BAC Information

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BAC

Clone NameB6Ng01-041P03
Chromosome10 (Build37)
Map Location 90,301,429 - 90,436,416
singlet/doubletdoublet
Overlap geneAnks1b
Upstream geneE530015N03Rik, LOC100043039, LOC544719
Downstream geneApaf1, 1200009F10Rik, Slc25a3, Tmpo, LOC100041769
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-041P03.bB6Ng01-041P03.g
ACCDH868461DH868462
length9181,110
definitionDH868461|Mus musculus domesticus DNA, BAC clone: B6Ng01-041P03, 5' end.DH868462|Mus musculus domesticus DNA, BAC clone: B6Ng01-041P03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(90,301,429 - 90,302,346)(90,435,299 - 90,436,416)
sequence
gaattctcagaattgtgttgactcgcctctctagggagtatgaacagggt
taagaagaaaacagcacggagccacttcatcctctacggaaccttctgcc
tctttccttacctgccaatgtggatggtggttgtgtctgactggttactg
tttgtctctctccctctctcatgccgtggccccctcctctttcccacctt
ccctccctcccttcctccaacacttactatttttctcatctttgctagaa
atttaagaaaaaaaaagttctgtgaagtaatccgataacgtcatgtattt
tggagctggctttaacaggtcttgctgttgggttgctttgaaagaagtcc
ccaatggatcttctgtctttcaaagacctgagcaactggatgggtgatag
cagactgtgcttttgggtgggagggaaatcaagagttctgggttaagctt
ttaagttggagaaacttagaatcgatgtgaaaaatgtcaagcaggtggtt
ggatctaccagtcatgaaactcaggaatgctagatacacatttagtctat
aaccctgtacccagggacgtgtatgacaaacctacattattcagaaacac
ctgtttttatggactatttagccctatgagtaaacttatttataatctaa
caagtgtctgacatcttttaatataaatgaatcaggttaatggttggtat
gaattagcaaaatttccttctcactttaaagttcaagataatttctctta
aattgtacatattcaccaagaagtccaaaacggtcttaattgtggtactt
agaaaagcaaatggaaatagagcctctctggttgtggaagggtaaagaac
gcattgcatgatagggcatgggatgtaaacagtagagatgctggaccact
gtgactgggggggggggg
gaattcccagcaagaagagagacttgagatgaagccaggaaagttaaatc
cctgtggatacaggaaaacacctctgtatgctggatggtggctaggcaac
agatctaacccctgtatacaggttcttctttgcttggggatttctgtgga
aaaccgagctctgctcctagggccaacctcagtaaatatttgtgaggcca
aatgggcttgtgggggccagtatgatgggtcggctggctgcagagacgct
gctggtctctattggctggtcattgcttctattaagacaatgcttataac
caccatactgcttttcagaggaaaggtaactcattgaatggccagtagac
aaagagagcttaaagctgtaatgtcagtaaagaggctttattctatacag
atttctgaacgtggacattacattctagctcactggaaactagactactc
ccccaaatcttcaattcattttagaaataggagcaacatttacttggagt
ccaagtacaaatgtttactgattttggaggaggtggccacacgcccttta
agcttagacgcctgttccatctcatccaaacattagataggctggcgaca
ttcccaagcagttcaatgtgagagaaaccacttccatgacttattaacaa
gccgagcagaatttttataggatccatccatccagatttattacagaaca
ccatttaataagaaaaaaaattaaacggatcgattgaattgaagtccttc
tgtaaagggagccatttaagtttgcctttgattaatgttagcattaaagg
gcttgtcactctcaactgctgggtactgcatttgtcaaatatcaggcttt
tcctttaaacaagtcagctataaatcccatctcccatgcctgagtggctt
ttctgcttctggcgtgtccctttcgtctctgccttgctctggccatgggc
tgatcctgtgcccgaccttcgatttgggtgagatggagagtgaggattag
agttaccctgcttttctctcgaatgaccacattggctgtggaccctacat
ccgggaggggcctaactctggctatatggctgggttttgtttcttactgg
ctcttcaatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_90301429_90302346
seq2: B6Ng01-041P03.b_46_963

seq1  GAATTCTCAGAATTGTGTTGACTCGCCTCTCTAGGGAGTATGAACAGGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGAATTGTGTTGACTCGCCTCTCTAGGGAGTATGAACAGGGT  50

seq1  TAAGAAGAAAACAGCACGGAGCCACTTCATCCTCTACGGAACCTTCTGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAGAAAACAGCACGGAGCCACTTCATCCTCTACGGAACCTTCTGCC  100

seq1  TCTTTCCTTACCTGCCAATGTGGATGGTGGTTGTGTCTGACTGGTTACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCTTACCTGCCAATGTGGATGGTGGTTGTGTCTGACTGGTTACTG  150

