BAC Information

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BAC

Clone NameB6Ng01-045H10
Chromosome10 (Build37)
Map Location 16,787,811 - 16,901,789
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC382457, LOC546472, LOC100039576, LOC627511
Downstream geneCited2, Txlnb, LOC665321, Heca, 3110003A17Rik, Reps1, LOC100039660
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-045H10.bB6Ng01-045H10.g
ACCDH870913DH870914
length1,092871
definitionDH870913|Mus musculus domesticus DNA, BAC clone: B6Ng01-045H10, 5' end.DH870914|Mus musculus domesticus DNA, BAC clone: B6Ng01-045H10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(16,900,672 - 16,901,789)(16,787,811 - 16,788,683)
sequence
gaattcattacttaattaaatactatatttacaatgttttcataaagtgc
caggatctattgtaaacactttacacagattgcaaagatgcctgggcata
gtggtgcatagctataatgataaaatttctggaaggcagaggcagaaaaa
aacagaataacaagagttcaatgccagcctgaatttgtcttagaaaacaa
aacaaaacaaaaaaaatgaacaaacccaaaacaccacatttaacaagttc
catgtgcagcatagccaaatgataaattaaaattggtattttaaaacatt
gagagattacccttttttcagggctgtctaggtgacacctcggatagaat
ctcatgtgatgtggtaatagcagagtgctcaggcatactctaacacacat
actaaatatatacattggttgaaatataattttagtaatataaatatagt
atgtattttatctctagctgcatacataaatgactgtttttcattttctt
taatgaaatggcttcagttgttttataaatatgtcagtaaaaattaacta
aataaatacggggctggtgagaaggctcgtcaggtaaaggctcttgctgc
ccagcctcatgaccagagtcttataccttggactcagatggcagaaaaaa
actgactccaaaaagttgtcctttgacctccacatgcatgcccactccaa
caaactaacagaaaatttaaataaataagtatataagtaagtcatgatta
ttataaaaacttggaggaatatagaaaacaatgaaggtactcttaatttt
cacaccaatcttattccatagtcgtactttaagtagttggtacatctgag
gtcacatgtggccttgacatatagttgactcatgtccgcacaggcgagaa
tgggttcccacatgtgcacatgtatatttgtacatcattctttactacag
tgatttactaggatttgtcatgtataagcagctgctgcatcatgagactg
atcttagatttttcttgagaaatgcccagattctttcactaatgcagcat
cactaacctggcattttaaggcagtagttgctgttttatgag
gaattcatattttgaagaaaagatggaatgaaattatttaaacataataa
tcatatatgaaattcttaaaattgaagaatttatcaaaaaatacaatttt
ataaagagatgattcttagacaaaccaaaccaaaactgtcactttattcc
agcatacaaggaacttatggaaaaatcaaaaccagtgaaaactccaggtt
aaataaaccttccagtaaaatagttaaatatttatattttcaggggctct
gcaaacaatctgatttctttacaaaaaaaagtattatttcaaaattagac
aatcaaaaattttatgtgttcagttgttagtgtataaaaacaaagcacat
atgagaagcaaggaaaaaagaaatagtgggtccaccttttcaggccgaag
caggattactgaataaagagatcattatacacacaggagtgtggtggact
tcctgaatcacactcatttggagacaaactcaaagacactgaacaataat
acatttgtgagtttgaataccaaaagctgactacatgagtgtatattcta
gtttttcctgtgagtccgtctgctcctctataaaatgaaggtagctaccc
cataaccttttttaatgctcacagttcaatatagtcaagtcctttatgcc
tatatttagcctatcaaaaaggctgccaattataattgtgatctattgtc
ataactgcttaactcacagggaaaggaatgagacacagaactggaactac
agtcagaagcaaaaatcaaacaggtaagatcatgtatcccttagtaagga
cttgctataggacttcaaactaaagaacagcaaatcatatgatcaacaga
caaatctacagtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_16900672_16901789
seq2: B6Ng01-045H10.b_45_1136 (reverse)

seq1  CTCATAAAACAGCAAAACTTAACCTGGCTTTAAAAATGCCAGGGTTTAGT  50
      |||||||||||||  ||||    ||| |||  |||||||||||  |||||
seq2  CTCATAAAACAGC--AACT---ACTGCCTT--AAAATGCCAGG--TTAGT  41

seq1  GGATGCTGCATTTAAGGTGAAAAGAATCCTGGGCATTTCCTTCAAAGAAA  100
       |||||||||||    ||| ||||||| |||||||||||  ||||   ||
seq2  -GATGCTGCATT---AGTG-AAAGAAT-CTGGGCATTTC--TCAA--GAA  81

