BAC Information

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BAC

Clone NameB6Ng01-045P03
Chromosome10 (Build37)
Map Location 22,832,523 - 22,975,111
singlet/doubletdoublet
Overlap geneEya4
Upstream geneLOC100039992, E030030I06Rik, LOC665543, Ube2q2l, Raet1e, LOC100040023, LOC100038830, LOC667280, EG667281, LOC432438, Raet1d, LOC667299, LOC667303, LOC100040072, LOC100040078, Slc2a12, Tbpl1, Tcf21
Downstream geneRps12, 1110021L09Rik, Vnn3, Vnn1, Taar1, Taar2, Taar3, Taar4, Taar5, Taar6, Taar7a, Taar7b, Taar7c-ps, Taar7d, Taar7e, LOC628480, Taar7f, Taar8a, Taar8b, Taar8c, Taar9, Stx7, Moxd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-045P03.bB6Ng01-045P03.g
ACCDH871252DH871253
length1,0331,049
definitionDH871252|Mus musculus domesticus DNA, BAC clone: B6Ng01-045P03, 5' end.DH871253|Mus musculus domesticus DNA, BAC clone: B6Ng01-045P03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,832,523 - 22,833,576)(22,974,046 - 22,975,111)
sequence
gaattcttacacacaattcatcaaattgttttccgtacattttgaggctt
tgtgaaaatgtcccaggtattaatgctgaaatatctggataccatagcaa
atttcatagcccattagtcagggggcattggcttgtttttctaaggcctt
ttttttttctattcatctattcatttcttaaggtcacatatccttgagaa
agccttaaggtcattcttagaaaaatctaagaataaggtgttgacacaat
tcttggagaaatgagcatgactccacatcatctacacaatttccaggttt
tcctgccccagagtccctgccgtttgattgattatgccacagttatagat
atcatgactcaggaagatccgtgtccaagccacttcatctgtccggtact
tcctgcattatcatgtccttcctaagctttctacacatcgaccccaattg
ttaacctttatagacacacagtcaaatctaacttattttgagccaaacat
ttcaaacagttgcaatggacaactttgtcccaggcttgcctcttgagttc
ttggcagccttcccttttgtgtagaccaaatttgagggactaccaagctg
aacccagaagactacatgtctgtcagactttacattatattgtgacactg
agaagtaaagagtgctcatgtctgccccagttaggccaggaagtcaaggg
cagcccccaaagaggactttctgttattggtgaagcttctgatcatgtga
ccaggaagggaccacaggccagatttgacagataaatttactttcatgtc
ctaaatacggggctcctctttcactccagcaacctttttatgtatctgct
ctctggataacatctctttttatgcctaagtgttacccacacattagtta
actgtgtctttatgattacgtaatcagaaataaactatgaaatgataaag
taaagtatctatgcacagcatcgctcacatttatatgcacaccacgcagt
cacgcatgcgtacatgcagccaacgtagcacac
gaattcctatttacaaatgttgtatgctcttaccttagaagtgcctcttt
gtaggtgtcggcttcatttctttttaattgtgcccgcgggttcacttaag
tttgaatctatctatgataattgtttcaatataaatttcttcaaattata
ttatatccattatttctggttttgtggctaatgactaatattttatctgg
ttacacttttggttttttttttttttgcatgactagaatcatttcatggg
ataatgaatataattacttataatctagattttatcatctccattcttgg
atttggaactcttgtcttaaaatgtcattaagtgattactaaattcgttt
gagttttagaagtatgggtttttacacagggctagcattcaataccaggt
ctttgtgcgtccaaggcaaggactctattgttaatcattatctccaacca
catgctggtgtctatgtctgcatagcttagttttgggcagctatgtgatt
gacaccctgtacaaatctctggaggtcgtttgtctccagctgcttctccc
agtgaattctagctaacttaacatttcagaactatgaaaactgtatgact
acttaactcagggtctatgctccctgcattgctgctgagaaagtagctgc
aaatggcagtaggaagagctgctgtgcttgccttctcattctccttccgt
gcacaacaggtctgatgcctttgtctaataatcaaaacccccttttcata
tatttgtctcagcatctatatatttttcttttcaaaactaaaaatagatt
tttttcatacaataacttgtcacagttccctctctcaaccatttcttcca
gatactcaccactgtacaccaaatctattaccttttcttctctcttatta
caaaacgagtacagctagacaggagcataaaatagactcataggactgtg
ataaggatgctgaatctactctccacaattaaagctctggagggtttagg
tgcaggactcagtctgcttcatgggatagaaccggattttgacatgctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_22832523_22833576
seq2: B6Ng01-045P03.b_45_1077

seq1  GAATTCTTACACACAATTCATCAAATTGTTTTCCGTACATTTTGAGGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTACACACAATTCATCAAATTGTTTTCCGTACATTTTGAGGCTT  50

seq1  TGTGAAAATGTCCCAGGTATTAATGCTGAAATATCTGGATACCATAGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAAATGTCCCAGGTATTAATGCTGAAATATCTGGATACCATAGCAA  100

