BAC Information

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BAC

Clone NameB6Ng01-045L16
Chromosome10 (Build37)
Map Location 60,911,421 - 61,030,745
singlet/doubletdoublet
Overlap geneEif4ebp2, D830039M14Rik, Lrrc20
Upstream geneCdh23, Slc29a3, Unc5b, Pcbd1, Sgpl1, 1700021K02Rik, Adamts14, Prf1, EG237361, X99384, Nodal
Downstream geneNpffr1, Ppa1, Sar1a, Tysnd1, Aifm2, H2afy2, LOC100039284, Col13a1, EG436164, EG432466, 2010107G23Rik, Neurog3, Tspan15, Tacr2, Hk1, 2210417K05Rik, Hkdc1, Supv3l1, Vps26a, Srgn, 2510003E04Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-045L16.bB6Ng01-045L16.g
ACCDH871101DH871102
length1,158721
definitionDH871101|Mus musculus domesticus DNA, BAC clone: B6Ng01-045L16, 5' end.DH871102|Mus musculus domesticus DNA, BAC clone: B6Ng01-045L16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,911,421 - 60,912,610)(61,030,025 - 61,030,745)
sequence
gaattctttttgttgttgtttttcaagacagggtttttctgtctagccct
ggctgtcctggaactcactctgtagaccaggctggcctcgaactcagaaa
tccgcctgcctctgcctcccgagtgctgggattaaaggcgtgcaccacca
ccgcctggcttggctttgaattcttgatcctttctcttcatctacaggcc
acctgcctaggtctgctgtcttgttccctgtgaagtgctgaccgaccaca
aaattcactgaaggccttatcaaccaccaagatataatgactcagtgaaa
ggaagggagataaagcatcagaggggcagaaatgttcccaagcaggaagt
gtcaggaaagctcagaggtaaaatgctcaccacacaagtctgacgacctg
agtttgatcccagaaaccccagtattaggaagtcaaaagttgctctctga
cctccactggcaaaacagcacaggagtgcatgcgctcacacatacataca
cctcaataccagtagtttgttttttttaaatgagcatacatctgtgtgcc
atatgccatgtgtgccaagctggtgaaggagagatgggaatttcagatct
atctcctggagctggagttacaggctgcccagtgtggatgctgggaactg
aactcaggtcttccataatactggcaggcacgttcttaactgccgagccc
tctctctctctttagccccagtaaagtccaccttaaaatcattccaaagg
ggaaaaagccagtaagcactgtacatctctaaacaccaccaagctaaatg
ctataaaagactgcccagcatgccatggtggtacatatttttaaacccag
caccagagaggcagaggcaggtggaaccctgagtttgagctggccagggc
tacacaatgagaccctgtctcaaacacagttcagctctaaaccctacagt
gcatctcttataccaggagcagccctcctcatcaaatccaaactgctagg
catgttgctttaatgcactgctcagagcagagcaggggctcctcagtgag
tttcaggacagggataccaccgtaaaggtaaatggattgttccgtaattc
ctctcaagcatctcgaacagtcagtgcagcagcttctatcttaagcatca
ggccttcc
ggtgtggtgggccacctgaatatgctgaataaccccagcagttgtggggc
tctggtggagggtagggatgtagttcagctgacagagtacccgcctggca
cgcaggaaaacactcaggttatccccagcactgcataaccagctcagggg
tggtggtacacatctgtaactttatcatttgggaggtagaggcaggagga
tcacaagtttaaggtcatcctcggtaaggccacatctgtcacaaaagaag
ggactgtctgaggcaggaggactaggagttcgaggcccgtctgggataca
tactgaacaaaaacctgacagattcatttaaatttctcttggtctactcc
tgtatggaaggggttgcaaagccttgtgtcctaggtgggggctttagcca
aagacttgccaaaccttgctgagaaagactgcaatcaggataaatgccct
gccctcccggatgctccttcctgggctctatcgatgggaggctgggtaat
caatcctggcagcgtccaagtaggcagagtttacagacatcactgccctg
aagccagcttgacttgctcttgctggtcattagcactattgaccagttgt
gtgaatccagagggaccggctgagaggcaaagtaatgttctgagtaatgt
tcttcatccgtgtgacccgatggcccaaaaggatgctgaaaggaggaggg
agaggaggagggagaggaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_60911421_60912610
seq2: B6Ng01-045L16.b_42_1199

seq1  GAATTCTTTTTGTTGTTGTTTTTCAAGACAGGGTTTTTCTGTCTAGCCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTGTTGTTGTTTTTCAAGACAGGGTTTTTCTGTCTAGCCCT  50