seq1  TTTGTCTCTCTCCCTCTCTCATGCCGTGGCCCCCTCCTCTTTCCCACCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTCTCTCCCTCTCTCATGCCGTGGCCCCCTCCTCTTTCCCACCTT  200

seq1  CCCTCCCTCCCTTCCTCCAACACTTACTATTTTTCTCATCTTTGCTAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCCTCCCTTCCTCCAACACTTACTATTTTTCTCATCTTTGCTAGAA  250

seq1  ATTTAAGAAAAAAAAAGTTCTGTGAAGTAATCCGATAACGTCATGTATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAGAAAAAAAAAGTTCTGTGAAGTAATCCGATAACGTCATGTATTT  300

seq1  TGGAGCTGGCTTTAACAGGTCTTGCTGTTGGGTTGCTTTGAAAGAAGTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCTGGCTTTAACAGGTCTTGCTGTTGGGTTGCTTTGAAAGAAGTCC  350

seq1  CCAATGGATCTTCTGTCTTTCAAAGACCTGAGCAACTGGATGGGTGATAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGGATCTTCTGTCTTTCAAAGACCTGAGCAACTGGATGGGTGATAG  400

seq1  CAGACTGTGCTTTTGGGTGGGAGGGAAATCAAGAGTTCTGGGTTAAGCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTGTGCTTTTGGGTGGGAGGGAAATCAAGAGTTCTGGGTTAAGCTT  450

seq1  TTAAGTTGGAGAAACTTAGAATCGATGTGAAAAATGTCAAGCAGGTGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTTGGAGAAACTTAGAATCGATGTGAAAAATGTCAAGCAGGTGGTT  500

seq1  GGATCTACCAGTCATGAAACTCAGGAATGCTAGATACACATTTAGTCTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTACCAGTCATGAAACTCAGGAATGCTAGATACACATTTAGTCTAT  550

seq1  AACCCTGTACCCAGGGACGTGTATGACAAACCTACATTATTCAGAAACAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTGTACCCAGGGACGTGTATGACAAACCTACATTATTCAGAAACAC  600

seq1  CTGTTTTTATGGACTATTTAGCCCTATGAGTAAACTTATTTATAATCTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTTATGGACTATTTAGCCCTATGAGTAAACTTATTTATAATCTAA  650

seq1  CAAGTGTCTGACATCTTTTAATATAAATGAATCAGGTTAATGGTTGGTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGTCTGACATCTTTTAATATAAATGAATCAGGTTAATGGTTGGTAT  700

seq1  GAATTAGCAAAATTTCCTTCTCACTTTAAAGTTCAAGATAATTTCTCTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTAGCAAAATTTCCTTCTCACTTTAAAGTTCAAGATAATTTCTCTTA  750

seq1  AATTGTACATATTCACCAAGAAGTCCAAAACGGTCTTAATTGTGGTACTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTACATATTCACCAAGAAGTCCAAAACGGTCTTAATTGTGGTACTT  800

seq1  AGAAAAGCAAATGGAAATAGAGCCTCTCTGGTTGTGGAAGGGTAAAGAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGCAAATGGAAATAGAGCCTCTCTGGTTGTGGAAGGGTAAAGAAC  850

seq1  GCATTGCATGATAGGGCATGGGATGTAAACAGTAGAGATGCTGGACCACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGCATGATAGGGCATGGGATGTAAACAGTAGAGATGCTGGACCACT  900

seq1  GTGACTGGGGGGGGGGGG  918
      ||||||||||||||||||
seq2  GTGACTGGGGGGGGGGGG  918

seq1: chr10_90435299_90436416
seq2: B6Ng01-041P03.g_67_1176 (reverse)

seq1  GGTTGAAGAAGCAGTAAGAA--CAAAGCCAGCCATGT-GGCAGAGTTAGG  47
      | |||||||  |||||||||   ||| |||||||| | | ||||||||||
seq2  GATTGAAGAGCCAGTAAGAAACAAAACCCAGCCATATAGCCAGAGTTAGG  50

seq1  CCCCTCCAGATGGTAGGGTACAACAGACAATTGTGGTTCATCTCAGAGAG  97
      ||||||| |   ||||||| | |||| ||| ||||| |||| || |||||
seq2  CCCCTCCCGGATGTAGGGT-CCACAGCCAA-TGTGG-TCAT-TC-GAGAG  95

seq1  AAAGGCAGGGGTAACTCTAAT-CTCACTCTCCATTCTTCACCCAAATCGA  146
      ||| ||| ||||||||||||| ||||||||||||   |||||||||||||
seq2  AAAAGCA-GGGTAACTCTAATCCTCACTCTCCAT--CTCACCCAAATCGA  142

