BAC Information

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BAC

Clone NameB6Ng01-044B15
Chromosome10 (Build37)
Map Location 90,667,427 - 90,803,416
singlet/doubletdoublet
Overlap geneLOC100041769
Upstream geneAnks1b, Apaf1, 1200009F10Rik, Slc25a3, Tmpo
Downstream geneLOC100041799, LOC667203
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-044B15.bB6Ng01-044B15.g
ACCDH869956DH869957
length1,1781,103
definitionDH869956|Mus musculus domesticus DNA, BAC clone: B6Ng01-044B15, 5' end.DH869957|Mus musculus domesticus DNA, BAC clone: B6Ng01-044B15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(90,802,230 - 90,803,416)(90,667,427 - 90,668,533)
sequence
gaattcttacttttcaacaacagcaacagggccacccgtttggtgttctc
caagttaaaataattcgggccccatctcctaccagatgattctagacttt
caaaataatatagtcagaagcacatagagtactctatgaaaattgatacg
ctaattctaaacttcatacagaggagagaacaaataaaagttggcaaaga
cttcctgggaagaaactcacaaagaaacgttcttgccactctctaatctg
cattttttttttcactttgagtttcctcaatcggagaggaaggatgaacg
tgaagcattagagaaggcaaagatggctgtcatgctttggtcactggata
tacagcaagtcctgctagtctcgccaaatggtgagctccaggctcagtga
tcaaccctgcctcaaagcatacagtggagagcaattgtagaagacacatg
accagcggtctccccgcatacactccatgcttctgtgcaaagacaaaaac
attctatctcttactagacaataacaagaagttgtaaagtcctggtagcc
ggcttgggatccaagctgaagttttaccaacaatgatgggaaacagagca
aacacttggagagaaaataacaatcctgattccttgtggataccattgat
acaattgttcaatttcaccctaaaccagttcttcagatgtatggaatatt
atgagctaatcaactctttccattatccaggccagtttggagtaggttct
ctgttaactgagctcgaaagattcttagctggtgccttgtttctctggaa
ctttccagcacaaagcttagatcacagtttctcaataccagcagagctaa
cagttaactttcatggcacatgctatacgctaggcacttacgcggcacat
aatatatgctagcactgctgtaggcatttcattcatttggggttcgatta
aatatcactacagtcctgtgagctactttgtgagagagagttatgagccc
atttgtgaaatgagagaagtaaagtactttggttagtatgtttgtcaagc
taacagatggcacagccttgactcaaatcattggaccctcttccctccga
acctttgcgctaatgcggttggctagcaatcttgcattgctgtactggtt
cctcattaggaaatcccgcaccaagttg
gaattctcctgtggggtagggatcatagttgaagaagctggagactagaa
caatcagactcaagggtcaggtggcatgtggtagtatactcctgcgattc
tagccctaagaaagtggaggcaggccgggcatggtggcacacgcctttaa
tcccagcactcgggaggcagaggcagacggatttctgagttcgaggtcag
cctggtctacaaagtgagctccaggacagccagggctatacagagaaacc
ctgtctcgaaaaaccaaaaaaaaaaaaaaaaaaaaagaaaaaaaaaaaag
aaagtggaggcaggaagattgtgagtttcaggttagcctgggttgaataa
ggagaccctgtctcaaaaacaaaaagcaggactggagagatggctccaaa
gttaagaacaccaactgctcttccagagaggtcctgagttcaagtctcag
caaccacatggtggctcacagctatctgaaatgggatttgatgccctctt
ctggtgtgtgttcgaagacagctacagtgtagattaaataaataaataag
taaataaataaataaatagacaaaatatacaaactaaataaataactctt
aaaaaaccaaaatacataaaacaaaccaaagcacaaaaggacaggagtgt
cagagcctctaagaaatatggtgtcgttaggcaacagccagactgcgctg
tacagggaaactaactggttttcatgactttagttcagcatagaaaccag
gctgatagacctgaggaccccgtctacaacagagtgaaggggaaagtatc
atagactatctgagcctcatgcgtgagcagacacacacacgggaagcaca
cactggtgaaagacacacagtccccatcactgacagagcatggagaccca
aggccagcacagaaaagagtgtaagaaagagcaaacaaaatcaacagttc
ccttggtgaaacagcatctcccatctgggatgtcaagctttgtcatccat
catatttaatgagtcttattggggaccatggtagcctggaagataagtgc
tgaacagttgtctgactaacgcagaacaagcatgtcgatgtgtgcatgtg
ttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_90802230_90803416
seq2: B6Ng01-044B15.b_41_1218 (reverse)

