BAC Information

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BAC

Clone NameB6Ng01-047B12
Chromosome10 (Build37)
Map Location 128,314,582 - 128,420,551
singlet/doubletdoublet
Overlap gene1110005A23Rik, Gdf11, Cd63, Rdh5, Bloc1s1, Itga7, Mettl7b
Upstream geneRdh7, Sdro, LOC382468, Hsd17b6, LOC100043618, Prim1, LOC100043077, Naca, Ptges3, Atp5b, Baz2a, LOC100043085, Rbms2, LOC100043624, Gls2, Spryd4, Mip, Timeless, Apon, Apof, Stat2, Il23a, Usp52, Tmem4, Cs, Coq10a, Ankrd52, Slc39a5, Obfc2b, Rnf41, Smarcc2, Myl6, Myl6b, Mbc2, Zc3h10, Rpl41, LOC668453, Pa2g4, Erbb3, LOC100043114, LOC668459, Rps26, Ikzf4, Suox, EG622589, Rab5b, Cdk2, Si, Dgka, LOC100043669, Wibg, LOC622655, Mmp19, 1110012D08Rik, Dnajc14, Ormdl2
Downstream geneOlfr9, Olfr763, EG622733, EG546487, Olfr765, Olfr768, Olfr769, Olfr770, Olfr771, Olfr772, Olfr773-ps1, LOC624925, Olfr774, Olfr1518, Olfr776, Olfr777, Olfr778-ps1, LOC544749, Olfr780, Olfr781, Olfr782, Olfr783-ps1, Olfr784, EG546488, Olfr786, Olfr787, Olfr788, Olfr789-ps1, Olfr790, Olfr791, Olfr792, GA_x5J8B7W6HFP-3168293-3169194, Olfr794, GA_x5J8B7W6HFP-3198834-3199739, Olfr796, GA_x5J8B7W6HFP-3231749-3230798, Olfr798, Olfr799, Olfr800, Smt3h2-ps3, Olfr801, Olfr802, Olfr803, Olfr804, Olfr805, Olfr806, Olfr807, Olfr808, Olfr809, Olfr810, Olfr811, Olfr812, Olfr813, Olfr814, Olfr815, Olfr816, Olfr1544-ps1, Olfr817-ps1, Olfr818, LOC100043200, Olfr247, LOC100043203
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-047B12.bB6Ng01-047B12.g
ACCDH872050DH872051
length1,069782
definitionDH872050|Mus musculus domesticus DNA, BAC clone: B6Ng01-047B12, 5' end.DH872051|Mus musculus domesticus DNA, BAC clone: B6Ng01-047B12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,419,457 - 128,420,551)(128,314,582 - 128,315,364)
sequence
gaattcactgcagctggagttgtgggaggctgtaaacctctatgtgggtg
ctgggaaccaaactcagtcgtcttcctgatcctcatctggtgttcactgc
ggcctggtaagatatccacaggcaaaacccagagtgtccagtgcttgtgt
tatctagctttatgatgtttaacatttctgtaacttccaattaaaattag
ccataaataaaaaacaagggttagatcctgaaaacttagtcaaaaagggg
aagtatagccaagtgtggtggtgcatgcctttaatcccatcactctggag
aagagaccgatctctgaggtcctaggccagcctagcctgatctacataga
aagttccaggatagacaaggattacataataagaccctgtctcaaaaaaa
aaaaaaaaaaaaacagtgatgatttgttctggtttactttgttacaaggc
tggaggtccctggtgcagcacatttgaaagtccaagcaaatgaaaccaca
tcactcccatggagtgaacctcccagtaccttctcactcttcttctccct
gagctgtgtacgacgaaaagatgacagagtaaggggctacaaacattcct
gcccaatgacttccagctcctcagtgggaactggagttaaaaaaaacaaa
aacaaaaacaaaaacaaaaaaaactcatttcaccctccagttattatgcg
atgaactaacaccaatacccctatcaagtgtaaggcatgggcgcagctaa
gttgcctcacaaagtctagtacggtataaatactcccactgtgaagataa
gaaatcagagtgatgaagatgaaggtctgtgtctgaggtcacacagagtc
gtacatatgcagaatcaaagagcaaacttcatccacctgtcctcaaagca
gtgtaagtgaaatttgtaaacccagctcaaatctgtgtagctacagctct
gtagtgagtctgcactagaacaagagtaaatgctagcagacatctcctct
actgcatcatctaagaagaggaccgaaacatgacagtcatgttatcctca
gtgtaggctagagctggag
gaattcagtagcagttttatttaactgctcttctgcgtttaagattgttg
tggtttttgtttttaattatttttgcttattaataaaaaaggaagaaaag
aaaatgtgttttattaggtgttccttttaagtttctagagactgattaga
ccacatagagggagtgtcaatggcaaatattaaggggactaactgtaatg
cctatatcatgtagaaaaagaagataaagaagaggattgcgcctttaatc
ccagcactcgggaggcagaggcaggcggatttctgagttcgaggccagcc
tggtctacaaagttagtgccaggacagccagggctacacagagaaaccct
gtcttgaaaaaccaaaaaaaaaaaaaaaaaaaaaaaagaagaggattggg
tctaccatctaagcctatttattatcttcttcatactcacagatatgctt
ttattttatccttcataaatgaggccaagtcaccccaagtctttgcttgg
gttgaaacagcccattctgaaggagaaaagccttggagattttaggaaat
gtaaaggataaaatgtggggctaatgactgactgccttctactttgaatg
aagcctaactatataaagcagaacatggccctatctttttgtagcagaag
tcactgtgtgggacctagctcaagaaggtaaatggggctggccactcctc
aggtcgaaggatagaaatccaaggcatggctgggtatcaagatgttaagg
cttgttgggacagagtggaacaaaagctgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_128419457_128420551
seq2: B6Ng01-047B12.b_46_1114 (reverse)

