BAC Information

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BAC

Clone NameB6Ng01-045I18
Chromosome10 (Build37)
Map Location 83,557,509 - 83,700,801
singlet/doubletdoublet
Overlap genenone
Upstream geneChst11, Slc41a2, D10Wsu102e, LOC666748, Aldh1l2, A230046K03Rik, Appl2, 1500009L16Rik, LOC100041225, C230099D08Rik
Downstream geneLOC432482, Nuak1, Ckap4, Tcp11l2, Polr3b, Rfx4, EG625690, Ric8b, Fhl4, AI597468, Mterfd3, Cry1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-045I18.bB6Ng01-045I18.g
ACCDH870975DH870976
length950978
definitionDH870975|Mus musculus domesticus DNA, BAC clone: B6Ng01-045I18, 5' end.DH870976|Mus musculus domesticus DNA, BAC clone: B6Ng01-045I18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(83,699,842 - 83,700,801)(83,557,509 - 83,558,488)
sequence
gaattcagatctcagccctgccatgaccagcaagctagctcagcctcctg
gagcctcaggttccagtctatgaaaaggaatgtcaatacctacctccaag
acctatggagattattgaggctagaggcacacagtaggtcatgatcgaag
gatgatagctataaatacatcgtattccgaaggaaagttctctgtagcct
aattctcctatcttcttttattagtacctctattgatgcactgagtcatc
cttatatatttactgagtgcctactgcccttcagaaattgtagtctttgc
tcagggtctgccctgttcctgatcaggcctttcagccaggatgggtcaag
tacccaaggatcagaaatccaaactccagtggcttaaccaaaaaaatacc
ctgcttcccaaatcagaaattggagaattggaggtagggatggtgaagca
gatctgaggaccctgcacatctccccacctcagtctcctcctgtctttct
gctccactagccacacccagaagccacccctaaaccaatcaggttttgtc
agcaaagacaaaggagaaagtagctgctgcaagtagctaaagtaccagct
caggtgagtatcatttagcaagcctgggggacctgccaagcactgccggt
acttcatttattctctctgaatttgaatattcattaacatatgaggctat
accactccatgtgaaggagcgaggtactcctcatccccctctttttctat
ctgtactgacaaaggatgcccagccatcctgtgtactggctctgggtaaa
gtgggtggggttgattccctccccttttccccttccctccttctcttctc
cgttccttctcatccttatatcttcccccttccctccctttcctccttct
ctttacttctctttccctacttgctctcagaatggttttgtcaaggaaat

gaattcttcactactctggcctctgtagtagagggacaggacaggaaggg
gtgagggtaggtgatgatttagccagttacctgtgtctgccatcatggat
cacaagaggctttcacgggcccactgctaatctccctgaatggaccacag
aaagcaacagagccagcagacccttaacacctaaaggataaggaggtggg
agaacttcaaaattagtttcacagaagtttaggacccagctctgtcctct
actctctattttctcagctacaatagcactattgcaaagactgattactt
tagcgtcttagttaggatttcattgctgtgaagagacgccatgaccatag
caactcttactggggctggtttacagtttcagaggttcagtccattatca
tgatggggagcatggcagcatccaagacagacatggtactggaggagcca
agagttctacatcttgatccacaggcatcagacggagactgttgggcata
gtttgagcataggagccctcaaagcctgcaaccactatgacacacttcct
ccaacaaggccacacctactccaataaggacacacctcctaatagcacct
ctgcctatggccaaagcattcaaacacatcagtctgggggtggggcattt
ctaatcaaagcaccacacatagtcagaggacaggacacagaagatctgat
taggccattaacctctctgtttcaggacaagttgtggtaaagttatcccc
caccccaaattctttgattttgttgctgtgttgagatctccaatttctgg
gttcagatgttcttcactgttctatgaggccacaaagtactcagatttcc
aatgagctaaaaactgtggaaatttatagattatgtggcttccttgctga
gtgatggggtattattcttttatgattttctatatgataagcaagtaacg
taaaactctgacatttaaactgattata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_83699842_83700801
seq2: B6Ng01-045I18.b_41_990 (reverse)

seq1  ATTTCCTTAGCAAAACCAGTACTGAGAGACAAGTAGGGAAAGAGAAAGAA  50
      ||||||||  |||||||| | ||||||| ||||||||||||||| ||| |
seq2  ATTTCCTTGACAAAACCA-TTCTGAGAG-CAAGTAGGGAAAGAG-AAGTA  47

