BAC Information

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BAC

Clone NameB6Ng01-045A15
Chromosome8 (Build37)10 (Build37)
Map Location 51,862,137 - 51,862,173123,846,992 - 123,848,126
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100039919, EG667495, LOC100039954, LOC100039966
Downstream geneLOC667517
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-045A15.bB6Ng01-045A15.g
ACCDH870614DH870615
length1891,121
definitionDH870614|Mus musculus domesticus DNA, BAC clone: B6Ng01-045A15, 5' end.DH870615|Mus musculus domesticus DNA, BAC clone: B6Ng01-045A15, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(51,862,137 - 51,862,173)(123,846,992 - 123,848,126)
sequence
atggggcttctacttgtttagcagtgttctcctgtatttatttaagtgtc
tctatttgcatatgtaccagaggatggcctagtcggccatcaatgggagg
agaggtccttggtcttgggaagatcatatgccccagtacatgggaatgcc
agggccaggaagcaggagtgggtgggttgaggagcaggg
gaattctgaggccattcctctagtatcatgatgagtgagaaaggaatatt
attatatctagaaattttcaactagaagcaagaaggaaagtcattcctca
aaatccaagtccaattcatatttaagaagcatgtaaaggcaatagtagat
tgtgatcaaatttggctggtgaaatttcttcctctaaaaataaccattct
gatttttttcaaatgttgaaaaaaaaacattgctataatattttatcatt
agttcttttcccaataaatctctgttgcaggattcattcattttcttttt
tgttcagacaaactttttatatgagtgtccagatgccatagttaatccat
aaaataattgaaattagtctaaaaatactttacttcaaaactttgtattt
atttgttaagaatcataacattttattcaaaactaattaaattccaccgt
atgatgtagaatgaagttacacaggatgctgaagaaactgatattccctc
aacttctgtgctgagattattttcaattccataaatgatttactgtcatt
gagatcattattctatatttgttattttaatttgcaatacatttctgcat
cttgataaaatggtaaaatttgttgaaacatgcaatttcccaaaattaat
cttgaaaatacatcatgaaaacatttataagccttgatatatctaagaaa
atgtttcattttagtcaattttcatttcttgagaaatctcagttttcaga
ctttgtaatgttttgcatatgcacaatgaggtatattaggatatgactca
aatctacctataaagttcattagcatttcctctatacccttcatgtataa
tctgaaaataatatatggcatatttggggcatctgtttcttaactgcaac
caggcatatgagccacagtttagattggtctagacttgaagttttcatct
tttttcttatatgctgtagtgtctatctttctcctttgatcatttcaaat
caagaggactggatgctcagagatcaaggtgtctgccctattcatgatgg
ggtcaaccagctaattgcctgtgatgcatgtgccgccagcccttgggaat
atgtcacccctggattacttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_51862137_51862173
seq2: B6Ng01-045A15.b_201_237 (reverse)

seq1  CCCTGCTCACCAACCCACCCACTCCTGCTTCCTGGCC  37
      ||||||||  |||||||||||||||||||||||||||
seq2  CCCTGCTCCTCAACCCACCCACTCCTGCTTCCTGGCC  37

seq1: chr10_123846992_123848126
seq2: B6Ng01-045A15.g_67_1187

seq1  GAATTCTGAGGCCATTCCTCTAGTATCATGATGAGTGAGAAAGGAATATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAGGCCATTCCTCTAGTATCATGATGAGTGAGAAAGGAATATT  50

seq1  ATTATATCTAGAAATTTTCAACTAGAAGCAAGAAGGAAAGTCATTCCTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATCTAGAAATTTTCAACTAGAAGCAAGAAGGAAAGTCATTCCTCA  100

seq1  AAATCCAAGTCCAATTCATATTTAAGAAGCATGTAAAGGCAATAGTAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCAAGTCCAATTCATATTTAAGAAGCATGTAAAGGCAATAGTAGAT  150

seq1  TGTGATCAAATTTGGCTGGTGAAATTTCTTCCTCTAAAAATAACCATTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATCAAATTTGGCTGGTGAAATTTCTTCCTCTAAAAATAACCATTCT  200

seq1  GATTTTTTTCAAATGTTGAAAAAAAAACATTGCTATAATATTTTATCATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTTTCAAATGTTGAAAAAAAAACATTGCTATAATATTTTATCATT  250