seq1  CTCCAGCTCTAGCCCTCACACTGAGGATAAACATGACCCTTGTCCATGTG  50
      ||||||||||||||   ||||||||||| ||||||||   ||| ||||| 
seq2  CTCCAGCTCTAGCC--TACACTGAGGAT-AACATGAC---TGT-CATGTT  43

seq1  TCTGTCCTCTTCTTTAAGATGATGCAGTTAGAGGAGATGTCTGCTAGGCA  100
      || |||||||||||  ||||||||||| |||||||||||||||||| |||
seq2  TCGGTCCTCTTCTT--AGATGATGCAG-TAGAGGAGATGTCTGCTA-GCA  89

seq1  TTTTACTTCTGTGTTCTAGGTGCAGACTCACTACAGAGCCTGTAAGGCTA  150
       ||||| ||| ||||||| ||||||||||||||||||| |||||  ||||
seq2  -TTTAC-TCT-TGTTCTA-GTGCAGACTCACTACAGAG-CTGTA--GCTA  132

seq1  AACACCAGATTTGGAGGCTGGGTTTACAAATTTCACTTACACTGGCTTTG  200
       |   ||||||||   ||||||||||||||||||||||||||| ||||||
seq2  CA---CAGATTTG--AGCTGGGTTTACAAATTTCACTTACACT-GCTTTG  176

seq1  GGGACAGGTGGATGGAGTTTGCTCTTTGATTCTGCATATGTTACGACTCT  250
       ||||||||||||| ||||||||||||||||||||||||| |||||||||
seq2  AGGACAGGTGGATGAAGTTTGCTCTTTGATTCTGCATATG-TACGACTCT  225

seq1  GTGTGACCTCAGACACAGACCTTCATCTTCATCACTCTGATTTCTTATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGACCTCAGACACAGACCTTCATCTTCATCACTCTGATTTCTTATCT  275

seq1  TCACAGTGGGAGTATTTATACCGTACTAGACTTTTGTGAGGCAACTTAGC  350
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TCACAGTGGGAGTATTTATACCGTACTAGAC-TTTGTGAGGCAACTTAGC  324

seq1  TGCGCCCATGCCTTACACTTGATAGGGGTATTGGTGTTAGTTCATCGCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGCCCATGCCTTACACTTGATAGGGGTATTGGTGTTAGTTCATCGCAT  374

seq1  AATAACTGGAGGGTGAAATGAGTTTTTTTTGTTTTTGTTTTTGTTTTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACTGGAGGGTGAAATGAGTTTTTTTTGTTTTTGTTTTTGTTTTTGT  424