seq1  CAACTTGGTGCTGGATTTCCTTAATGAGGGGACCCAGGACAGCAATGACA  50
      ||||||||||| |||||||| ||||||  ||| |||| |||||||||  |
seq2  CAACTTGGTGCGGGATTTCC-TAATGA--GGAACCAGTACAGCAATGCAA  47

seq1  GACTGCTAGCCAACCGCATAAGCGCCAAGAGTCTGGAGTG-AGAGGGTCC  99
      || |||||||||||||||| ||||| ||| ||  |||| | |||||||||
seq2  GATTGCTAGCCAACCGCATTAGCGCAAAG-GTTCGGAGGGAAGAGGGTCC  96

seq1  AATTGGATTTGAGTCAAGGCTGTGCCATCTGTTAGCTTGACAAACATACT  149
      |||  |||||||||||||||||||||||||||||||||||||||||||| 
seq2  AAT--GATTTGAGTCAAGGCTGTGCCATCTGTTAGCTTGACAAACATAC-  143

seq1  TAACCAAAGTACTTTACTTCTCTCATTTCACAAATGGGCTCATAACTCTC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCAAAGTACTTTACTTCTCTCATTTCACAAATGGGCTCATAACTCTC  193

seq1  CTCCTCACAAAGTAGCTCACAGGACTGTAGTGATATTTAATCGAACCCCA  249
         |||||||||||||||||||||||||||||||||||||||||||||||
seq2  --TCTCACAAAGTAGCTCACAGGACTGTAGTGATATTTAATCGAACCCCA  241

seq1  AATGAATGAAATGCCTACAGCAGTGCCTAGCATATATTATGTGCCGCGTA  299
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AATGAATGAAATGCCTACAGCAGTG-CTAGCATATATTATGTGCCGCGTA  290

seq1  AGTGCCTAGCGTATAGCATGTGCCATGAAAGTTAACTGTTAGCTCTGCTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCTAGCGTATAGCATGTGCCATGAAAGTTAACTGTTAGCTCTGCTG  340

seq1  GTATTGAGAAACTGTGATCTAAGCTTTGTGCTGGAAAGTTCCAGAGAAAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGAGAAACTGTGATCTAAGCTTTGTGCTGGAAAGTTCCAGAGAAAC  390

seq1  AAGGCACCAGCTAAGAATCTTTCGAGCTCAGTTAACAGAGAACCTACTCC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCACCAGCTAAGAATCTTTCGAGCTCAGTTAACAGAGAACCTACTCC  440

seq1  AAACTGGCCTGGATAATGGAAAGAGTTGATTAGCTCATAATATTCCATAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGGCCTGGATAATGGAAAGAGTTGATTAGCTCATAATATTCCATAC  490

seq1  ATCTGAAGAACTGGTTTAGGGTGAAATTGAACAATTGTATCAATGGTATC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAAGAACTGGTTTAGGGTGAAATTGAACAATTGTATCAATGGTATC  540

seq1  CACAAGGAATCAGGATTGTTATTTTCTCTCCAAGTGTTTGCTCTGTTTCC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGGAATCAGGATTGTTATTTTCTCTCCAAGTGTTTGCTCTGTTTCC  590

seq1  CATCATTGTTGGTAAAACTTCAGCTTGGATCCCAAGCCGGCTACCAGGAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATTGTTGGTAAAACTTCAGCTTGGATCCCAAGCCGGCTACCAGGAC  640