seq1  AAGAGAAGGGAAGGAAAGGGAAGGGAAGGGGGAAGAGAGAAGGGATGAGA  100
      |||||||||  ||||||||| ||||||||||||||| | || ||||||||
seq2  AAGAGAAGG--AGGAAAGGG-AGGGAAGGGGGAAGATATAA-GGATGAGA  93

seq1  AGGAAAGGAGAAGAGAAAGGAGGGGAAGGGGAAAAGGGGAGTGAATCAAC  150
      ||||| ||||||||| ||||| ||||||||||||||||||| ||||||||
seq2  AGGAACGGAGAAGAG-AAGGA-GGGAAGGGGAAAAGGGGAGGGAATCAAC  141

seq1  CCCACCCACTTTACCCAGAGCCAGTACACAGGATGGCTGGGCATCCTTTT  200
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CCCACCCACTTTACCCAGAGCCAGTACACAGGATGGCTGGGCATCC-TTT  190

seq1  GTCAGTACAGATAGAAAAAGAGGGGGATGAGGAGTACCTCGCTCCTTCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTACAGATAGAAAAAGAGGGGGATGAGGAGTACCTCGCTCCTTCAC  240

seq1  ATGGAGTGGTATAGCCTCATATGTTAATGAATATTCAAATTCAGAGAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGTGGTATAGCCTCATATGTTAATGAATATTCAAATTCAGAGAGAA  290

seq1  TAAATGAAGTACCGGCAGTGCTTGGCAGGTCCCCCAGGCTTGCTAAATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGAAGTACCGGCAGTGCTTGGCAGGTCCCCCAGGCTTGCTAAATGA  340

seq1  TACTCACCTGAGCTGGTACTTTAGCTACTTGCAGCAGCTACTTTCTCCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCACCTGAGCTGGTACTTTAGCTACTTGCAGCAGCTACTTTCTCCTT  390

seq1  TGTCTTTGCTGACAAAACCTGATTGGTTTAGGGGTGGCTTCTGGGTGTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTGCTGACAAAACCTGATTGGTTTAGGGGTGGCTTCTGGGTGTGG  440

seq1  CTAGTGGAGCAGAAAGACAGGAGGAGACTGAGGTGGGGAGATGTGCAGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTGGAGCAGAAAGACAGGAGGAGACTGAGGTGGGGAGATGTGCAGGG  490

seq1  TCCTCAGATCTGCTTCACCATCCCTACCTCCAATTCTCCAATTTCTGATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAGATCTGCTTCACCATCCCTACCTCCAATTCTCCAATTTCTGATT  540

seq1  TGGGAAGCAGGGTATTTTTTTGGTTAAGCCACTGGAGTTTGGATTTCTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAGCAGGGTATTTTTTTGGTTAAGCCACTGGAGTTTGGATTTCTGA  590

seq1  TCCTTGGGTACTTGACCCATCCTGGCTGAAAGGCCTGATCAGGAACAGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGGGTACTTGACCCATCCTGGCTGAAAGGCCTGATCAGGAACAGGG  640

seq1  CAGACCCTGAGCAAAGACTACAATTTCTGAAGGGCAGTAGGCACTCAGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACCCTGAGCAAAGACTACAATTTCTGAAGGGCAGTAGGCACTCAGTA  690

seq1  AATATATAAGGATGACTCAGTGCATCAATAGAGGTACTAATAAAAGAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATAAGGATGACTCAGTGCATCAATAGAGGTACTAATAAAAGAAGA  740

seq1  TAGGAGAATTAGGCTACAGAGAACTTTCCTTCGGAATACGATGTATTTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGAATTAGGCTACAGAGAACTTTCCTTCGGAATACGATGTATTTAT  790

seq1  AGCTATCATCCTTCGATCATGACCTACTGTGTGCCTCTAGCCTCAATAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATCATCCTTCGATCATGACCTACTGTGTGCCTCTAGCCTCAATAAT  840

seq1  CTCCATAGGTCTTGGAGGTAGGTATTGACATTCCTTTTCATAGACTGGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATAGGTCTTGGAGGTAGGTATTGACATTCCTTTTCATAGACTGGAA  890

seq1  CCTGAGGCTCCAGGAGGCTGAGCTAGCTTGCTGGTCATGGCAGGGCTGAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGGCTCCAGGAGGCTGAGCTAGCTTGCTGGTCATGGCAGGGCTGAG  940

seq1  ATCTGAATTC  960
      ||||||||||
seq2  ATCTGAATTC  950

seq1: chr10_83557509_83558488
seq2: B6Ng01-045I18.g_68_1045

seq1  GAATTCTTCACTACTCTGGCCTCTGTAGTAGAGGGACAGGACAGGAAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCACTACTCTGGCCTCTGTAGTAGAGGGACAGGACAGGAAGGG  50

