BAC Information

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BAC

Clone NameB6Ng01-043A18
Chromosome10 (Build37)
Map Location 104,053,471 - 104,054,180
singlet/doubletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-043A18.bB6Ng01-043A18.g
ACCDH869230DH869231
length1,0321,202
definitionDH869230|Mus musculus domesticus DNA, BAC clone: B6Ng01-043A18, 5' end.DH869231|Mus musculus domesticus DNA, BAC clone: B6Ng01-043A18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcctccattgttcgtggggttgcaagcttgtactctggaaatca
gtcttgtggttcttcagaaaattggatatagtagtactggaggatcctgc
aatacctctccttggcataaatccagaagctgttccaaccggtaagaagg
acacatgctccactatgttcatagcagccttatttgtaatagccagaagc
tggaaagaatccagatgttcctcaacagaagagtagctacagaaaatgtg
gtacatttgcacaatggagtactactcagctattaaaaagaatgaattta
tgaaattcctaggcaaatggatggacctggagggtatcatcctgagtgag
gtaacccaatcacaaaagaactctcacaatatgtactcactgataagtgg
ttattagcccagatacttagaatacccaagatataagtcacaatttgtga
aactcatcaaactcaagaagaacgaagaccaaagtgtggacagtttgccc
cttcctagagttaggaacaaaccacccatggaaggagttacagagacaaa
gtttatagctgagaggaaaggacggaccatctagagactgccacacctgg
ggaatccatcccataatcaacctccaaaagctgacaccattgcatacact
agcaagattttgctgagaggaccctgatatagctctctctcgtgagacta
tccagtggcctagcaaacacagaagtggatactcacattagctcttggat
ggatcacggggcccccaatggaggagctagggaaagtacccaggagctaa
agggatctgcaactgtatatgtggaacaacaatatgaactaaccagtaac
cacagagctcatgtctctagctgcatatgtatcagaagatggcctaatca
tccatcagtggaaagagaggtccattggtcatgcaaactttatatgcctc
attataggggaacgccagggccaagaagtaggagtggggtgggaaaaaaa
agatctgctggtctactagctgaagcgttgtt

gaattctttgtttagctctgtaccccatttttaatagggttattaaagat
tttctggagtccaacttcttgacttctttatatatattggatattagtcc
cctatcagatttaggattggtgaagatcttttccaaatctgttggttgcc
ttttggtcttattgacagtgtcctttgcattacaaaagctttgcaatttt
atgaggtcccatttgtcgattcttgatcttacagcacaaaccattggtgt
tctgctcaggaatctttcccttgtgcccatatcttggaggttcttccaca
ctttctcctctataagtttcagtgtatctggttttatgtggcgttttttg
atccacctagacttgagcgttgtacaaggagataagaatggatcaattaa
cattcttctacatgataactgccagttgtgtcagcaccatttgttgaaga
tgctgtcttttgtccactagatggttttagctcccttgtcaaaggtcaag
tgaccataggtgtgtgggtttatttctggatcttcatttctgatcaattg
atctacctgtctatcattgtgccagtaccatgcagattttatcacaattg
ctctgtagtacagcttgaggacaggcatggtgattccaccagaggttctt
ttgttgttgagaatagtttttgctatcctaggtttttttcttattccaga
tgaatttgcaaattgccctttcaaacgctgtgaagaatttcgagtgaatt
ttgatggggattgtattgattcggtagattgcttttggcaagataaccat
ttttactgtattaatactaccaatccatgagcagggtagatccttccatc
ttctgagatcttcgatttcattcgtcaaagacttgaagtcttatcataga
tctttcacttccctagttagaatcacagcaaggtattttatatttttgtg
actatttgaggggtgtgtttccttaattttttctggctgatatcctttgt
gtagagaaatgtcactgatttgtttgagtatttatatccagctactcacc
aaagttgttaatcagctaagagtctctgtgaatttttttgtcactataac
tacatattattgccaataggattggacctctccctccattgatcctgatc
ggtccaatggtcgctactctagactcattatgtgaggtgaaatgagtatc
ct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053471_104054180
seq2: B6Ng01-043A18.b_51_543 (reverse)