seq1  ATTTCATAGCCCATTAGTCAGGGGGCATTGGCTTGTTTTTCTAAGGCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATAGCCCATTAGTCAGGGGGCATTGGCTTGTTTTTCTAAGGCCTT  150

seq1  TTTTTTTTCTATTCATCTATTCATTTCTTAAGGTCACATATCCTTGAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTCTATTCATCTATTCATTTCTTAAGGTCACATATCCTTGAGAA  200

seq1  AGCCTTAAGGTCATTCTTAGAAAAATCTAAGAATAAGGTGTTGACACAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTAAGGTCATTCTTAGAAAAATCTAAGAATAAGGTGTTGACACAAT  250

seq1  TCTTGGAGAAATGAGCATGACTCCACATCATCTACACAATTTCCAGGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGAGAAATGAGCATGACTCCACATCATCTACACAATTTCCAGGTTT  300

seq1  TCCTGCCCCAGAGTCCCTGCCGTTTGATTGATTATGCCACAGTTATAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCCCCAGAGTCCCTGCCGTTTGATTGATTATGCCACAGTTATAGAT  350

seq1  ATCATGACTCAGGAAGATCCGTGTCCAAGCCACTTCATCTGTCCGGTACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGACTCAGGAAGATCCGTGTCCAAGCCACTTCATCTGTCCGGTACT  400

seq1  TCCTGCATTATCATGTCCTTCCTAAGCTTTCTACACATCGACCCCAATTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCATTATCATGTCCTTCCTAAGCTTTCTACACATCGACCCCAATTG  450

seq1  TTAACCTTTATAGACACACAGTCAAATCTAACTTATTTTGAGCCAAACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCTTTATAGACACACAGTCAAATCTAACTTATTTTGAGCCAAACAT  500

seq1  TTCAAACAGTTGCAATGGACAACTTTGTCCCAGGCTTGCCTCTTGAGTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAACAGTTGCAATGGACAACTTTGTCCCAGGCTTGCCTCTTGAGTTC  550

seq1  TTGGCAGCCTTCCCTTTTGTGTAGACCAAATTTGAGGGACTACCAAGCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCAGCCTTCCCTTTTGTGTAGACCAAATTTGAGGGACTACCAAGCTG  600

seq1  AACCCAGAAGACTACATGTCTGTCAGACTTTACATTATATTGTGACACTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAGAAGACTACATGTCTGTCAGACTTTACATTATATTGTGACACTG  650

seq1  AGAAGTAAAGAGTGCTCATGTCTGCCCCAGTTAGGCCAGGAAGTCAAGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTAAAGAGTGCTCATGTCTGCCCCAGTTAGGCCAGGAAGTCAAGGG  700

seq1  CAGCCCCCAAAGAGGACTTTCTGTTATTGGTGAAGCTTCTGATCATGTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCCCAAAGAGGACTTTCTGTTATTGGTGAAGCTTCTGATCATGTGA  750

seq1  CCAGGAAGGGACCACAGGCCAGATTTGACAGATAAATTTACTTTCATGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAAGGGACCACAGGCCAGATTTGACAGATAAATTTACTTTCATGTC  800

seq1  CTAAATACGGGGCTCCTCTTTCACTCCAGCAACCTTTTTATGTATCTGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATACGGGGCTCCTCTTTCACTCCAGCAACCTTTTTATGTATCTGCT  850

seq1  CTCTGGATAACATCTCTTTTTATGCCTAAGTGTTACCCACACATTAGTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGATAACATCTCTTTTTATGCCTAAGTGTTACCCACACATTAGTTA  900

seq1  ACTGTGTCTTTATTGATTAACGTAAATCAGAAATAAAACTATGAAATGAT  950
      |||||||||||| ||||| |||| |||||||||| |||||||||||||||
seq2  ACTGTGTCTTTA-TGATT-ACGT-AATCAGAAAT-AAACTATGAAATGAT  946

seq1  AAAAAGTAAAGGTTAATCTTATGCACCAGCCATCGCTTCCCACATTTATA  1000
        |||||||||    ||| |||||| ||| |||||||   ||||||||||
seq2  --AAAGTAAAG---TATC-TATGCA-CAG-CATCGCT---CACATTTATA  985

seq1  TGCACCCACCCACGCAGTCACGCATGCGTACCCATGCAGGCACACATAGC  1050
      |||||    |||||||||||||||||||||  ||||||| || || ||||
seq2  TGCAC---ACCACGCAGTCACGCATGCGTA--CATGCAGCCA-ACGTAGC  1029

seq1  ACAC  1054
      ||||
seq2  ACAC  1033

seq1: chr10_22974046_22975111
seq2: B6Ng01-045P03.g_64_1112 (reverse)

seq1  GAGCATGGTCAAAATCCCGGGGTCCAATCCCATGAAGCAGACTGAGTCCT  50
      |||||| ||||||||||   ||| | ||||||||||||||||||||||||
seq2  GAGCAT-GTCAAAATCC---GGTTCTATCCCATGAAGCAGACTGAGTCCT  46

