BAC Information

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BAC

Clone NameB6Ng01-044M08
Chromosome10 (Build37)10 (Build37)
Map Location 104,053,911 - 104,054,36331,142,388 - 31,143,482
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-044M08.bB6Ng01-044M08.g
ACCDH870432DH870433
length1,0621,089
definitionDH870432|Mus musculus domesticus DNA, BAC clone: B6Ng01-044M08, 5' end.DH870433|Mus musculus domesticus DNA, BAC clone: B6Ng01-044M08, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,053,911 - 104,054,363)(31,142,388 - 31,143,482)
sequence
gaattctcacctgaggaatactgaatggctgagaagcacctgaaagaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagattaaaaattcaggtgatagc
agatgctggagaggatgtggagaaagaggaacactcctctattgctggtg
gaattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatactaccaccggaggatcctgcaataactctcctgggc
atatatccagaatatgttcgaactggtaagaaggacacatgctccactat
gttcatagcagccttatttatgataaccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctatttaaaagaatgaattaatgaaattcctaggcaa
atggttggacctggagggcatcatcctgagtgaggtaacacaatcacaaa
agaagtcaaatgatatgtactcactgataagtggatattagcccagaaac
ccgagatataagatataatttgcaaaacacatgaaactgaagaagaacga
agaccaaagtgtagacactttgctccttcttagaattgcgaacaaaacac
ccatggaaggagttacagagacaaagtttggagctgagacaaaaggatgg
accatcaagagactgccatatccagggatccatcccataatcagcctcca
aatgatgacaccattgcattcactagcaagagcttgctgaaaggacccag
gtatagctgtctcttgtgagactatgccggggcctagcaaacacataagt
ggatgctcacagtcagctattggatggatcacagggccctcaatggagga
gctagagaaagtacccaagagctaaagggatctgtaaccctataggtgga
tacattatgactaccagtacccggagctctgactctagctgcaatgtatc
aaagatgactta
gaattcaaagtcagcttgggcaacttggaaggatgctgtctggaaatcaa
aacacaattggcatattagataatttgcctagcatctacatggctctggg
ttcaatcttcagtacttgacaaagacaagaaaaaagataaaagaaaggaa
aaataaaagaaaagttcagtattctactattacatgttcctgatagtgaa
atcttgaagacaatataagttgggagttgggatattaggataaaccctat
ccaagaaacaaaacaaaaaacaaacaaacaaacaaacaaacaaacaaaaa
aaccagtgagggtgctatgtaaaagttaagaggtaaatataggaaatggg
gagagaaaaatctgcaaagatgcctttgtgggagaaaaagaaacagagga
aataggtcaagctacctcaagactgaaaagagaaatttgggcaagagatg
atatggtggtctctgggaaactctctgggctgactccaccttcctcttgt
gatgttagtaaattctgatgttcacttgagcagttgtgggcttagagtct
aagagcacaaaagaaatcactggagcgctgttgtataatttactaataag
ggtacctctgagacctagggaggtattaatgaacttattgtagctgtact
ttctagagagcagctataaatattaaccaaaagtatgagaagggcaagga
gacagacaggatgtttgacttctgcagtgaggtttacttgtctgggcatt
gtagaaaaccattcagatcggatcaggaccttcttgcaagtggggtactg
aaatcaagaagcaccgacgggcttgagggaagcatgaaaatgttgtagaa
gcacaccacactctcacttttcatgacacataaggacaagctgccttctt
ccagagtcgtgagctgaagttattagccacttgtgggcgttgcattttcg
ggagatggggtgaagatgagtgagtcctcctctatagtagcagagagtgc
tgagggaggggttgtgggagctagtttaggtagaaaggaggggacctgtc
acttgatgtgaagactgtattccagcattggaatacagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053911_104054363
seq2: B6Ng01-044M08.b_44_496 (reverse)

seq1  CTCCATTGTGTAAATGTACCACATTTTCTGTATCTATTCCTCTGTTGAGG  50
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CTCCATTGTGTAAATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGG  50

