BAC Information

Click to search

BAC

Clone NameB6Ng01-044B14
Chromosome10 (Build37)2 (Build37)
Map Location 104,053,419 - 104,054,36357,766,937 - 57,768,051
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-044B14.bB6Ng01-044B14.g
ACCDH869954DH869955
length1,0631,113
definitionDH869954|Mus musculus domesticus DNA, BAC clone: B6Ng01-044B14, 5' end.DH869955|Mus musculus domesticus DNA, BAC clone: B6Ng01-044B14, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,053,419 - 104,054,363)(57,766,937 - 57,768,051)
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagccaagccca
tatttttaacaatatcttttcatgactacataagtgtccacagtccacaa
gggtgataggacccttctctgcctcactttttttcctgatcctcacaaac
atccttagcattcacagcttatattgacatcttcaacacaagcaatccag
gtgtttctatcatgattgcccaaattccaccagactaggccttctattta
atagctacaggctttattacacaaaattcacttttttttgttatgtgaga
attgtttcagactgtggagttaggagcaatacatctttaaagggacatgt
catcagtttgccc
gaattcatttaccagaatgcatcctttaagaaaataaataatggttgctt
catttgttggtgatatctgtgacttaagttcctaacacagtatattggaa
gaagattttgctggttactgtgagtgaaggacgcttcttcaaggacatca
gcacagtgcccaaaacaatcaagttaaaaaaaggaaatacggtgtgtgtc
cacactcagcatcttgttgttctgtctctcaggaagaagaagcgtgttcc
aagtttccattggtggagtttcatttgaattgggaaagcaaatatgaaga
aaattgcatatttaaaagaataggttctagtgccctgggaggaggagggg
caaaaaacatctcacctctatgacattccccatcacagacgacccatgaa
acccagaagtcaggcagctttgcatcttgcctccatttcaggttgttgaa
accacatacacaactgttgatttttgttgaaatggtgatgacactacaag
tagcctttgaaattcttcttgtgctgtaatggaaggagctttagaaaagc
tgcatctgagtttcctctactatagagttaccgatagaaaatcatccatt
tcagaggcagctgcagtacttaggaatcagccacacctcaaaatcccttt
agagtcctcctcagctcagcagtgcccaatagaagacaccacatatgcaa
aggactgtggggttcgtggaggacaggctcagcatggaccccaggataca
tgacctcatttaggatatcctagtgaaggagaaaacaatgcctaataact
tacggaaatataaatatggctcaagctttagagtactgtggctgggggat
ttaagaggtccttagatcctctttgggttccagggaaaatgctaaactct
gccttgtggttgaatgttcatccattcattgctcctgcctctaccctcca
cactcagatgcctcctggggcagctgatgccaggtgatacagggcagagg
cctcagcttgtctgcatggtttcctcttctcctcagctgtcacttctcag
ttatccatcctccacccatgaagctagaaggtatcgttctgccataaata
cttctctgctacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053419_104054363
seq2: B6Ng01-044B14.b_45_777 (reverse)

seq1  TTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTTCCTATTCTAAGAAG  50
      ||||| ||||||||||||||||||||||||||||| ||  ||||||| ||
seq2  TTTGTTTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCACTTCTAAGGAG  50

seq1  GGGCAAAGTGTCCACACTTTGGTCTTC-GTTCTCTTGAGTTTAATGTGTT  99
      ||||| |||||||||||||  ||||||  || |||||||||| |||||||
seq2  GGGCATAGTGTCCACACTTCAGTCTTCATTTTTCTTGAGTTTCATGTGTT  100

seq1  TAGCAAATTGTATCTTATATCTTGGGTATCCTAAGTTTCTGGGCTAATAT  149
      ||| ||||||||||||||||| ||||||||||| |||| ||||||| |||
seq2  TAGGAAATTGTATCTTATATCGTGGGTATCCTAGGTTT-TGGGCTAGTAT  149

seq1  CCACTTATCAGTGAGTACATATTGCGCGAGTTCCTTTGTGATTGGGTTAC  199
      |||||||||||||||||||||||| | ||||||||||||||||| |||||
seq2  CCACTTATCAGTGAGTACATATTGTGTGAGTTCCTTTGTGATTGTGTTAC  199

seq1  CGCACTCAGGATGATACTCTCCAGGTCCATCCATTTGCCTAGGAATTTCA  249
      | ||||||||||||| ||||||||||||||||||||| ||||||||||||
seq2  CTCACTCAGGATGATGCTCTCCAGGTCCATCCATTTGGCTAGGAATTTCA  249

