BAC Information

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BAC

Clone NameB6Ng01-045P05
Chromosome10 (Build37)
Map Location 123,409,541 - 123,487,567
singlet/doubletdoublet
Overlap genenone
Upstream geneD630033A02Rik, Mon2, Usp15, LOC100042958, AI851790
Downstream gene4930503E24Rik, LOC671416
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-045P05.bB6Ng01-045P05.g
ACCDH871254DH871255
length1,131821
definitionDH871254|Mus musculus domesticus DNA, BAC clone: B6Ng01-045P05, 5' end.DH871255|Mus musculus domesticus DNA, BAC clone: B6Ng01-045P05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(123,486,418 - 123,487,567)(123,409,541 - 123,410,362)
sequence
gaattcataaatagttaatctacttagaatatatacctgttgctgtgaca
cacagtgctccaagacttagccctaagtggaagaaaatataatcagacat
caatgttcctcctgtaaggttaaatggacagttagaatataagaaccaga
gggcaaaggggtggcctgttgtgtagctatgtcctctaaatcgaagtatt
cccttctggaaggtgtggcagtgcgtggtaatacaggaagttagaagaac
tcaggagaaatctacaggattagtgtggctatttactgagggtacagaac
agtaagttactgctggtcaggagctgcctacggttgtgcaggaggcccca
gaaagacaaccttcatgactcatcactgctagtagggtttgatatccaca
gaggcagctcctttgcatcgctcatgtttctacacagaaacttcagtcag
gttatttaagcaactcttcattcatgttctgtaagtatataaacccattg
gtttaccaagctatctgtgaaggggttgtttctttggtctggtttagtgt
cttatgttgggctaaaagaaaaacaaattcttcatgtgtccccaagaaac
tcagacacaaaaggatcacaaccttattgtgttctattgaatttgttact
ttgcaatgtatgtttttaatgactagatataatattctaaatgtaaaaat
ttaaaagtctgcttcatataaaatacaggtgtcatgatgcccccaaaagc
tttcagagctataaatttagatacacttcaggctattgactaacatcatt
gaagataaaagtctataaatggcaaacttttaatttttacctgggagcat
ggattttaactgataatgttagcatcaaagagtaactataataattacca
tggcattagacacatggagagatggataataaatgtctttatgttgcacc
tttctagtcccatcttagactcactagactattcccagatactttccacc
acttcaaacttttccatgatcatttactgaactatagaagcttctcctta
agttaattcaattaaaatgcattcaattggatctagctgtaccaagggct
aaatcagctgaattctattaagaaaggagaa
gaattccatgcctaccatgaacatgactattgctaccaagttatggaacc
aaaatgtattcactttaagaaggaagagattctgtgttctatataagtgt
tcatcttaaaagttatataaacaatttgtcttatttggcctgcacagaaa
agataccaaacaaatcctagtatgggttcataggaccttgaagtgttccc
aactatcatctgagttgtaagatgaattcttagatttctcctaagtctct
ctgcagtagaccatgtcagtgattttcactcatttattcattctcctagc
aaaggttgagaaagctatcttagaaactatgagaagcaatcctcagaaaa
ggccaagattttcttcctaatgtgactcagatcttaactggggagagaag
taagagaaggaacattcataacaaaccataataaaaataccttcttcaag
attccatagagtcacaatcataaacacagctctttccttccgattaacct
ggcctcttatcacagcctctttgaaggccttgtaaggagtttgtcctcat
ttcttatggtgactttgtatatcttcctcttcttcttcttcttcttcttc
ttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttctt
cctcttcctcttcctctttctcttcctcctcccctcctcctctccttttc
ctcctcctttcttcttcttctccttctcctcctcctccttctttcttcct
tcccacctcatcctctgcatatcaccccctactctttgtcctcttcttct
ctcactgtctccttcttctgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_123486418_123487567
seq2: B6Ng01-045P05.b_45_1175 (reverse)

seq1  TTCTCCTTTCTTAATAGAAACTCAGCTGATTTTAGCCCTTGGTCACAGCT  50
      ||||||||||||||||| || |||||||| ||||||||||||| ||||||
seq2  TTCTCCTTTCTTAATAG-AATTCAGCTGA-TTTAGCCCTTGGT-ACAGCT  47

seq1  AGATTCCAATTTTGAATTGGCATTTTAAATTGAATTAACTTTAAGGAGAG  100
      ||| |||||  ||||||  ||||||| |||||||||||| ||||||||| 
seq2  AGA-TCCAA--TTGAAT--GCATTTT-AATTGAATTAAC-TTAAGGAGAA  90