seq1  GGCATCTGGGTTCTTTCCAGCTCCTGGCTATTATAAATAAGGCTGCTATG  100
      |||||||||||||||||||||| |||| ||| ||||||||||||||||||
seq2  GGCATCTGGGTTCTTTCCAGCTTCTGGTTATCATAAATAAGGCTGCTATG  100

seq1  AATATAGTGGAGCATGTGTCCTTCTTACCGGTTGGGGCATCTTCTGGATA  150
      || |||||||||||||||||||||||||| ||| |  ||| |||||||||
seq2  AACATAGTGGAGCATGTGTCCTTCTTACCAGTTCGAACATATTCTGGATA  150

seq1  TATGCCCAGAAGAGGTATTGCTGGATCCTCCGGTAGTACTATGTCCAATT  200
      ||||||||| |||| |||||| |||||||||||| ||| |||||||||||
seq2  TATGCCCAGGAGAGTTATTGCAGGATCCTCCGGTGGTAGTATGTCCAATT  200

seq1  TTCTGACGAACCGCCAGACGGATTTCCAGAGTGGTTGTACAAGCCTGCAA  250
      |||||| |||||||||||| |||||||||||||||||||||||| |||||
seq2  TTCTGAGGAACCGCCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAA  250

seq1  TCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCCACATCCTCGCCAGCA  300
      | |||||| |||| ||||||||||||||||||||||||||||| ||||||
seq2  TTCCACCAGCAATAGAGGAGTGTTCCTCTTTCTCCACATCCTCTCCAGCA  300

seq1  TCTGCTGTCACCTGAATTTTTGATCTTAGCCATTCTGACTGGTGTGAGGT  350
      |||||| |||||||||||||| ||||||||||||||||||||||||||||
seq2  TCTGCTATCACCTGAATTTTTAATCTTAGCCATTCTGACTGGTGTGAGGT  350

seq1  GGAATCTCAGGGTTGTTTTGATTTGCATTTCCCTGATGATTAAGGATGTT  400
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GGAATCTCAGGGTTGTTTTGATTTGCATTTCCCTGATGATTAAGGATGCT  400

seq1  GAACATTTTTTCAGGTGCTTCTCTGCCATTCGGTATTCCTCAGGTGAGAA  450
      ||||||| ||||||||||||||| ||||||| ||||||||||||||||||
seq2  GAACATTCTTTCAGGTGCTTCTCAGCCATTCAGTATTCCTCAGGTGAGAA  450

seq1  TTC  453
      |||
seq2  TTC  453

seq1: chr10_31142388_31143482
seq2: B6Ng01-044M08.g_65_1153 (reverse)

seq1  GCTGTA-TCCAATGCCTGGAATACAGTC-TCACATCCAGTTGACAGGTCC  48
      |||||| ||||||| ||||||||||||| ||||||| || ||||||||||
seq2  GCTGTATTCCAATG-CTGGAATACAGTCTTCACATCAAG-TGACAGGTCC  48

seq1  CCTCCCTTTCTACCTTAAACTAGCTCCCACAACCACTCCCTCAGCACTCC  98
      ||| |||||||||| ||||||||||||||||||| ||||||||||||| |
seq2  CCT-CCTTTCTACC-TAAACTAGCTCCCACAACCCCTCCCTCAGCACT-C  95

seq1  TCTGCTACTATTAGAGGAGGACTCACTCATCTTCACCCCATTCTCCCCGA  148
      |||||||||| ||||||||||||||||||||||||||||| ||| |||||
seq2  TCTGCTACTA-TAGAGGAGGACTCACTCATCTTCACCCCA-TCT-CCCGA  142

seq1  AAATGCAACGCCCACAAGTGGCTAATAACTTCAGCTCACGACTCTGGAAG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCAACGCCCACAAGTGGCTAATAACTTCAGCTCACGACTCTGGAAG  192