seq1  TAAATTCATTCTTTTTAATAGCTCCATTTACATTTAATTTAATTAATGTA  299
      ||||||||||||||||||||||                            
seq2  TAAATTCATTCTTTTTAATAGC----------------------------  271

seq1  ATTACAATTAATTAATTTATTAATTAAATAATTTAATAATTTAATTGATA  349
                                                        
seq2  --------------------------------------------------  271

seq1  AATTAATTTAATTAATTAATTTAATTAATTAAATTAAATAATAATTTAAT  399
                                                        
seq2  --------------------------------------------------  271

seq1  AATAAATTAAATATTTTAAAATTAATAATAATTTTATAAGTAAATAATTT  449
                                          | ||||        
seq2  ------------------------------------TGAGTA--------  277

seq1  AATTAATGTAATTTAATTAATGTAATTACATTACATTTAATAGCTCCATT  499
                           |||                   |||||||
seq2  ---------------------GTA-------------------CTCCATT  287

seq1  GTGTAAATGTACCACATTTTCTGTATCTATTCCTCTGTTGAGGGGCATCT  549
      ||||| ||||||||||||||||||||| ||||||||||||||||||||||
seq2  GTGTAGATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGGCATCT  337

seq1  GGGTTCTTTCCAGCTCCTGGCTATTATAAATAAGGCTGCTATGAATATAG  599
      ||||||||||||| | ||||||||||||||||||||||||||||| ||||
seq2  GGGTTCTTTCCAGTTTCTGGCTATTATAAATAAGGCTGCTATGAACATAG  387

seq1  TGGAGCATGTGTCCTTCTTACCGGTTGGGGCATCTTCTGGATATATGCCC  649
      |||||||||||||||||||||| |||||||| ||||||||||||||||||
seq2  TGGAGCATGTGTCCTTCTTACCAGTTGGGGCTTCTTCTGGATATATGCCC  437

seq1  AGAAGAGGTATTGCTGGATCCTCCGGTAGTACTATGTCCAATTTTCTGAC  699
      || |||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AGGAGAGGTATTGCTGGATCCTCCGGTAGTACTATGTCCAATTTTCTGAG  487

seq1  GAACCGCCAGACGGATTTCCAGAGTGGTTGTACAAGCCTGCAATCCCACC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCGCCAGACGGATTTCCAGAGTGGTTGTACAAGCCTGCAATCCCACC  537

seq1  AACAATGGAGGAGTGTTCCTCTTTCTCCACATCCTCGCCAGCATCTGCTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATGGAGGAGTGTTCCTCTTTCTCCACATCCTCGCCAGCATCTGCTG  587

seq1  TCACCTGAATTTTTGATCTTAGCCATTCTGACTGGTGTGAGGTGGAATCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTGAATTTTTGATCTTAGCCATTCTGACTGGTGTGAGGTGGAATCT  637

seq1  CAGGGTTGTTTTGATTTGCATTTCCCTGATGATTAAGGATGTTGAACATT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTTGTTTTGATTTGCATTTCCCTGATGATTAAGGATGTTGAACATT  687

seq1  TTTTCAGGTGCTTCTCTGCCATTCGGTATTCCTCAGGTGAGAATTC  945
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAGGTGCTTCTCTGCCATTCGGTATTCCTCAGGTGAGAATTC  733

seq1: chr2_57766937_57768051
seq2: B6Ng01-044B14.g_69_1181

seq1  GAATTCATTTACCAGAATGCATCCTTTAAGAAAATAAATAATGGTTGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTACCAGAATGCATCCTTTAAGAAAATAAATAATGGTTGCTT  50

seq1  CATTTGTTGGTGATATCTGTGACTTAAGTTCCTAACACAGTATATTGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTTGGTGATATCTGTGACTTAAGTTCCTAACACAGTATATTGGAA  100

seq1  GAAGATTTTGCTGGTTACTGTGAGTGAAGGACGCTTCTTCAAGGACATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATTTTGCTGGTTACTGTGAGTGAAGGACGCTTCTTCAAGGACATCA  150

seq1  GCACAGTGCCCAAAACAATCAAGTTAAAAAAAGGAAATACGGTGTGTGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGTGCCCAAAACAATCAAGTTAAAAAAAGGAAATACGGTGTGTGTC  200