seq1  AAATCTAAGATCAGTCTCAATGATGGCAGCCAAGCTGCTTATACATGAAC  150
      |||||||||||||||||| ||||| |||||  ||||||||||||||| ||
seq2  AAATCTAAGATCAGTCTC-ATGAT-GCAGC--AGCTGCTTATACATG-AC  126

seq1  AAATCCTAGTAAATCAACTGTAGTAAAAGAATGATGTACAAATATACATG  200
      ||||||||||||||| |||||||| |||||||||||||||||||||||||
seq2  AAATCCTAGTAAATC-ACTGTAGT-AAAGAATGATGTACAAATATACATG  174

seq1  TGCACATGTGGGAACCCATTCTCGCCTGTGCGGACATGAGTCAACTATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACATGTGGGAACCCATTCTCGCCTGTGCGGACATGAGTCAACTATAT  224

seq1  GTCAAGGCCACATGTGACCTCAGATGTACCAACTACTTAAAGTACGACTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGGCCACATGTGACCTCAGATGTACCAACTACTTAAAGTACGACTA  274

seq1  TGGAATAAGATTGGTGTGAAAATTAAGAGTACCTTCATTGTTTTCTATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATAAGATTGGTGTGAAAATTAAGAGTACCTTCATTGTTTTCTATAT  324

seq1  TCCTCCAAGTTTTTATAATAATCATGACTTACTTATATACTTATTTATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCAAGTTTTTATAATAATCATGACTTACTTATATACTTATTTATTT  374

seq1  AAATTTTCTGTTAGTTTGTTGGAGTGGGCATGCATGTGGAGGTCAAAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTCTGTTAGTTTGTTGGAGTGGGCATGCATGTGGAGGTCAAAGGA  424

seq1  CAACTTTTTGGAGTCAGTTTTTTTCTGCCATCTGAGTCCAAGGTATAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTTTTGGAGTCAGTTTTTTTCTGCCATCTGAGTCCAAGGTATAAGA  474

seq1  CTCTGGTCATGAGGCTGGGCAGCAAGAGCCTTTACCTGACGAGCCTTCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGTCATGAGGCTGGGCAGCAAGAGCCTTTACCTGACGAGCCTTCTC  524

seq1  ACCAGCCCCGTATTTATTTAGTTAATTTTTACTGACATATTTATAAAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCCCCGTATTTATTTAGTTAATTTTTACTGACATATTTATAAAACA  574

seq1  ACTGAAGCCATTTCATTAAAGAAAATGAAAAACAGTCATTTATGTATGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAGCCATTTCATTAAAGAAAATGAAAAACAGTCATTTATGTATGCA  624

seq1  GCTAGAGATAAAATACATACTATATTTATATTACTAAAATTATATTTCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGAGATAAAATACATACTATATTTATATTACTAAAATTATATTTCAA  674

seq1  CCAATGTATATATTTAGTATGTGTGTTAGAGTATGCCTGAGCACTCTGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGTATATATTTAGTATGTGTGTTAGAGTATGCCTGAGCACTCTGCT  724

seq1  ATTACCACATCACATGAGATTCTATCCGAGGTGTCACCTAGACAGCCCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACCACATCACATGAGATTCTATCCGAGGTGTCACCTAGACAGCCCTG  774

seq1  AAAAAAGGGTAATCTCTCAATGTTTTAAAATACCAATTTTAATTTATCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGGGTAATCTCTCAATGTTTTAAAATACCAATTTTAATTTATCAT  824

seq1  TTGGCTATGCTGCACATGGAACTTGTTAAATGTGGTGTTTTGGGTTTGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTATGCTGCACATGGAACTTGTTAAATGTGGTGTTTTGGGTTTGTT  874

seq1  CATTTTTTTTGTTTTGTTTTGTTTTCTAAGACAAATTCAGGCTGGCATTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTTTTGTTTTGTTTTGTTTTCTAAGACAAATTCAGGCTGGCATTG  924

seq1  AACTCTTGTTATTCTGTTTTTTTCTGCCTCTGCCTTCCAGAAATTTTATC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTTGTTATTCTGTTTTTTTCTGCCTCTGCCTTCCAGAAATTTTATC  974

seq1  ATTATAGCTATGCACCACTATGCCCAGGCATCTTTGCAATCTGTGTAAAG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAGCTATGCACCACTATGCCCAGGCATCTTTGCAATCTGTGTAAAG  1024