seq1  TTTACAACTTCTTGTTATTGTCTAGTAAGAGATAGAATGTTTTTGTCTTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAACTTCTTGTTATTGTCTAGTAAGAGATAGAATGTTTTTGTCTTT  690

seq1  GCACAGAAGCATGGAGTGTATGCGGGGAGACCGCTGGTCATGTGTCTTCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGAAGCATGGAGTGTATGCGGGGAGACCGCTGGTCATGTGTCTTCT  740

seq1  ACAATTGCTCTCCACTGTATGCTTTGAGGCAGGGTTGATCACTGAGCCTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTGCTCTCCACTGTATGCTTTGAGGCAGGGTTGATCACTGAGCCTG  790

seq1  GAGCTCACCATTTGGCGAGACTAGCAGGACTTGCTGTATATCCAGTGACC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCACCATTTGGCGAGACTAGCAGGACTTGCTGTATATCCAGTGACC  840

seq1  AAAGCATGACAGCCATCTTTGCCTTCTCTAATGCTTCACGTTCATCCTTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCATGACAGCCATCTTTGCCTTCTCTAATGCTTCACGTTCATCCTTC  890

seq1  CTCTCCGATTGAGGAAACTCAAAGTGAAAAAAAAAATGCAGATTAGAGAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCGATTGAGGAAACTCAAAGTGAAAAAAAAAATGCAGATTAGAGAG  940

seq1  TGGCAAGAACGTTTCTTTGTGAGTTTCTTCCCAGGAAGTCTTTGCCAACT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAAGAACGTTTCTTTGTGAGTTTCTTCCCAGGAAGTCTTTGCCAACT  990

seq1  TTTATTTGTTCTCTCCTCTGTATGAAGTTTAGAATTAGCGTATCAATTTT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTGTTCTCTCCTCTGTATGAAGTTTAGAATTAGCGTATCAATTTT  1040

seq1  CATAGAGTACTCTATGTGCTTCTGACTATATTATTTTGAAAGTCTAGAAT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGAGTACTCTATGTGCTTCTGACTATATTATTTTGAAAGTCTAGAAT  1090

seq1  CATCTGGTAGGAGATGGGGCCCGAATTATTTTAACTTGGAGAACACCAAA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGGTAGGAGATGGGGCCCGAATTATTTTAACTTGGAGAACACCAAA  1140

seq1  CGGGTGGCCCTGTTGCTGTTGTTGAAAAGTAAGAATTC  1187
      ||||||||||||||||||||||||||||||||||||||
seq2  CGGGTGGCCCTGTTGCTGTTGTTGAAAAGTAAGAATTC  1178

seq1: chr10_90667427_90668533
seq2: B6Ng01-044B15.g_67_1169

seq1  GAATTCTCCTGTGGGGTAGGGATCATAGTTGAAGAAGCTGGAGACTAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTGTGGGGTAGGGATCATAGTTGAAGAAGCTGGAGACTAGAA  50

seq1  CAATCAGACTCAAGGGTCAGGTGGCATGTGGTAGTATACTCCTGCGATTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCAGACTCAAGGGTCAGGTGGCATGTGGTAGTATACTCCTGCGATTC  100

seq1  TAGCCCTAAGAAAGTGGAGGCAGGCCGGGCATGGTGGCACACGCCTTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCCTAAGAAAGTGGAGGCAGGCCGGGCATGGTGGCACACGCCTTTAA  150

seq1  TCCCAGCACTCGGGAGGCAGAGGCAGACGGATTTCTGAGTTCGAGGTCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGCACTCGGGAGGCAGAGGCAGACGGATTTCTGAGTTCGAGGTCAG  200

seq1  CCTGGTCTACAAAGTGAGCTCCAGGACAGCCAGGGCTATACAGAGAAACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTCTACAAAGTGAGCTCCAGGACAGCCAGGGCTATACAGAGAAACC  250

seq1  CTGTCTCGAAAAACCAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCGAAAAACCAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAG  300