seq1  CACACTCAGCATCTTGTTGTTCTGTCTCTCAGGAAGAAGAAGCGTGTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTCAGCATCTTGTTGTTCTGTCTCTCAGGAAGAAGAAGCGTGTTCC  250

seq1  AAGTTTCCATTGGTGGAGTTTCATTTGAATTGGGAAAGCAAATATGAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTCCATTGGTGGAGTTTCATTTGAATTGGGAAAGCAAATATGAAGA  300

seq1  AAATTGCATATTTAAAAGAATAGGTTCTAGTGCCCTGGGAGGAGGAGGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGCATATTTAAAAGAATAGGTTCTAGTGCCCTGGGAGGAGGAGGGG  350

seq1  CAAAAAACATCTCACCTCTATGACATTCCCCATCACAGACGACCCATGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAACATCTCACCTCTATGACATTCCCCATCACAGACGACCCATGAA  400

seq1  ACCCAGAAGTCAGGCAGCTTTGCATCTTGCCTCCATTTCAGGTTGTTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGAAGTCAGGCAGCTTTGCATCTTGCCTCCATTTCAGGTTGTTGAA  450

seq1  ACCACATACACAACTGTTGATTTTTGTTGAAATGGTGATGACACTACAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACATACACAACTGTTGATTTTTGTTGAAATGGTGATGACACTACAAG  500

seq1  TAGCCTTTGAAATTCTTCTTGTGCTGTAATGGAAGGAGCTTTAGAAAAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTTTGAAATTCTTCTTGTGCTGTAATGGAAGGAGCTTTAGAAAAGC  550

seq1  TGCATCTGAGTTTCCTCTACTATAGAGTTACCGATAGAAAATCATCCATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCTGAGTTTCCTCTACTATAGAGTTACCGATAGAAAATCATCCATT  600

seq1  TCAGAGGCAGCTGCAGTACTTAGGAATCAGCCACACCTCAAAATCCCTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGGCAGCTGCAGTACTTAGGAATCAGCCACACCTCAAAATCCCTTT  650

seq1  AGAGTCCTCCTCAGCTCAGCAGTGCCCAATAGAAGACACCACATATGCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCCTCCTCAGCTCAGCAGTGCCCAATAGAAGACACCACATATGCAA  700

seq1  AGGACTGTGGGGTTCGTGGAGGACAGGCTCAGCATGGACCCCAGGATACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTGTGGGGTTCGTGGAGGACAGGCTCAGCATGGACCCCAGGATACA  750

seq1  TGACCTCATTTAGGATATCCTAGTGAAGGAGAAAACAATGCCTAATAACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTCATTTAGGATATCCTAGTGAAGGAGAAAACAATGCCTAATAACT  800

seq1  TACGGAAATATAAATATGGCTCAAGCTTTAGAGTACTGTGGCTGGGGGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGGAAATATAAATATGGCTCAAGCTTTAGAGTACTGTGGCTGGGGGAT  850

seq1  TTAAGAGGTCCTTAGATCCTCTTTGGGTTCCAGGGAAAATGCTAAACTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAGGTCCTTAGATCCTCTTTGGGTTCCAGGGAAAATGCTAAACTCT  900

seq1  GCCTTGTGGTTGAATGTTCATCCATTCATTGCTCCTGCCTCTACCCTCCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGTGGTTGAATGTTCATCCATTCATTGCTCCTGCCTCTACCCTCCA  950

seq1  CACTCAGATGCCTCCTGGGGCAGCTGATGCCAGGTGATACAGGGGCAGAG  1000
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CACTCAGATGCCTCCTGGGGCAGCTGATGCCAGGTGATACA-GGGCAGAG  999

seq1  GCCTTCAGCTTGTCTGCATGGTTTTCCTC-TCTCCTCAGCTGTCACTTCT  1049
      ||| ||||||||||||||||| ||||||| ||||||||||||||||||||
seq2  GCC-TCAGCTTGTCTGCATGG-TTTCCTCTTCTCCTCAGCTGTCACTTCT  1047

seq1  CAGTTTATCATCCT-CACCCATGAAGCCTAG-AGGTATCGTGTCTGCCAT  1097
      |||||   |||||| ||||||||||| |||| ||||||||| ||||||||
seq2  CAGTTATCCATCCTCCACCCATGAAG-CTAGAAGGTATCGT-TCTGCCAT  1095

seq1  AAATACTTCTCTGCTACG  1115
      ||||||||||||||||||
seq2  AAATACTTCTCTGCTACG  1113