seq1  TGTTTACAATAGATCCTGGCACTTTATGAAAACATTGTAAATATAGTATT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTACAATAGATCCTGGCACTTTATGAAAACATTGTAAATATAGTATT  1074

seq1  TAATTAAGTAATGAATTC  1118
      ||||||||||||||||||
seq2  TAATTAAGTAATGAATTC  1092

seq1: chr10_16787811_16788683
seq2: B6Ng01-045H10.g_67_937

seq1  GAATTCATATTTTGAAGAAAAGATGGAATGAAATTATTTAAACATAATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATTTTGAAGAAAAGATGGAATGAAATTATTTAAACATAATAA  50

seq1  TCATATATGAAATTCTTAAAATTGAAGAATTTATCAAAAAATACAATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATATGAAATTCTTAAAATTGAAGAATTTATCAAAAAATACAATTTT  100

seq1  ATAAAGAGATGATTCTTAGACAAACCAAACCAAAACTGTCACTTTATTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGAGATGATTCTTAGACAAACCAAACCAAAACTGTCACTTTATTCC  150

seq1  AGCATACAAGGAACTTATGGAAAAATCAAAACCAGTGAAAACTCCAGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATACAAGGAACTTATGGAAAAATCAAAACCAGTGAAAACTCCAGGTT  200

seq1  AAATAAACCTTCCAGTAAAATAGTTAAATATTTATATTTTCAGGGGCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAACCTTCCAGTAAAATAGTTAAATATTTATATTTTCAGGGGCTCT  250

seq1  GCAAACAATCTGATTTCTTTACAAAAAAAAGTATTATTTCAAAATTAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACAATCTGATTTCTTTACAAAAAAAAGTATTATTTCAAAATTAGAC  300

seq1  AATCAAAAATTTTATGTGTTCAGTTGTTAGTGTATAAAAACAAAGCACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAAAATTTTATGTGTTCAGTTGTTAGTGTATAAAAACAAAGCACAT  350

seq1  ATGAGAAGCAAGGAAAAAAGAAATAGTGGGTCCACCTTTTCAGGCCGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAAGCAAGGAAAAAAGAAATAGTGGGTCCACCTTTTCAGGCCGAAG  400

seq1  CAGGATTACTGAATAAAGAGATCATTATACACACAGGAGTGTGGTGGACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATTACTGAATAAAGAGATCATTATACACACAGGAGTGTGGTGGACT  450

seq1  TCCTGAATCACACTCATTTGGAGACAAACTCAAAGACACTGAACAATAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAATCACACTCATTTGGAGACAAACTCAAAGACACTGAACAATAAT  500

seq1  ACATTTGTGAGTTTGAATACCAAAAGCTGACTACATGAGTGTATATTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTGTGAGTTTGAATACCAAAAGCTGACTACATGAGTGTATATTCTA  550

seq1  GTTTTTCCTGTGAGTCCGTCTGCTCCTCTATAAAATGAAGGTAGCTACCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTCCTGTGAGTCCGTCTGCTCCTCTATAAAATGAAGGTAGCTACCC  600

seq1  CATAACCTTTTTTAATGCTCACAGTTCAATATAGTCAAGTCCTTTATGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAACCTTTTTTAATGCTCACAGTTCAATATAGTCAAGTCCTTTATGCC  650

seq1  TATATTTAGCCTATCAAAAAGGCTGCCAATTATAATTGTGATCTATTGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTAGCCTATCAAAAAGGCTGCCAATTATAATTGTGATCTATTGTC  700

seq1  ATAACTGCTTAACTCACAGGGAAAGGAATGAGACACAGAACTGGAACTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTGCTTAACTCACAGGGAAAGGAATGAGACACAGAACTGGAACTAC  750

seq1  AGTCAGAAGCAAAAATCAAAACAGGTAAGATCATGTATCCCTTAGTAAGG  800
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AGTCAGAAGCAAAAATC-AAACAGGTAAGATCATGTATCCCTTAGTAAGG  799

seq1  ACCTTGCTATAGGACTTCAAACTAAAGAACAGCAAATCATATGATCAACA  850
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  A-CTTGCTATAGGACTTCAAACTAAAGAACAGCAAATCATATGATCAACA  848

seq1  GACAAATCTACAGTGTGTGTGTG  873
      |||||||||||||||||||||||
seq2  GACAAATCTACAGTGTGTGTGTG  871