BAC Information

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BAC

Clone NameB6Ng01-044N23
Chromosome10 (Build37)
Map Location 18,142,317 - 18,143,185
singlet/doubletsinglet
Overlap geneNhsl1
Upstream geneCited2, Txlnb, LOC665321, Heca, 3110003A17Rik, Reps1, LOC100039660, Ccdc28a, LOC627646
Downstream geneHebp2, EG627729, D10Bwg1379e, EG237300, Perp, Tnfaip3, Tpi-rs5, EG637620, Olig3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-044N23.bB6Ng01-044N23.g
ACCDH870501DH870502
length8641,013
definitionDH870501|Mus musculus domesticus DNA, BAC clone: B6Ng01-044N23, 5' end.DH870502|Mus musculus domesticus DNA, BAC clone: B6Ng01-044N23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatcaaggagtctcactcctgataggaaaatctctcatccccaac
atatttactctgttttggtttaaagtttcttccaatgaaatgaaaattca
aagaattctttctaatatgagcaatcacttgagtagtttctgaagtgaaa
tgactgcagtaatagccatgttctttgtcctttcttggctccatttgaat
gctttagtagagagttgtgtgtaataactaagtctgggatgtggcgggct
tctatcagagataccttcctagtgtgctgagagctgacaggatgagggag
gagcagacaggtgagtctgactagtgggggcgggtgggggtgtccctcgc
cttttgttctttctccctttttgaatgctgtttgagatgagaatatgttc
ttttctatctgtggtttctttagttttgatgttcctgactgctgtggagg
tcacacgagggattcctctgctgacctccccagggcaggccttggaagtt
tggtctttgctctgggtcatccagaggaaggttttctaagcagatgtgcc
agggacacatcttgcttagcattgcaaagacagagggagagaagcctcaa
ccttgagggtctcaagtgtcaatttttatttcactcaaagacaaaaacca
cattcattctgttgcaaaaaaggaaaagggtgggggagcgagcccacgcc
cccctagctgcagcctttgtctacaccagcttcctggagacacttttaga
agatcggccaatagttgcactgtggcatgctgtgtgggcattctgtgttt
gacagatactgtttttcacttgatggtggagatttttaatatgaatttgt
attacatggaaaaa
gaattctcatcctaggaataccgaaaggctgagaaacacctgaaaaaatg
ttcaacatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatgactaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcggtctggcggttcctca
gaaaattggacatagtactaccggaggatcccgcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaaggacacatgctccactat
attcatagcagccttatttataatagccagaagttggaaagaacccagat
gcccctcaacagaggaatggatacaaaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttacgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacccaatcagaaa
agaactcaaatgaaatgtactcactgataagtggatattagtccagaaac
ttagtatagcgagatataaggtacaagatgcaaaacacatgaaactgaag
aagaacgaagaccaaagtgtggacactttgctccttcttagaattggaaa
caatcacccatggaagagttacagagacaaagtttggagctgagacaaaa
ggatggaccatctagagactgcatatccagggatccatcccataatagcc
tccaaacgatgacaccatggcatacactagcaagctttgtgcaggacgtg
atatagctttccttgtgagactaggcgggctagcaaccagagtggtgctc
acagtcactatgatgatccagtctcatgagaactaagaagattcaggact
aaagatgactatcggtgaccttgactacgaaccgaccttgactctgctct
atgtcaagagggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_18142317_18143185
seq2: B6Ng01-044N23.b_44_907

seq1  GAATTCATCAAGGAGTCTCACTCCTGATAGGAAAATCTCTCATCCCCAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCAAGGAGTCTCACTCCTGATAGGAAAATCTCTCATCCCCAAC  50

seq1  ATATTTACTCTGTTTTGGTTTAAAGTTTCTTCCAATGAAATGAAAATTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTACTCTGTTTTGGTTTAAAGTTTCTTCCAATGAAATGAAAATTCA  100

