BAC Information

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BAC

Clone NameB6Ng01-046P15
Chromosome10 (Build37)12 (Build37)
Map Location 104,053,903 - 104,054,36314,384,944 - 14,386,058
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-046P15.bB6Ng01-046P15.g
ACCDH871969DH871970
length9961,112
definitionDH871969|Mus musculus domesticus DNA, BAC clone: B6Ng01-046P15, 5' end.DH871970|Mus musculus domesticus DNA, BAC clone: B6Ng01-046P15, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,053,903 - 104,054,363)(14,384,944 - 14,386,058)
sequence
gaattctcacctgaggaataccaaatggcagagaagcacctgaaaaaatg
ttcaacatccttaattatcaggtaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatgtctaagatccaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatctgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctcggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtaaagactgccttatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatatagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggatgagctagagaagtagccagagctaaagggatctgcaccct
gaattctttctgtctggatcctagtcttgaactgttttaaatgttggtta
tcagaacttcctttcagttgcttggacctcaggcagtttccctatgttat
tattttattttttatgttataacttgatgacatacaacccaggtgtatgg
tatcttctgtatagtcttctctaattctgtagggctatcgagaggattgg
taaagccttacactatttccagagactctgcgatctccataacaatcaac
cacatagaaggtattctacttcagatactatgttttgttttaataatgtg
gtgcttctagaatcaggtttattaaggaccttttaaaggaaaaatattta
atttgtcttctttacagtttctcctattattagtcaaaatttcttgtttc
catttgaatcaaagttgcttgttttaaattgaaaacatccatttttttcc
attgagataataaaatatttccctcacaattcttagaaattaatatcatc
cccacagacatacatatgtaagatttcatttcaaagtgaggacaagtttt
gttttgttctttcagctctgccattattcttttatgctttaatagttgct
ttcatcatttccatagtctacttcagctgttaacatgacacaaacctaga
gtcatttgggaggaaggacctttaactgaagaagtgctcagattattctg
gactatggacattttaactgctatgtgatgaaatagaatccagtccactg
tgggtagtgccatccctaggctatatgagaaaaacagttaatcaagacag
agggagcaagctattcggctgccttttcccatggtttctgatccatgttc
ctgcctttatgttcctaggtgactatgaaaataaacttcttcttctctga
gttgtttttggccatattatttatcacagcaacagaaaaatactaagacc
atacacatttaaattattctattttcctctatcattcttcttctttcagt
gtcccaatatataaataatgactttgccatgcagtcacatgtctagtctt
ttcttaagaacttgtgctttgaagaaattaattcctgacaaggttttgga
acactagtatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053903_104054363
seq2: B6Ng01-046P15.b_45_515 (reverse)

seq1  TTTAATAG----------CTCCATTGTGTAAATGTACCACATTTTCTGTA  40
      ||||||||          |||||||||||| |||||||||||||||||||
seq2  TTTAATAGCTGAGTAGTACTCCATTGTGTAGATGTACCACATTTTCTGTA  50

seq1  TCTATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTCCTGGCTATT  90
      || ||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCTATT  100

seq1  ATAAATAAGGCTGCTATGAATATAGTGGAGCATGTGTCCTTCTTACCGGT  140
      |||||||||||||||||||| |||||||||||||||||||||||||| ||
seq2  ATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTCCTTCTTACCAGT  150

seq1  TGGGGCATCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATCCTCCG  190
      |||||||||||||||||||||||| || ||||||||||||||||||||||
seq2  TGGGGCATCTTCTGGATATATGCCGAGGAGAGGTATTGCTGGATCCTCCG  200

seq1  GTAGTACTATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCCAGAGT  240
      |||||||||||||||||||||||| |||||||||||| ||||||||||||
seq2  GTAGTACTATGTCCAATTTTCTGAGGAACCGCCAGACAGATTTCCAGAGT  250

seq1  GGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTC  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTC  300

seq1  TCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  340
      |||||||||||||||||||||||||||||||||||||| |||||||| ||
seq2  TCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTGGATCTTAGACA  350

seq1  TTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCC  390
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTAC  400

seq1  CTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCG  440
      ||||| |||||||||||||||||||||||||||||||||||||||||| |
seq2  CTGATAATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTTG  450

seq1  GTATTCCTCAGGTGAGAATTC  461
      |||||||||||||||||||||
seq2  GTATTCCTCAGGTGAGAATTC  471

seq1: chr12_14384944_14386058
seq2: B6Ng01-046P15.g_67_1178

seq1  GAATTCTTTCTGTCTGGATCCTAGTCTTGAACTGTTTTAAATGTTGGTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTGTCTGGATCCTAGTCTTGAACTGTTTTAAATGTTGGTTA  50

seq1  TCAGAACTTCCTTTCAGTTGCTTGGACCTCAGGCAGTTTCCCTATGTTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAACTTCCTTTCAGTTGCTTGGACCTCAGGCAGTTTCCCTATGTTAT  100