seq1  GCAAAGTGTCCACACTTTGGTCTTCGTTC-TCTTGAGTTTAATGTGTTTA  49
      ||||| ||||||||||||||||||||||| |||||||||| ||| |||| 
seq2  GCAAACTGTCCACACTTTGGTCTTCGTTCTTCTTGAGTTTGATGAGTTTC  50

seq1  GCAAATTGTATCTTATATCTTGGGTATCCTAAGTTTCTGGGCTAATATCC  99
       ||||||||  |||||||||||||||| |||||| |||||||||||| ||
seq2  ACAAATTGTGACTTATATCTTGGGTATTCTAAGTATCTGGGCTAATAACC  100

seq1  ACTTATCAGTGAGTACATATTGCGCGAGTTCCTTTGTGATTGGGTTACCG  149
      |||||||||||||||||||||| | |||||| ||||||||||||||||| 
seq2  ACTTATCAGTGAGTACATATTGTGAGAGTTCTTTTGTGATTGGGTTACCT  150

seq1  CACTCAGGATGATACTCTCCAGGTCCATCCATTTGCCTAGGAATTTCATA  199
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CACTCAGGATGATACCCTCCAGGTCCATCCATTTGCCTAGGAATTTCATA  200

seq1  AATTCATTCTTTTTAATAGCTCCATTTACATTTAATTTAATTAATGTAAT  249
      ||||||||||||||||||||                              
seq2  AATTCATTCTTTTTAATAGC------------------------------  220

seq1  TACAATTAATTAATTTATTAATTAAATAATTTAATAATTTAATTGATAAA  299
                                                        
seq2  --------------------------------------------------  220

seq1  TTAATTTAATTAATTAATTTAATTAATTAAATTAAATAATAATTTAATAA  349
                                                        
seq2  --------------------------------------------------  220

seq1  TAAATTAAATATTTTAAAATTAATAATAATTTTATAAGTAAATAATTTAA  399
                                        | ||||          
seq2  ----------------------------------TGAGTA----------  226

seq1  TTAATGTAATTTAATTAATGTAATTACATTACATTTAATAGCTCCATTGT  449
                         |||                   |||||||||
seq2  -------------------GTA-------------------CTCCATTGT  238

seq1  GTAAATGTACCACATTTTCTGTATCTATTCCTCTGTTGAGGGGCATCTGG  499
      | ||||||||||||||||||||| ||| || ||||||||||  |||||||
seq2  GCAAATGTACCACATTTTCTGTAGCTACTCTTCTGTTGAGGAACATCTGG  288

seq1  GTTCTTTCCAGCTCCTGGCTATTATAAATAAGGCTGCTATGAATATAGTG  549
       |||||||||||| |||||||||| |||||||||||||||||| ||||||
seq2  ATTCTTTCCAGCTTCTGGCTATTACAAATAAGGCTGCTATGAACATAGTG  338

seq1  GAGCATGTGTCCTTCTTACCGGTTGGGGCATCTTCTGGATATATGCCCAG  599
      ||||||||||||||||||||||||||  || ||||||||| |||||| ||
seq2  GAGCATGTGTCCTTCTTACCGGTTGGAACAGCTTCTGGATTTATGCCAAG  388

seq1  AAGAGGTATTGCTGGATCCTCCGGTAGTACTATGTCCAATTTTCTGACGA  649
       ||||||||||| ||||||||| ||| |||||| ||||||||||||| ||
seq2  GAGAGGTATTGCAGGATCCTCCAGTACTACTATATCCAATTTTCTGAAGA  438

seq1  ACCGCCAGACGGATTTCCAGAGTGGTTGTACAAGCCTGCAATCCCACCAA  699
      ||| | |||| ||||||||||      |||||||| ||||| ||||| ||
seq2  ACCACAAGACTGATTTCCAGA------GTACAAGCTTGCAACCCCACGAA  482

seq1  CAATGGAGGAG  710
      |||||||||||
seq2  CAATGGAGGAG  493


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