BAC Information

Click to search

BAC

Clone NameB6Ng01-045D16
Chromosome10 (Build37)
Map Location 123,873,765 - 123,874,646
singlet/doubletsinglet
Overlap genenone
Upstream geneAI851790
Downstream gene4930503E24Rik, LOC671416, Slc16a7, LOC100042987, EG668313
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-045D16.g
ACCDH870747
length900
definitionDH870747|Mus musculus domesticus DNA, BAC clone: B6Ng01-045D16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccttaaatttgcataatgcttcataacttaaattattttgcagaa
acattttatttttattgtatgctagctgtaaagggtgagccccaagcatt
gtattacccttttaggaagtgatatagttcttacaataaaatgaagtcat
tcattttgtaaaatttactgcaaatagtagctatataaatccaaggcaat
agaaaaagcataatctcaaaatattgtctggttctgggtgcataatattt
ccacctgattgttaaaggtgtgtttttatttacatttatgttctgttaga
ggctatgttctttgctggggtaattttcagtacaccaggaaagaaaaaaa
taagttttctttccaaggacagagccagcaaggactgattttctttttta
aatttagaacattcatatgaaatatattaaaaagtctccaaatctgtaaa
gtcatccatgtatgaaaattttctttttctttcttttttttaattgacta
ttttatttacatttcatatgttatcccccttcccagtttcctctccgcaa
accttctatcccatttccactgcttctataggagtgctcctccaccaacc
aacccactcctgcctcactgccctatttttcctttatgctggcgcatcaa
gtctccccaagaccaagggcctcccttcctgttgatgccaggtaaggcaa
tcttctgctccaaggactgattcttaagtgtagaaccttttacatggtat
agctacagagtactagagtttcagcactctcagtggctctactatggtat
atacttcaggagcatgatctacacagaaggaactctctcagtagagtcat
ttagtgtcacacacagtcttgatgatctttagatagtcatattgcttgga

quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_123873765_123874646
seq2: B6Ng01-045D16.g_63_929

seq1  GAATTCCTTAAATTTGCATAATGCTTCATAACTTAAATTATTTTGCAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTAAATTTGCATAATGCTTCATAACTTAAATTATTTTGCAGAA  50

seq1  ACATTTTATTTTTATTGTATGCTAGCTGTAAAGGGTGAGCCCCAAGCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTATTTTTATTGTATGCTAGCTGTAAAGGGTGAGCCCCAAGCATT  100

seq1  GTATTACCCTTTTAGGAAGTGATATAGTTCTTACAATAAAATGAAGTCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTACCCTTTTAGGAAGTGATATAGTTCTTACAATAAAATGAAGTCAT  150

seq1  TCATTTTGTAAAATTTACTGCAAATAGTAGCTATATAAATCCAAGGCAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTGTAAAATTTACTGCAAATAGTAGCTATATAAATCCAAGGCAAT  200

seq1  AGAAAAAGCATAATCTCAAAATATTGTCTGGTTCTGGGTGCATAATATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAGCATAATCTCAAAATATTGTCTGGTTCTGGGTGCATAATATTT  250

seq1  CCACCTGATTGTTAAAGGTGTGTTTTTATTTACATTTATGTTCTGTTAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTGATTGTTAAAGGTGTGTTTTTATTTACATTTATGTTCTGTTAGA  300

seq1  GGCTATGTTCTTTGCTGGGGTAATTTTCAGTACACCAGGAAAGAAAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATGTTCTTTGCTGGGGTAATTTTCAGTACACCAGGAAAGAAAAAAA  350

seq1  TAAGTTTTCTTTCCAAGGACAGAGCCAGCAAGGACTGATTTTCTTTTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTTTCTTTCCAAGGACAGAGCCAGCAAGGACTGATTTTCTTTTTTA  400

seq1  AATTTAGAACATTCATATGAAATATATTAAAAAGTCTCCAAATCTGTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAGAACATTCATATGAAATATATTAAAAAGTCTCCAAATCTGTAAA  450

seq1  GTCATCCATGTATGAAAATTTTCTTTTTCTTTCTTTTTTTTAATTGACTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCCATGTATGAAAATTTTCTTTTTCTTTCTTTTTTTTAATTGACTA  500

seq1  TTTTATTTACATTTCATATGTTATCCCCCTTCCCAGTTTCCTCTCCGCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTACATTTCATATGTTATCCCCCTTCCCAGTTTCCTCTCCGCAA  550

seq1  ACCTTCTATCCCATTTCCACTGCTTCTATAGGAGTGCTCCTCCACCAACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCTATCCCATTTCCACTGCTTCTATAGGAGTGCTCCTCCACCAACC  600

seq1  AACCCACTCCTGCCTCACTGCCCTATTTTTCCTTTATGCTGGCGCATCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCACTCCTGCCTCACTGCCCTATTTTTCCTTTATGCTGGCGCATCAA  650

seq1  GTCTCCCCAAGACCAAGGGCCTCCCTTCCTGTTGATGCCAGGTAAGGCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCCCAAGACCAAGGGCCTCCCTTCCTGTTGATGCCAGGTAAGGCAA  700

seq1  TCTTCTGCTCCAAGGACTGATTCTTAAGTGTAGAACCTTTTACATGGTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTGCTCCAAGGACTGATTCTTAAGTGTAGAACCTTTTACATGGTAT  750

seq1  AGCTACAAGAGTAACTAAGAGTTTCAGCAACTCTCAGGTGGCTCTACTAT  800
      |||||| ||||| ||| ||||||||||| ||||||| |||||||||||||
seq2  AGCTAC-AGAGT-ACT-AGAGTTTCAGC-ACTCTCA-GTGGCTCTACTAT  795

seq1  GGTATATACTTCAGGGAGCATGATTCTACACAAGAAAGGAAACTTCTCTC  850
      ||||||||||||| ||||||||| ||||||||   ||||||   ||||||
seq2  GGTATATACTTCA-GGAGCATGA-TCTACACA--GAAGGAA--CTCTCTC  839

seq1  AGTAAGAGTTCATTTTAGTGTCCACACACAGT  882
      ||| |||| ||| |||||||| ||||||||||
seq2  AGT-AGAG-TCA-TTTAGTGT-CACACACAGT  867