seq1  CCTTCTATAGTTCAGTTAATGATTCATGGGAAAAGTTTGAAGTTGGTGGA  150
       ||||||||||||||| ||||| |||| |||||||||||||| |||||||
seq2  GCTTCTATAGTTCAGTAAATGA-TCAT-GGAAAAGTTTGAAG-TGGTGGA  137

seq1  AAGTATCTTGGGAATAGTCTAGTTGAGTCTAAGATGGGACTAGAAAGGTG  200
      ||||||| |||||||||||||| |||||||||||||||||||||||||||
seq2  AAGTATC-TGGGAATAGTCTAG-TGAGTCTAAGATGGGACTAGAAAGGTG  185

seq1  CAACATAAAGACATTTTATTTATCCATTCTCTCCATGTGTCTAATGCCAT  250
      ||||||||||||||||   ||||||| |||||||||||||||||||||||
seq2  CAACATAAAGACATTT--ATTATCCA-TCTCTCCATGTGTCTAATGCCAT  232

seq1  GGTAATTATTATAGTTTACTCTTTGATGCTAACATTATCAGTTAAAATCC  300
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GGTAATTATTATAG-TTACTCTTTGATGCTAACATTATCAGTTAAAATCC  281

seq1  ATGCTCCCAGGTAAAAATTTAAAGTTTGCCATTTATAGACTTTTATCTTC  350
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ATGCTCCCAGGTAAAAATTAAAAGTTTGCCATTTATAGACTTTTATCTTC  331

seq1  AATGATGTTAGTCAATAGCCTGAAGTGTATCTAAATTTATAGCTCTGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATGTTAGTCAATAGCCTGAAGTGTATCTAAATTTATAGCTCTGAAA  381

seq1  GCTTTTGGGGGCATCATGACACCTGTATTTTATATGAAGCAGACTTTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTGGGGGCATCATGACACCTGTATTTTATATGAAGCAGACTTTTAA  431

seq1  ATTTTTACATTTAGAATATTATATCTAGTCATTAAAAACATACATTGCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTACATTTAGAATATTATATCTAGTCATTAAAAACATACATTGCAA  481

seq1  AGTAACAAATTCAATAGAACACAATAAGGTTGTGATCCTTTTGTGTCTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAACAAATTCAATAGAACACAATAAGGTTGTGATCCTTTTGTGTCTGA  531

seq1  GTTTCTTGGGGACACATGAAGAATTTGTTTTTCTTTTAGCCCAACATAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTTGGGGACACATGAAGAATTTGTTTTTCTTTTAGCCCAACATAAG  581

seq1  ACACTAAACCAGACCAAAGAAACAACCCCTTCACAGATAGCTTGGTAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTAAACCAGACCAAAGAAACAACCCCTTCACAGATAGCTTGGTAAAC  631

seq1  CAATGGGTTTATATACTTACAGAACATGAATGAAGAGTTGCTTAAATAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGGTTTATATACTTACAGAACATGAATGAAGAGTTGCTTAAATAAC  681

seq1  CTGACTGAAGTTTCTGTGTAGAAACATGAGCGATGCAAAGGAGCTGCCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTGAAGTTTCTGTGTAGAAACATGAGCGATGCAAAGGAGCTGCCTC  731

seq1  TGTGGATATCAAACCCTACTAGCAGTGATGAGTCATGAAGGTTGTCTTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGATATCAAACCCTACTAGCAGTGATGAGTCATGAAGGTTGTCTTTC  781

seq1  TGGGGCCTCCTGCACAACCGTAGGCAGCTCCTGACCAGCAGTAACTTACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCCTCCTGCACAACCGTAGGCAGCTCCTGACCAGCAGTAACTTACT  831

seq1  GTTCTGTACCCTCAGTAAATAGCCACACTAATCCTGTAGATTTCTCCTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGTACCCTCAGTAAATAGCCACACTAATCCTGTAGATTTCTCCTGA  881

seq1  GTTCTTCTAACTTCCTGTATTACCACGCACTGCCACACCTTCCAGAAGGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTCTAACTTCCTGTATTACCACGCACTGCCACACCTTCCAGAAGGG  931

seq1  AATACTTCGATTTAGAGGACATAGCTACACAACAGGCCACCCCTTTGCCC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTTCGATTTAGAGGACATAGCTACACAACAGGCCACCCCTTTGCCC  981

