BAC Information

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BAC

Clone NameB6Ng01-043H16
Chromosome10 (Build37)
Map Location 38,573,662 - 38,712,959
singlet/doubletdoublet
Overlap geneLOC100040915, Lama4
Upstream genenone
Downstream gene1700025K23Rik, Tube1, EG624165, LOC100040964, Fyn, LOC629337, Traf3ip2, LOC667964, EG667970, E130307A14Rik, Rev3l, EG666304, LOC213332, 4930547M16Rik, LOC667982, 2010001E11Rik, LOC667994, LOC100041085, BC021785
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-043H16.bB6Ng01-043H16.g
ACCDH869528DH869529
length518519
definitionDH869528|Mus musculus domesticus DNA, BAC clone: B6Ng01-043H16, 5' end.DH869529|Mus musculus domesticus DNA, BAC clone: B6Ng01-043H16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(38,573,662 - 38,574,178)(38,712,435 - 38,712,959)
sequence
ggaattcttccagtatgaagaccaattcaaccagagagtatttgacattg
ggttctctctgtctctgtctctctctgtctctctctgtgtctctgtctct
gtctctctctgtctctctctctgtctctgtctctgtctctctctctccct
ccctccctcccattcccccttccccttcctctccatctacatctcccttc
ccctctgtgagtgtgtgtgtgtgtgtgtgtgagagagagagagagagaga
gagagagagatggattgagatagaaatgcatatgtacatatacagggata
ggtggggtgtggctcaattgtaaagtgttggtttgaccctgggtttaatc
ccaagccccttaaaacataactgttagatgctcaagaaattttatttttg
tatactttggtatttggttcctaaaaacagaagcattcccttcatagatg
ttagcataaccaaaactgatacagcaaatgcatgtgccaatatgtactac
caatgaaaataagccagc
ctccttatgcaaatgaggcatccccaacatgccccgccctggccagtgag
gtatacacactctaatagccactactcaaccctcaaaggtttaaatagcc
tttgttcccttgttaaaataagctgtctccctgaaaccaatctcctgaga
gtctgttctagtgtgctcactcactgcctgagtgagcccccagctgtttc
ctgccttgcctccttactcaggatttatcaatccactggttgtgactggg
gaaggaaactcctccctcttcttccccatccctttttccttcccttctct
ccctcctacactatctctcttaatcagctttctattactctaacaaaaca
tctgagtaacttaaggtaacttaaggacgaaaggctcatggttttagagc
tttcagttcaaggttgcttggtctgcggtcagagtctgaggcagaaggag
gtctgtaactttatagcaaccagagaggcgaggagagggagaggagagga
gaggagaggagaggagagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_38573662_38574178
seq2: B6Ng01-043H16.b_47_563

seq1  GAATTCTTCCAGTATGAAGACCAATTCAACCAGAGAGTATTTGACATTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCAGTATGAAGACCAATTCAACCAGAGAGTATTTGACATTGG  50

seq1  GTTCTCTCTGTCTCTGTCTCTCTCTGTCTCTCTCTGTGTCTCTGTCTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCTCTGTCTCTGTCTCTCTCTGTCTCTCTCTGTGTCTCTGTCTCTG  100

seq1  TCTCTCTCTGTCTCTCTCTCTGTCTCTGTCTCTGTCTCTCTCTCTCCCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTGTCTCTCTCTCTGTCTCTGTCTCTGTCTCTCTCTCTCCCTC  150

seq1  CCTCCCTCCCATTCCCCCTTCCCCTTCCTCTCCATCTACATCTCCCTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCTCCCATTCCCCCTTCCCCTTCCTCTCCATCTACATCTCCCTTCC  200

seq1  CCTCTGTGAGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGTGAGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG  250

seq1  AGAGTCTACTGCATTCATATAGAAATGCATATGTACATATACAGGGATAG  300
      ||||     || ||| | ||||||||||||||||||||||||||||||||
seq2  AGAGAGAGATGGATTGAGATAGAAATGCATATGTACATATACAGGGATAG  300

seq1  GTGGGGTGTGGCTCAATTGTAAAGTGTTGGTTTGACCCTGGGTTTAATCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGTGTGGCTCAATTGTAAAGTGTTGGTTTGACCCTGGGTTTAATCC  350

seq1  CAAGCCCCTTAAAACATAACTGTTAGATGCTCAAGAAATTTTATTTTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCCCTTAAAACATAACTGTTAGATGCTCAAGAAATTTTATTTTTGT  400

seq1  ATACTTTGGTATATGGTTCCTAAAAACAGAAGCATTCCCTTCATAGATGT  450
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ATACTTTGGTATTTGGTTCCTAAAAACAGAAGCATTCCCTTCATAGATGT  450

seq1  TAGCATAACCAAAACTGAGACAGCAAATGCATGTGCCAATATGTACTACC  500
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TAGCATAACCAAAACTGATACAGCAAATGCATGTGCCAATATGTACTACC  500

seq1  AATGAAAATAAGCCAGC  517
      |||||||||||||||||
seq2  AATGAAAATAAGCCAGC  517

seq1: chr10_38712435_38712959
seq2: B6Ng01-043H16.g_68_592 (reverse)

seq1  CCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCCTCTCCTCGCCTCTCTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCCTCTCCTCGCCTCTCTGG  50

seq1  TTGCTATAAAGTTACAGACCTCCTTCTGCCTCAGACTCTGACCGCAGACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTATAAAGTTACAGACCTCCTTCTGCCTCAGACTCTGACCGCAGACC  100

seq1  AAGCAACCTTGAACTGAAAGCTCTAAAACCATGAGCCTTTCGTCCTTAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAACCTTGAACTGAAAGCTCTAAAACCATGAGCCTTTCGTCCTTAAG  150

seq1  TTACCTTAAGTTACTCAGATGTTTTGTTAGAGTAATAGAAAGCTGATTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTTAAGTTACTCAGATGTTTTGTTAGAGTAATAGAAAGCTGATTAA  200

seq1  GAGAGATAGTGTAGGAGGGAGAGAAGGGAAGGAAAAAGGGATGGGGAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGATAGTGTAGGAGGGAGAGAAGGGAAGGAAAAAGGGATGGGGAAGA  250

seq1  AGAGGGAGGAGTTTCCTTCCCCAGTCACAACCAGTGGATTGATAAATCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGAGGAGTTTCCTTCCCCAGTCACAACCAGTGGATTGATAAATCCT  300

seq1  GAGTAAGGAGGCAAGGCAGGAAACAGCTGGGGGCTCACTCAGGCAGTGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAAGGAGGCAAGGCAGGAAACAGCTGGGGGCTCACTCAGGCAGTGAG  350

seq1  TGAGCACACTAGAACAGACTCTCAGGAGATTGGTTTCAGGGAGACAGCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCACACTAGAACAGACTCTCAGGAGATTGGTTTCAGGGAGACAGCTT  400

seq1  ATTTTAACAAGGGAACAAAGGCTATTTAAACCTTTGAGGGTTGAGTAGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAACAAGGGAACAAAGGCTATTTAAACCTTTGAGGGTTGAGTAGTG  450

seq1  GCTATTAGAGTGTGTATACCTCACTGGCCAGGGCGGGGCATGTTGGGGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTAGAGTGTGTATACCTCACTGGCCAGGGCGGGGCATGTTGGGGAT  500

seq1  GCCTCATTTGCATAAGGAGGAATTC  525
      |||||||||||||||||||||||||
seq2  GCCTCATTTGCATAAGGAGGAATTC  525