAGGTATTGCTGGATCCTCCGGTA  227

seq1  GTACTATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCCAGAGTGGT  490
      ||||||||||||||||||||| |||||||||||| |||||||||||||||
seq2  GTACTATGTCCAATTTTCTGAGGAACCGCCAGACTGATTTCCAGAGTGGT  277

seq1  TGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCC  540
      ||||||||| |||||||||||||| |||||||||||||||| ||||||||
seq2  TGTACAAGCTTGCAATCCCACCAATAATGGAGGAGTGTTCCCCTTTCTCC  327

seq1  ACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCATTC  590
      |||||||||||||||||||||||||||||| ||||||||| |||||||||
seq2  ACATCCTCGCCAGCATCTGCTGTCACCTGAGTTTTTGATCATAGCCATTC  377

seq1  TGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCCCTG  640
      |  |||| |||| |||||||||||| ||||||||||||||||||||||||
seq2  TATCTGGAGTGAAGTGGAATCTCAGTGTTGTTTTGATTTGCATTTCCCTG  427

seq1  ATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCGGTA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCGGTA  477

seq1  TTCCTCAGGTGAGAATTC  708
      ||||||||||||||||||
seq2  TTCCTCAGGTGAGAATTC  495


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