seq1  GGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAA  100

seq1  TCCGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCGTGCACCACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCGTGCACCACCA  150

seq1  CCGCCTGGCTTGGCTTTGAATTCTTGATCCTTTCTCTTCATCTACAGGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCCTGGCTTGGCTTTGAATTCTTGATCCTTTCTCTTCATCTACAGGCC  200

seq1  ACCTGCCTAGGTCTGCTGTCTTGTTCCCTGTGAAGTGCTGACCGACCACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCCTAGGTCTGCTGTCTTGTTCCCTGTGAAGTGCTGACCGACCACA  250

seq1  AAATTCACTGAAGGCCTTATCAACCACCAAGATATAATGACTCAGTGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCACTGAAGGCCTTATCAACCACCAAGATATAATGACTCAGTGAAA  300

seq1  GGAAGGGAGATAAAGCATCAGAGGGGCAGAAATGTTCCCAAGCAGGAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGGAGATAAAGCATCAGAGGGGCAGAAATGTTCCCAAGCAGGAAGT  350

seq1  GTCAGGAAAGCTCAGAGGTAAAATGCTCACCACACAAGTCTGACGACCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGAAAGCTCAGAGGTAAAATGCTCACCACACAAGTCTGACGACCTG  400

seq1  AGTTTGATCCCAGAAACCCCAGTATTAGGAAGTCAAAAGTTGCTCTCTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGATCCCAGAAACCCCAGTATTAGGAAGTCAAAAGTTGCTCTCTGA  450

seq1  CCTCCACTGGCAAAACAGCACAGGAGTGCATGCGCTCACACATACATACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCACTGGCAAAACAGCACAGGAGTGCATGCGCTCACACATACATACA  500

seq1  CCTCAATACCAGTAGTTTGTTTTTTTTAAATGAGCATACATCTGTGTGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAATACCAGTAGTTTGTTTTTTTTAAATGAGCATACATCTGTGTGCC  550

seq1  ATATGCCATGTGTGCCAAGCTGGTGAAGGAGAGATGGGAATTTCAGATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCCATGTGTGCCAAGCTGGTGAAGGAGAGATGGGAATTTCAGATCT  600

seq1  ATCTCCTGGAGCTGGAGTTACAGGCTGCCCAGTGTGGATGCTGGGAACTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCTGGAGCTGGAGTTACAGGCTGCCCAGTGTGGATGCTGGGAACTG  650

seq1  AACTCAGGTCTTCCATAATACTGGCAGGCACGTTCTTAACTGCCGAGCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAGGTCTTCCATAATACTGGCAGGCACGTTCTTAACTGCCGAGCCC  700

seq1  TCTCTCTCTCTTTAGCCCCAGTAAAGTCCACCTTAAAATCATTCCAAAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTTTAGCCCCAGTAAAGTCCACCTTAAAATCATTCCAAAGG  750

seq1  GGAAAAAGCCAGTAAGCACTGTACATCTCTAAACACCACCAAGCTAAATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAAGCCAGTAAGCACTGTACATCTCTAAACACCACCAAGCTAAATG  800

seq1  CTATAAAAGACTGCCCAGCATGCCATGGTGGTACATATTTTTAAACCCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAAAAGACTGCCCAGCATGCCATGGTGGTACATATTTTTAAACCCAG  850

seq1  CACCAGAGAGGCAGAGGCAGGTGGAACCCTGAGTTTGAGGCTGGCCAGGG  900
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CACCAGAGAGGCAGAGGCAGGTGGAACCCTGAGTTTGA-GCTGGCCAGGG  899

seq1  CTACACAATGAGACCCTGTCTCAAAAACACAGTTCAGCTCTAAACCCTAC  950
      ||||||||||||||||||||||  ||||||||||||||||||||||||||
seq2  CTACACAATGAGACCCTGTCTC--AAACACAGTTCAGCTCTAAACCCTAC  947

seq1  AGTGCCATCTCCTTATAACCAGGAAGCAAGCCCTCCTCATCAAAATCCCA  1000
      |||| ||||| ||||| |||||| ||| ||||||||||||| ||||||  
seq2  AGTG-CATCT-CTTAT-ACCAGG-AGC-AGCCCTCCTCATC-AAATCC--  989

seq1  AAACTGCTAGGCATGGTTGCCTTTAATGCAACTGCTCAGGAGGCAGAGGC  1050
      |||||||||||||| |||| ||||||||| |||||||||   ||||| ||
seq2  AAACTGCTAGGCAT-GTTG-CTTTAATGC-ACTGCTCAG--AGCAGA-GC  1033