seq1  AAAGTGGAGGCAGGAAGATTGTGAGTTTCAGGTTAGCCTGGGTTGAATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGGAGGCAGGAAGATTGTGAGTTTCAGGTTAGCCTGGGTTGAATAA  350

seq1  GGAGACCCTGTCTCAAAAACAAAAAGCAGGACTGGAGAGATGGCTCCAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACCCTGTCTCAAAAACAAAAAGCAGGACTGGAGAGATGGCTCCAAA  400

seq1  GTTAAGAACACCAACTGCTCTTCCAGAGAGGTCCTGAGTTCAAGTCTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAGAACACCAACTGCTCTTCCAGAGAGGTCCTGAGTTCAAGTCTCAG  450

seq1  CAACCACATGGTGGCTCACAGCTATCTGAAATGGGATTTGATGCCCTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCACATGGTGGCTCACAGCTATCTGAAATGGGATTTGATGCCCTCTT  500

seq1  CTGGTGTGTGTTCGAAGACAGCTACAGTGTAGATTAAATAAATAAATAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGTGTGTTCGAAGACAGCTACAGTGTAGATTAAATAAATAAATAAG  550

seq1  TAAATAAATAAATAAATAGACAAAATATACAAACTAAATAAATAACTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAATAAATAAATAGACAAAATATACAAACTAAATAAATAACTCTT  600

seq1  AAAAAACCAAAATACATAAAACAAACCAAAGCACAAAAGGACAGGAGTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACCAAAATACATAAAACAAACCAAAGCACAAAAGGACAGGAGTGT  650

seq1  CAGAGCCTCTAAGAAATATGGTGTCGTTAGGCAACAGCCAGACTGCGCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCCTCTAAGAAATATGGTGTCGTTAGGCAACAGCCAGACTGCGCTG  700

seq1  TACAGGGAAACTAACTGGTTTTCATGACTTTAGTTCAGCATAGAAACCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGGAAACTAACTGGTTTTCATGACTTTAGTTCAGCATAGAAACCAG  750

seq1  GCTGATAGACCTGAGGACCCCGTCTACAACAGAGTGAAGGGGAAAGTATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGATAGACCTGAGGACCCCGTCTACAACAGAGTGAAGGGGAAAGTATC  800

seq1  ATAGACTATCTGAGCCTCATGCGTGAGCAGACACACACACGGGAAGCACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACTATCTGAGCCTCATGCGTGAGCAGACACACACACGGGAAGCACA  850

seq1  CACT-GTGAAAGACACACAGTCCCCATCACTGACAGAGCAGGGAGACCCA  899
      |||| ||||||||||||||||||||||||||||||||||| |||||||||
seq2  CACTGGTGAAAGACACACAGTCCCCATCACTGACAGAGCATGGAGACCCA  900

seq1  AGGCCAGCACAGAAAAGAGTGTAAGAAAGAGCAAACAAAATCAACAGTTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAGCACAGAAAAGAGTGTAAGAAAGAGCAAACAAAATCAACAGTTC  950

seq1  CCTTGGTGAGAACAGCATCTCCCATCTTGGATGTCAAGCTTTGTCATCCA  999
      ||||||||| ||||||||||||||||| ||||||||||||||||||||||
seq2  CCTTGGTGA-AACAGCATCTCCCATCTGGGATGTCAAGCTTTGTCATCCA  999

seq1  TCCATATTTAATGAGTTCTTATTGGGGACCATGGTAGCCTTGAAGATAAA  1049
      | ||||||||||||| |||||||||||||||||||||||| |||||| ||
seq2  T-CATATTTAATGAG-TCTTATTGGGGACCATGGTAGCCTGGAAGAT-AA  1046

seq1  GTGCTGAACAGGTTGTTCCTGACT-ACGCAGA--CAGCATGGTCGATGGT  1096
      |||||||||| |||||  |||||| |||||||   ||||| |||||||  
seq2  GTGCTGAACA-GTTGT--CTGACTAACGCAGAACAAGCAT-GTCGATGTG  1092

seq1  GGCATGTGTTT  1107
       ||||||||||
seq2  TGCATGTGTTT  1103