seq1  GTGAGGGTAGGTGATGATTTAGCCAGTTACCTGTGTCTGCCATCATGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGGTAGGTGATGATTTAGCCAGTTACCTGTGTCTGCCATCATGGAT  100

seq1  CACAAGAGGCTTTCACGGGCCCACTGCTAATCTCCCTGAATGGACCACAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGAGGCTTTCACGGGCCCACTGCTAATCTCCCTGAATGGACCACAG  150

seq1  AAAGCAACAGAGCCAGCAGACCCTTAACACCTAAAGGATAAGGAGGTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAACAGAGCCAGCAGACCCTTAACACCTAAAGGATAAGGAGGTGGG  200

seq1  AGAACTTCAAAATTAGTTTCACAGAAGTTTAGGACCCAGCTCTGTCCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTTCAAAATTAGTTTCACAGAAGTTTAGGACCCAGCTCTGTCCTCT  250

seq1  ACTCTCTATTTTCTCAGCTACAATAGCACTATTGCAAAGACTGATTACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCTATTTTCTCAGCTACAATAGCACTATTGCAAAGACTGATTACTT  300

seq1  TAGCGTCTTAGTTAGGATTTCATTGCTGTGAAGAGACGCCATGACCATAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCGTCTTAGTTAGGATTTCATTGCTGTGAAGAGACGCCATGACCATAG  350

seq1  CAACTCTTACTGGGGCTGGTTTACAGTTTCAGAGGTTCAGTCCATTATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCTTACTGGGGCTGGTTTACAGTTTCAGAGGTTCAGTCCATTATCA  400

seq1  TGATGGGGAGCATGGCAGCATCCAAGACAGACATGGTACTGGAGGAGCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGGGAGCATGGCAGCATCCAAGACAGACATGGTACTGGAGGAGCCA  450

seq1  AGAGTTCTACATCTTGATCCACAGGCATCAGACGGAGACTGTTGGGCATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTCTACATCTTGATCCACAGGCATCAGACGGAGACTGTTGGGCATA  500

seq1  GTTTGAGCATAGGAGCCCTCAAAGCCTGCAACCACTATGACACACTTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAGCATAGGAGCCCTCAAAGCCTGCAACCACTATGACACACTTCCT  550

seq1  CCAACAAGGCCACACCTACTCCAATAAGGACACACCTCCTAATAGCACCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAAGGCCACACCTACTCCAATAAGGACACACCTCCTAATAGCACCT  600

seq1  CTGCCTATGGCC-AAGCATTCAAACACATCAGTCTGGGGGTGGGGCATTT  649
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CTGCCTATGGCCAAAGCATTCAAACACATCAGTCTGGGGGTGGGGCATTT  650

seq1  CTAATCAAAGCACCACACATAGTCAGAGGACAGGACACAGAAGATCTGAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATCAAAGCACCACACATAGTCAGAGGACAGGACACAGAAGATCTGAT  700

seq1  TAGGCCATTAACCTCTCTG-TTCAGGACAAGTTGTGGTAAAGTTATCCCC  748
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TAGGCCATTAACCTCTCTGTTTCAGGACAAGTTGTGGTAAAGTTATCCCC  750

seq1  CACCCCAAATTCTTTGATTTTGTTGCTGTGTTGAGATCTCCAATTTCTGG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCAAATTCTTTGATTTTGTTGCTGTGTTGAGATCTCCAATTTCTGG  800

seq1  GTTCAGATGTTCTTCACTGTTCTATGAGGCCACAAAGTACTCAGATTTCC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGATGTTCTTCACTGTTCTATGAGGCCACAAAGTACTCAGATTTCC  850

seq1  AATGAGCTAAAAACTGTGGAAATTTATAGATTATGTGGCTTCCTTGCTGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGCTAAAAACTGTGGAAATTTATAGATTATGTGGCTTCCTTGCTGA  900

seq1  GTGATGGGGTATTATTCTTTTATGAATTTTTCTATATGATAAGCAAGTAA  948
      |||||||||||||||||||||||||  |||||||||||||||||||||||
seq2  GTGATGGGGTATTATTCTTTTATGA--TTTTCTATATGATAAGCAAGTAA  948

seq1  CGTAAAACTCTGACATTTTAAAACTGATTATA  980
      ||||||||||||||||||  ||||||||||||
seq2  CGTAAAACTCTGACATTT--AAACTGATTATA  978