seq1  AGTTCTTTTCCCAATAAATCTCTGTTGCAGGATTCATTCATTTTCTTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTTTTCCCAATAAATCTCTGTTGCAGGATTCATTCATTTTCTTTTT  300

seq1  TGTTCAGACAAACTTTTTATATGAGTGTCCAGATGCCATAGTTAATCCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCAGACAAACTTTTTATATGAGTGTCCAGATGCCATAGTTAATCCAT  350

seq1  AAAATAATTGAAATTAGTCTAAAAATACTTTACTTCAAAACTTTGTATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAATTGAAATTAGTCTAAAAATACTTTACTTCAAAACTTTGTATTT  400

seq1  ATTTGTTAAGAATCATAACATTTTATTCAAAACTAATTAAATTCCACCGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTTAAGAATCATAACATTTTATTCAAAACTAATTAAATTCCACCGT  450

seq1  ATGATGTAGAATGAAGTTACACAGGATGCTGAAGAAACTGATATTCCCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGTAGAATGAAGTTACACAGGATGCTGAAGAAACTGATATTCCCTC  500

seq1  AACTTCTGTGCTGAGATTATTTTCAATTCCATAAATGATTTACTGTCATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCTGTGCTGAGATTATTTTCAATTCCATAAATGATTTACTGTCATT  550

seq1  GAGATCATTATTCTATATTTGTTATTTTAATTTGCAATACATTTCTGCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATCATTATTCTATATTTGTTATTTTAATTTGCAATACATTTCTGCAT  600

seq1  CTTGATAAAATGGTAAAATTTGTTGAAACATGCAATTTCCCAAAATTAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATAAAATGGTAAAATTTGTTGAAACATGCAATTTCCCAAAATTAAT  650

seq1  CTTGAAAATACATCATGAAAACATTTATAAGCCTTGATATATCTAAGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAAATACATCATGAAAACATTTATAAGCCTTGATATATCTAAGAAA  700

seq1  ATGTTTCATTTTAGTCAATTTTCATTTCTTGAGAAATCTCAGTTTTCAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTCATTTTAGTCAATTTTCATTTCTTGAGAAATCTCAGTTTTCAGA  750

seq1  CTTTGTAATGTTTTGCATATGCACAATGAGGTATATTAGGATATGACTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTAATGTTTTGCATATGCACAATGAGGTATATTAGGATATGACTCA  800

seq1  AATCTACCTATAAAGTTCATTAGCATTTCCTCTATACCCTTCATGTATAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTACCTATAAAGTTCATTAGCATTTCCTCTATACCCTTCATGTATAA  850

seq1  TCTGAAAATAATATATGGCATATTTGGGGCATCTGTTTCTTAACTGCAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAAATAATATATGGCATATTTGGGGCATCTGTTTCTTAACTGCAAC  900

seq1  CAGGCATATGAGGCCACAGGTTTTAGATTGGTCTAGACTTGAAGTTTTTC  950
      ||||||||||| |||||||  ||||||||||||||||||||||| |||||
seq2  CAGGCATATGA-GCCACAG--TTTAGATTGGTCTAGACTTGAAG-TTTTC  946

seq1  ATCTTTTTTCTTATATTGCTTGTAGTGTCTTATTCTTTCTCCTTTTGATC  1000
      ||||||||||||||| ||| ||||||||||   ||||||||| |||||||
seq2  ATCTTTTTTCTTATA-TGC-TGTAGTGTCT--ATCTTTCTCC-TTTGATC  991

seq1  ATTTCAAATCAAGA-GACTGGATGCTCAAGAGATCCAAGTGTCTGCCCTA  1049
      |||||||||||||| |||||||||||| ||||||| | ||||||||||||
seq2  ATTTCAAATCAAGAGGACTGGATGCTC-AGAGATCAAGGTGTCTGCCCTA  1040

seq1  TTCATGAGTGGGGTCAACACAGCTATTTGCCTGTGATGCATGTGGCCAGC  1099
      ||||||| |||||||||| |||||| ||||||||||||||||||  | ||
seq2  TTCATGA-TGGGGTCAAC-CAGCTAATTGCCTGTGATGCATGTG--CCGC  1086

seq1  CAGCCCTTGGGAATATGTCACCCCTGGATTTACTTT  1135
      |||||||||||||||||||||||||||| |||||||
seq2  CAGCCCTTGGGAATATGTCACCCCTGGA-TTACTTT  1121