seq1  AGGGGCCTCTCAGTGAGTTCCAGGGACAGGGATACCACCGTAGAAGGGTA  1100
      ||||||  ||||||||||| || ||||||||||||||||||  || ||||
seq2  AGGGGCTCCTCAGTGAGTTTCA-GGACAGGGATACCACCGT--AAAGGTA  1080

seq1  AATGAATGTTTCTGGTAGATCCTCCCAAGCATCTCAGAACTAGGTCAAGT  1150
      |||| ||  |||  |||  ||||| |||||||||| ||||   ||||   
seq2  AATGGATTGTTC-CGTAATTCCTCTCAAGCATCTC-GAAC--AGTCA--G  1124

seq1  TGCAAGGCAGCTTCTATCTTTAAAGCACTACAGGCCTTCC  1190
      ||||  ||||||||||||||  |||||   ||||||||||
seq2  TGCA--GCAGCTTCTATCTT--AAGCA--TCAGGCCTTCC  1158

seq1: chr10_61030025_61030745
seq2: B6Ng01-045L16.g_74_794 (reverse)

seq1  TCTTCCTCTCCCTCCTCCTCTCCCTCCTCCTTTCAGCATCCTTTTGGGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTCTCCCTCCTCCTCTCCCTCCTCCTTTCAGCATCCTTTTGGGCC  50

seq1  ATCGGGTCACACGGATGAAGAACATTACTCAGAACATTACTTTGCCTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGGGTCACACGGATGAAGAACATTACTCAGAACATTACTTTGCCTCTC  100

seq1  AGCCGGTCCCTCTGGATTCACACAACTGGTCAATAGTGCTAATGACCAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCGGTCCCTCTGGATTCACACAACTGGTCAATAGTGCTAATGACCAGC  150

seq1  AAGAGCAAGTCAAGCTGGCTTCAGGGCAGTGATGTCTGTAAACTCTGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCAAGTCAAGCTGGCTTCAGGGCAGTGATGTCTGTAAACTCTGCCT  200

seq1  ACTTGGACGCTGCCAGGATTGATTACCCAGCCTCCCATCGATAGAGCCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGACGCTGCCAGGATTGATTACCCAGCCTCCCATCGATAGAGCCCA  250

seq1  GGAAGGAGCATCCGGGAGGGCAGGGCATTTATCCTGATTGCAGTCTTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGAGCATCCGGGAGGGCAGGGCATTTATCCTGATTGCAGTCTTTCT  300

seq1  CAGCAAGGTTTGGCAAGTCTTTGGCTAAAGCCCCCACCTAGGACACAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAGGTTTGGCAAGTCTTTGGCTAAAGCCCCCACCTAGGACACAAGG  350

seq1  CTTTGCAACCCCTTCCATACAGGAGTAGACCAAGAGAAATTTAAATGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCAACCCCTTCCATACAGGAGTAGACCAAGAGAAATTTAAATGAAT  400

seq1  CTGTCAGGTTTTTGTTCAGTATGTATCCCAGACGGGCCTCGAACTCCTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAGGTTTTTGTTCAGTATGTATCCCAGACGGGCCTCGAACTCCTAG  450

seq1  TCCTCCTGCCTCAGACAGTCCCTTCTTTTGTGACAGATGTGGCCTTACCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTGCCTCAGACAGTCCCTTCTTTTGTGACAGATGTGGCCTTACCG  500

seq1  AGGATGACCTTAAACTTGTGATCCTCCTGCCTCTACCTCCCAAATGATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGACCTTAAACTTGTGATCCTCCTGCCTCTACCTCCCAAATGATAA  550

seq1  AGTTACAGATGTGTACCACCACCCCTGAGCTGGTTATGCAGTGCTGGGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACAGATGTGTACCACCACCCCTGAGCTGGTTATGCAGTGCTGGGGA  600

seq1  TAACCTGAGTGTTTTCCTGCGTGCCAGGCGGGTACTCTGTCAGCTGAACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTGAGTGTTTTCCTGCGTGCCAGGCGGGTACTCTGTCAGCTGAACT  650

seq1  ACATCCCTACCCTCCACCAGAGCCCCACAACTGCTGGGGTTATTCAGCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCCTACCCTCCACCAGAGCCCCACAACTGCTGGGGTTATTCAGCAT  700

seq1  ATTCAGGTGGCCCACCACACC  721
      |||||||||||||||||||||
seq2  ATTCAGGTGGCCCACCACACC  721