seq1  AAGAATTCTTTCTAATATGAGCAATCACTTGAGTAGTTTCTGAAGTGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTCTTTCTAATATGAGCAATCACTTGAGTAGTTTCTGAAGTGAAA  150

seq1  TGACTGCAGTAATAGCCATGTTCTTTGTCCTTTCTTGGCTCCATTTGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGCAGTAATAGCCATGTTCTTTGTCCTTTCTTGGCTCCATTTGAAT  200

seq1  GCTTTAGTAGAGAGTTGTGTGTAATAACTAAGTCTGGGATGTGGCGGGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTAGTAGAGAGTTGTGTGTAATAACTAAGTCTGGGATGTGGCGGGCT  250

seq1  TCTATCAGAGATACCTTCCTAGTGTGCTGAGAGCTGACAGGATGAGGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCAGAGATACCTTCCTAGTGTGCTGAGAGCTGACAGGATGAGGGAG  300

seq1  GAGCAGACAGGTGAGTCTGACTAGTGGGGGCGGGTGGGGGTGTCCCTCGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGACAGGTGAGTCTGACTAGTGGGGGCGGGTGGGGGTGTCCCTCGC  350

seq1  CTTTTGTTCTTTCTCCCTTTTTGAATGCTGTTTGAGATGAGAATATGTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGTTCTTTCTCCCTTTTTGAATGCTGTTTGAGATGAGAATATGTTC  400

seq1  TTTTCTATCTGTGGTTTCTTTAGTTTTGATGTTCCTGACTGCTGTGGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTATCTGTGGTTTCTTTAGTTTTGATGTTCCTGACTGCTGTGGAGG  450

seq1  TCACACGAGGGATTCCTCTGCTGACCTCCCCAGGGCAGGCCTTGGAAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACGAGGGATTCCTCTGCTGACCTCCCCAGGGCAGGCCTTGGAAGTT  500

seq1  TGGTCTTTGCTCTGGGTCATCCAGAGGAAGGTTTTCTAAGCAGATGTGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTTTGCTCTGGGTCATCCAGAGGAAGGTTTTCTAAGCAGATGTGCC  550

seq1  AGGGACACATCTTGCTTAGCATTGCAAAGACAGAGGGAGAGAAGCCTCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACACATCTTGCTTAGCATTGCAAAGACAGAGGGAGAGAAGCCTCAA  600

seq1  CCTTGAGGGTCTCAAGTGTCAA-TTTTATTTCACTCAAAGACAAAAACCA  649
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CCTTGAGGGTCTCAAGTGTCAATTTTTATTTCACTCAAAGACAAAAACCA  650

seq1  CATTCATTCTGTTGCAAAAAAGG-AAAGGGTGGGGGAGCGAGCCCACGCC  698
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CATTCATTCTGTTGCAAAAAAGGAAAAGGGTGGGGGAGCGAGCCCACGCC  700

seq1  CCCCTAGCTGCAGCCTTTGTCTACACCAGCTTCCTGGAGACAC-TTTAGA  747
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CCCCTAGCTGCAGCCTTTGTCTACACCAGCTTCCTGGAGACACTTTTAGA  750

seq1  AGATCGGCCAATAGTTGCACTGTGGCATGCTGTGT-GGCATTCTGTGTTT  796
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AGATCGGCCAATAGTTGCACTGTGGCATGCTGTGTGGGCATTCTGTGTTT  800

seq1  GACAGATACTGTTTTTTCCACTTGACTGGTTGTAGATTTTTTTAATAGTT  846
      ||||||||||||||||  ||||||| ||| || |||  |||||||||  |
seq2  GACAGATACTGTTTTT--CACTTGA-TGG-TGGAGA--TTTTTAATA--T  842

seq1  GAATTTGTAAATACATGGAAAAA  869
      |||||||| | ||||||||||||
seq2  GAATTTGT-ATTACATGGAAAAA  864