seq1  AAGGCAGCTTGTCCTTATGTGTCATGAAAAGTGAGAGTGTGGTGTGCTTC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGCTTGTCCTTATGTGTCATGAAAAGTGAGAGTGTGGTGTGCTTC  242

seq1  TACAACATTTTCATGCTTCCCTCAAGCCCGTCGGTGCTTCTTGATTTCAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACATTTTCATGCTTCCCTCAAGCCCGTCGGTGCTTCTTGATTTCAG  292

seq1  TACCCCACTTGCAAGAAGGTCCTGATCCGATCTGAATGGTTTTCTACAAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCCACTTGCAAGAAGGTCCTGATCCGATCTGAATGGTTTTCTACAAT  342

seq1  GCCCAGACAAGTAAACCTCACTGCAGAAGTCAAACATCCTGTCTGTCTCC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGACAAGTAAACCTCACTGCAGAAGTCAAACATCCTGTCTGTCTCC  392

seq1  TTGCCCTTCTCATACTTTTGGTTAATATTTATAGCTGCTCTCTAGAAAGT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCCTTCTCATACTTTTGGTTAATATTTATAGCTGCTCTCTAGAAAGT  442

seq1  ACAGCTACAATAAGTTCATTAATACCTCCCTAGGTCTCAGAGGTACCCTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTACAATAAGTTCATTAATACCTCCCTAGGTCTCAGAGGTACCCTT  492

seq1  ATTAGTAAATTATACAACAGCGCTCCAGTGATTTCTTTTGTGCTCTTAGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTAAATTATACAACAGCGCTCCAGTGATTTCTTTTGTGCTCTTAGA  542

seq1  CTCTAAGCCCACAACTGCTCAAGTGAACATCAGAATTTACTAACATCACA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAGCCCACAACTGCTCAAGTGAACATCAGAATTTACTAACATCACA  592

seq1  AGAGGAAGGTGGAGTCAGCCCAGAGAGTTTCCCAGAGACCACCATATCAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAAGGTGGAGTCAGCCCAGAGAGTTTCCCAGAGACCACCATATCAT  642

seq1  CTCTTGCCCAAATTTCTCTTTTCAGTCTTGAGGTAGCTTGACCTATTTCC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGCCCAAATTTCTCTTTTCAGTCTTGAGGTAGCTTGACCTATTTCC  692

seq1  TCTGTTTCTTTTTCTCCCACAAAGGCATCTTTGCAGATTTTTCTCTCCCC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTCTTTTTCTCCCACAAAGGCATCTTTGCAGATTTTTCTCTCCCC  742

seq1  ATTTCCTATATTTACCTCTTAACTTTTACATAGCACCCTCACTGGTTTTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTATATTTACCTCTTAACTTTTACATAGCACCCTCACTGGTTTTT  792

seq1  TTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTTGTTTTGTTTCTTGGATA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTTGTTTTGTTTCTTGGATA  842

seq1  GGGTTTATCCTAATATCCCAACTCCCAACTTATATTGTCTTCAAGATTTC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTATCCTAATATCCCAACTCCCAACTTATATTGTCTTCAAGATTTC  892

seq1  ACTATCAGGAACATGTAATAGTAGAATACTGAACTTTTCTTTTATTTTTC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATCAGGAACATGTAATAGTAGAATACTGAACTTTTCTTTTATTTTTC  942

seq1  CTTTCTTTTATCTTTTTTCTTGTCTTTGTCAAGTACTGAAGATTGAACCC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTTATCTTTTTTCTTGTCTTTGTCAAGTACTGAAGATTGAACCC  992

seq1  AGAGCCATGTAGATGCTAGGCAAATTATCTAATATGCCAATTGTGTTTTG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCATGTAGATGCTAGGCAAATTATCTAATATGCCAATTGTGTTTTG  1042

seq1  ATTTCCAGACAGCATCCTTCCAAGTTGCCCAAGCTGACTTTGAATTC  1095
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCAGACAGCATCCTTCCAAGTTGCCCAAGCTGACTTTGAATTC  1089