seq1  TCTGGTTCTTATATTCTAACTGTCCATTTAACCTTACAGGAGGAACATTG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTTCTTATATTCTAACTGTCCATTTAACCTTACAGGAGGAACATTG  1031

seq1  ATGTCTGATTATATTTTCTTCCACTTAGGGCTAAGTCTTGGAGCACTGTG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTGATTATATTTTCTTCCACTTAGGGCTAAGTCTTGGAGCACTGTG  1081

seq1  TGTCACAGCAACAGGTATATATTCTAAGTAGATTAACTATTTATGAATTC  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACAGCAACAGGTATATATTCTAAGTAGATTAACTATTTATGAATTC  1131

seq1: chr10_123409541_123410362
seq2: B6Ng01-045P05.g_69_888

seq1  GAATTCCATGCCTACCATGAACATGACTATTGCTACCAAGTTATGGAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGCCTACCATGAACATGACTATTGCTACCAAGTTATGGAACC  50

seq1  AAAATGTATTCACTTTAAGAAGGAAGAGATTCTGTGTTCTATATAAGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTATTCACTTTAAGAAGGAAGAGATTCTGTGTTCTATATAAGTGT  100

seq1  TCATCTTAAAAGTTATATAAACAATTTGTCTTATTTGGCCTGCACAGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTTAAAAGTTATATAAACAATTTGTCTTATTTGGCCTGCACAGAAA  150

seq1  AGATACCAAACAAATCCTAGTATGGGTTCATAGGACCTTGAAGTGTTCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACCAAACAAATCCTAGTATGGGTTCATAGGACCTTGAAGTGTTCCC  200

seq1  AACTATCATCTGAGTTGTAAGATGAATTCTTAGATTTCTCCTAAGTCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATCATCTGAGTTGTAAGATGAATTCTTAGATTTCTCCTAAGTCTCT  250

seq1  CTGCAGTAGACCATGTCAGTGATTTTCACTCATTTATTCATTCTCCTAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGTAGACCATGTCAGTGATTTTCACTCATTTATTCATTCTCCTAGC  300

seq1  AAAGGTTGAGAAAGCTATCTTAGAAACTATGAGAAGCAATCCTCAGAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTTGAGAAAGCTATCTTAGAAACTATGAGAAGCAATCCTCAGAAAA  350

seq1  GGCCAAGATTTTCTTCCTAATGTGACTCAGATCTTAACTGGGGAGAGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAAGATTTTCTTCCTAATGTGACTCAGATCTTAACTGGGGAGAGAAG  400

seq1  TAAGAGAAGGAACATTCATAACAAACCATAATAAAAATACCTTCTTCAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGAAGGAACATTCATAACAAACCATAATAAAAATACCTTCTTCAAG  450

seq1  ATTCCATAGAGTCACAATCATAAACACAGCTCTTTCCTTCCGATTAACCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCATAGAGTCACAATCATAAACACAGCTCTTTCCTTCCGATTAACCT  500

seq1  GGCCTCTTATCACAGCCTCTTTGAAGGCCTTGTAAGGAGTTTGTCCTCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCTTATCACAGCCTCTTTGAAGGCCTTGTAAGGAGTTTGTCCTCAT  550

seq1  TTCTTATGGTGACTTTGTATATCTTCCTCTTCTTCTTCTTCTTCTTCTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTATGGTGACTTTGTATATCTTCCTCTTCTTCTTCTTCTTCTTCTTC  600

seq1  TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT  650

seq1  CCTCTTCCTCTTCCTCTTTCTCTTCCTCCTCCCCTCCTCCTCTCCTTTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTCCTCTTCCTCTTTCTCTTCCTCCTCCCCTCCTCCTCTCCTTTTC  700

seq1  CTCCTCC-TTCTTCTTCTTCTCCTTCTCCTCCTCCTCCTTCTTTCTTCCT  749
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCTTTCTTCTTCTTCTCCTTCTCCTCCTCCTCCTTCTTTCTTCCT  750

seq1  TCTCCTCCTCATCCTCTTCATATTCACCCCCTACTCTTTTTCCTCTTTCC  799
      || || ||||||||||| |||| |||||||||||||||| ||||| ||| 
seq2  TC-CCACCTCATCCTCTGCATA-TCACCCCCTACTCTTTGTCCTC-TTCT  797

seq1  TCTCTCACTGTCTCCTTCTTCTG  822
      |||||||||||||||||||||||
seq2  TCTCTCACTGTCTCCTTCTTCTG  820