seq1  GCACCTAAACCCCTTCCAGAAGCCTTTAATTGTGGAGAGTTAGATTTCAG  100
      ||||||||||||  ||||||   |||||||||||||||| |||| |||||
seq2  GCACCTAAACCC--TCCAGA--GCTTTAATTGTGGAGAG-TAGA-TTCAG  90

seq1  CATCCTTATCACAGTCTTATGAGTTCTATTTTATGGCTTCCTGTCTAGGC  150
      |||||||||||||||| |||||| |||||||||||   ||||||||| ||
seq2  CATCCTTATCACAGTCCTATGAG-TCTATTTTATG--CTCCTGTCTA-GC  136

seq1  TGTTACTTCGTTTTGTAATAAGAGAGAAGGAAAGGTAATAGAATTTGGTG  200
      || ||| |||||||||||||||||||||| ||||||||||| ||||||||
seq2  TG-TAC-TCGTTTTGTAATAAGAGAGAAGAAAAGGTAATAG-ATTTGGTG  183

seq1  TACAGT-GTGAGTATCTGGAAGAAATGGTTGAGAGAGGGAACTGTGACAA  249
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTGGTGAGTATCTGGAAGAAATGGTTGAGAGAGGGAACTGTGACAA  233

seq1  GTTATTGTATGAAAAAAATCTATTTTTAGTTTTTGAAAAGAAAAATATAT  299
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GTTATTGTATGAAAAAAATCTATTTTTAG-TTTTGAAAAGAAAAATATAT  282

seq1  AGATGCTGAGACAAATATATGAAAAGGGGGTTTTGATTATTAGACAAAGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTGAGACAAATATATGAAAAGGGGGTTTTGATTATTAGACAAAGG  332

seq1  CATCAGACCTGTTGTGCACGGAAGGAGAATGAGAAGGCAAGCACAGCAGC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGACCTGTTGTGCACGGAAGGAGAATGAGAAGGCAAGCACAGCAGC  382

seq1  TCTTCCTACTGCCATTTGCAGCTACTTTCTCAGCAGCAATGCAGGGAGCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTACTGCCATTTGCAGCTACTTTCTCAGCAGCAATGCAGGGAGCA  432

seq1  TAGACCCTGAGTTAAGTAGTCATACAGTTTTCATAGTTCTGAAATGTTAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACCCTGAGTTAAGTAGTCATACAGTTTTCATAGTTCTGAAATGTTAA  482

seq1  GTTAGCTAGAATTCACTGGGAGAAGCAGCTGGAGACAAACGACCTCCAGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGCTAGAATTCACTGGGAGAAGCAGCTGGAGACAAACGACCTCCAGA  532

seq1  GATTTGTACAGGGTGTCAATCACATAGCTGCCCAAAACTAAGCTATGCAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGTACAGGGTGTCAATCACATAGCTGCCCAAAACTAAGCTATGCAG  582

seq1  ACATAGACACCAGCATGTGGTTGGAGATAATGATTAACAATAGAGTCCTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGACACCAGCATGTGGTTGGAGATAATGATTAACAATAGAGTCCTT  632

seq1  GCCTTGGACGCACAAAGACCTGGTATTGAATGCTAGCCCTGTGTAAAAAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGGACGCACAAAGACCTGGTATTGAATGCTAGCCCTGTGTAAAAAC  682

seq1  CCATACTTCTAAAACTCAAACGAATTTAGTAATCACTTAATGACATTTTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATACTTCTAAAACTCAAACGAATTTAGTAATCACTTAATGACATTTTA  732

seq1  AGACAAGAGTTCCAAATCCAAGAATGGAGATGATAAAATCTAGATTATAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAGAGTTCCAAATCCAAGAATGGAGATGATAAAATCTAGATTATAA  782

seq1  GTAATTATATTCATTATCCCATGAAATGATTCTAGTCATGCAAAAAAAAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTATATTCATTATCCCATGAAATGATTCTAGTCATGCAAAAAAAAA  832

seq1  AAAAACCAAAAGTGTAACCAGATAAAATATTAGTCATTAGCCACAAAACC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACCAAAAGTGTAACCAGATAAAATATTAGTCATTAGCCACAAAACC  882

seq1  AGAAATAATGGATATAATATAATTTGAAGAAATTTATATTGAAACAATTA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATAATGGATATAATATAATTTGAAGAAATTTATATTGAAACAATTA  932

seq1  TCATAGATAGATTCAAACTTAAGTGAACCCGCGGGCACAATTAAAAAGAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGATAGATTCAAACTTAAGTGAACCCGCGGGCACAATTAAAAAGAA  982

seq1  ATGAAGCCGACACCTACAAAGAGGCACTTCTAAGGTAAGAGCATACAACA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGCCGACACCTACAAAGAGGCACTTCTAAGGTAAGAGCATACAACA  1032

seq1  TTTGTAAATAGGAATTC  1066
      |||||||||||||||||
seq2  TTTGTAAATAGGAATTC  1049