seq1  AGGTCGGGGCACAGGATCAGCCCATGGCCAGAGCAAGGCAGAGAACGAAA  196
      ||||| ||||||||||||||||||||||||||||||||||||| ||||||
seq2  AGGTC-GGGCACAGGATCAGCCCATGGCCAGAGCAAGGCAGAG-ACGAAA  190

seq1  GGGACACGCCAGAAGCAGAAAAGCCAACTCAGGCATGGGAGATGGGATTT  246
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GGGACACGCCAGAAGCAGAAAAGCC-ACTCAGGCATGGGAGATGGGATTT  239

seq1  ATAGCTGACTTTGTTTAAAGGAAAAGCCTGATATTTGACAAATGCAGTAA  296
      ||||||||| ||||||||||||||||||||||||||||||||||||||| 
seq2  ATAGCTGAC-TTGTTTAAAGGAAAAGCCTGATATTTGACAAATGCAGTAC  288

seq1  CCAGCAGTTGAGAGTGACAAGCCCTTAAATGCTAACATTAATCAAAGGCA  346
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CCAGCAGTTGAGAGTGACAAGCCCTTTAATGCTAACATTAATCAAAGGCA  338

seq1  AACTTAAATGGCTCCCTTTACAGAAGGACTTCAATTCAATCGATCCGTTT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTAAATGGCTCCCTTTACAGAAGGACTTCAATTCAATCGATCCGTTT  388

seq1  AATTTTTTTTCTTATTAAATGGTGTTCTGTAATAAATCTGGATGGATGGA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTTTTCTTATTAAATGGTGTTCTGTAATAAATCTGGATGGATGGA  438

seq1  TCCTATAAAAATTCTGCTCGGCTTGTTAATAAGTCATGGAAGTGGTTTCT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATAAAAATTCTGCTCGGCTTGTTAATAAGTCATGGAAGTGGTTTCT  488

seq1  CTCACATTGAACTGCTTGGGAATGTCGCCAGCCTATCTAATGTTTGGATG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACATTGAACTGCTTGGGAATGTCGCCAGCCTATCTAATGTTTGGATG  538

seq1  AGATGGAACAGGCGTCTAAGCTTAAAGGGCGTGTGGCCACCTCCTCCAAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGAACAGGCGTCTAAGCTTAAAGGGCGTGTGGCCACCTCCTCCAAA  588

seq1  ATCAGTAAACATTTGTACTTGGACTCCAAGTAAATGTTGCTCCTATTTCT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTAAACATTTGTACTTGGACTCCAAGTAAATGTTGCTCCTATTTCT  638

seq1  AAAATGAATTGAAGATTTGGGGGAGTAGTCTAGTTTCCAGTGAGCTAGAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGAATTGAAGATTTGGGGGAGTAGTCTAGTTTCCAGTGAGCTAGAA  688

seq1  TGTAATGTCCACGTTCAGAAATCTGTATAGAATAAAGCCTCTTTACTGAC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATGTCCACGTTCAGAAATCTGTATAGAATAAAGCCTCTTTACTGAC  738

seq1  ATTACAGCTTTAAGCTCTCTTTGTCTACTGGCCATTCAATGAGTTACCTT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAGCTTTAAGCTCTCTTTGTCTACTGGCCATTCAATGAGTTACCTT  788

seq1  TCCTCTGAAAAGCAGTATGGTGGTTATAAGCATTGTCTTAATAGAAGCAA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTGAAAAGCAGTATGGTGGTTATAAGCATTGTCTTAATAGAAGCAA  838

seq1  TGACCAGCCAATAGAGACCAGCAGCGTCTCTGCAGCCAGCCGACCCATCA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCAGCCAATAGAGACCAGCAGCGTCTCTGCAGCCAGCCGACCCATCA  888

seq1  TACTGGCCCCCACAAGCCCATTTGGCCTCACAAATATTTACTGAGGTTGG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGCCCCCACAAGCCCATTTGGCCTCACAAATATTTACTGAGGTTGG  938

seq1  CCCTAGGAGCAGAGCTCGGTTTTCCACAGAAATCCCCAAGCAAAGAAGAA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAGGAGCAGAGCTCGGTTTTCCACAGAAATCCCCAAGCAAAGAAGAA  988

seq1  CCTGTATACAGGGGTTAGATCTGTTGCCTAGCCACCATCCAGCATACAGA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTATACAGGGGTTAGATCTGTTGCCTAGCCACCATCCAGCATACAGA  1038

seq1  GGTGTTTTCCTGTATCCACAGGGATTTAACTTTCCTGGCTTCATCTCAAG  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTTTCCTGTATCCACAGGGATTTAACTTTCCTGGCTTCATCTCAAG  1088

seq1  TCTCTCTTCTTGCTGGGAATTC  1118
      ||||||||||||||||||||||
seq2  TCTCTCTTCTTGCTGGGAATTC  1110