seq1  TATTTTATTTTTTATGTTATAACTTGATGACATACAACCCAGGTGTATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTATTTTTTATGTTATAACTTGATGACATACAACCCAGGTGTATGG  150

seq1  TATCTTCTGTATAGTCTTCTCTAATTCTGTAGGGCTATCGAGAGGATTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTCTGTATAGTCTTCTCTAATTCTGTAGGGCTATCGAGAGGATTGG  200

seq1  TAAAGCCTTACACTATTTCCAGAGACTCTGCGATCTCCATAACAATCAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCCTTACACTATTTCCAGAGACTCTGCGATCTCCATAACAATCAAC  250

seq1  CACATAGAAGGTATTCTACTTCAGATACTATGTTTTGTTTTAATAATGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAGAAGGTATTCTACTTCAGATACTATGTTTTGTTTTAATAATGTG  300

seq1  GTGCTTCTAGAATCAGGTTTATTAAGGACCTTTTAAAGGAAAAATATTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTCTAGAATCAGGTTTATTAAGGACCTTTTAAAGGAAAAATATTTA  350

seq1  ATTTGTCTTCTTTACAGTTTCTCCTATTATTAGTCAAAATTTCTTGTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTCTTCTTTACAGTTTCTCCTATTATTAGTCAAAATTTCTTGTTTC  400

seq1  CATTTGAATCAAAGTTGCTTGTTTTAAATTGAAAACATCCATTTTTTTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGAATCAAAGTTGCTTGTTTTAAATTGAAAACATCCATTTTTTTCC  450

seq1  ATTGAGATAATAAAATATTTCCCTCACAATTCTTAGAAATTAATATCATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGATAATAAAATATTTCCCTCACAATTCTTAGAAATTAATATCATC  500

seq1  CCCACAGACATACATATGTAAGATTTCATTTCAAAGTGAGGACAAGTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAGACATACATATGTAAGATTTCATTTCAAAGTGAGGACAAGTTTT  550

seq1  GTTTTGTTCTTTCAGCTCTGCCATTATTCTTTTATGCTTTAATAGTTGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTTCTTTCAGCTCTGCCATTATTCTTTTATGCTTTAATAGTTGCT  600

seq1  TTCATCATTTCCATAGTCTACTTCAGCTGTTAACATGACACAAACCTAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCATTTCCATAGTCTACTTCAGCTGTTAACATGACACAAACCTAGA  650

seq1  GTCATTTGGGAGGAAGGACCTTTAACTGAAGAAGTGCTCAGATTATTCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTTGGGAGGAAGGACCTTTAACTGAAGAAGTGCTCAGATTATTCTG  700

seq1  GACTATGGACATTTTAACTGCTATGTGATGAAATAGAATCCAGTCCACTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTATGGACATTTTAACTGCTATGTGATGAAATAGAATCCAGTCCACTG  750

seq1  TGGGTAGTGCCATCCCTAGGCTATATGAGAAAAACAGTTAATCAAGACAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTAGTGCCATCCCTAGGCTATATGAGAAAAACAGTTAATCAAGACAG  800

seq1  AGGGAGCAAGCTATTCGGCTGCCTTTTCCCATGGTTTCTGATCCATGTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGCAAGCTATTCGGCTGCCTTTTCCCATGGTTTCTGATCCATGTTC  850

seq1  CTGCCTTTATGTTCCTAGGTGACTATG-AAATAAACTTCTTCTTCTCTGA  899
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CTGCCTTTATGTTCCTAGGTGACTATGAAAATAAACTTCTTCTTCTCTGA  900

seq1  GTTGTTTTTGGCCATATTATTTATCACAGCAACAGAAAAATACTAAGACC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTTTTGGCCATATTATTTATCACAGCAACAGAAAAATACTAAGACC  950

seq1  ATACACATTTAATTTATTCTATTTT-CTCTATCCATTC-TCTTCTTTCAG  997
      |||||||||||| |||||||||||| |||||| ||||| |||||||||||
seq2  ATACACATTTAAATTATTCTATTTTCCTCTAT-CATTCTTCTTCTTTCAG  999

seq1  TGTCCCAATATATAAATAATGACTTTGCCATGCCAGTCAACAATGTCTAG  1047
      |||||||||||||||||||||||||||||||| ||||||   ||||||||
seq2  TGTCCCAATATATAAATAATGACTTTGCCATG-CAGTCA--CATGTCTAG  1046

seq1  TCTTTTCTTACAGACTTGTGGTTTGGATGAAATT-ATCCCTGACAAGGGT  1096
      ||||||||||   ||||||| ||| || |||||| || |||||||| |||
seq2  TCTTTTCTTAAGAACTTGTGCTTT-GAAGAAATTAATTCCTGACAA-GGT  1094

seq1  TTTTGAACACTAGGTATCT  1115
      ||| |||||||| ||||||
seq2  TTTGGAACACTA-GTATCT  1112