seq1  TTTTTTTAACTCCAGTTCCCACTGAGGAGCTGGAAGTCATTGGGCAGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTAACTCCAGTTCCCACTGAGGAGCTGGAAGTCATTGGGCAGGAA  474

seq1  TGTTTGTAGCCCCTTACTCTGTCATCTTTTCGTCGTACACAGCTCAGGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTAGCCCCTTACTCTGTCATCTTTTCGTCGTACACAGCTCAGGGA  524

seq1  GAAGAAGAGTGAGAAGGTACTGGGAGGTTCACTCCATGGGAGTGATGTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGAGTGAGAAGGTACTGGGAGGTTCACTCCATGGGAGTGATGTGG  574

seq1  TTTCATTTGCTTGGACTTTCAAATGTGCTGCACCAGGGACCTCCAGCCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTTGCTTGGACTTTCAAATGTGCTGCACCAGGGACCTCCAGCCTT  624

seq1  GTAACAAAGTAAACCAGAACAAATCATCACTGTTTTTTTTTTTTTTTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACAAAGTAAACCAGAACAAATCATCACTGTTTTTTTTTTTTTTTTTT  674

seq1  TTGAGACAGGGTCTTATTATGTAATCCTTGTCTATCCTGGAACTTTCTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGACAGGGTCTTATTATGTAATCCTTGTCTATCCTGGAACTTTCTAT  724

seq1  GTAGATCAGGCTAGGCTGGCCTAGGACCTCAGAGATCGGTCTCTTCTCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATCAGGCTAGGCTGGCCTAGGACCTCAGAGATCGGTCTCTTCTCCA  774

seq1  GAGTGATGGGATTAAAGGCATGCACCACCACACTTGGCTATACTTCCCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGATGGGATTAAAGGCATGCACCACCACACTTGGCTATACTTCCCCT  824

seq1  TTTTGACTAAGTTTTCAGGATCTAACCCTTGTTTTTTATTTATGGCTAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGACTAAGTTTTCAGGATCTAACCCTTGTTTTTTATTTATGGCTAAT  874

seq1  TTTAATTGGAAGTTACAGAAATGTTAAACATCATAAAGCTAGATAACACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTGGAAGTTACAGAAATGTTAAACATCATAAAGCTAGATAACACA  924

seq1  AGCACTGGACACTCTGGGTTTTGCCTGTGGATATCTTACCAGGCCGCAGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTGGACACTCTGGGTTTTGCCTGTGGATATCTTACCAGGCCGCAGT  974

seq1  GAACACCAGATGAGGATCAGGAAGACGACTGAGTTTGGTTCCCAGCACCC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACCAGATGAGGATCAGGAAGACGACTGAGTTTGGTTCCCAGCACCC  1024

seq1  ACATAGAGGTTTACAGCCTCCCACAACTCCAGCTGCAGTGAATTC  1095
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGAGGTTTACAGCCTCCCACAACTCCAGCTGCAGTGAATTC  1069

seq1: chr10_128314582_128315364
seq2: B6Ng01-047B12.g_70_851

seq1  GAATTCAGTAGCAGTTTTATTTAACTGCTCTTCTGCGTTTAAGATTGTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTAGCAGTTTTATTTAACTGCTCTTCTGCGTTTAAGATTGTTG  50

seq1  TGGTTTTTGTTTTTAATTATTTTTGCTTATTAATAAAAAAGGAAGAAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTTGTTTTTAATTATTTTTGCTTATTAATAAAAAAGGAAGAAAAG  100

seq1  AAAATGTGTTTTATTAGGTGTTCCTTTTAAGTTTCTAGAGACTGATTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTGTTTTATTAGGTGTTCCTTTTAAGTTTCTAGAGACTGATTAGA  150

seq1  CCACATAGAGGGAGTGTCAATGGCAAATATTAAGGGGACTAACTGTAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATAGAGGGAGTGTCAATGGCAAATATTAAGGGGACTAACTGTAATG  200

seq1  CCTATATCATGTAGAAAAAGAAGATAAAGAAGAGGATTGCGCCTTTAATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATATCATGTAGAAAAAGAAGATAAAGAAGAGGATTGCGCCTTTAATC  250

seq1  CCAGCACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCC  300

seq1  TGGTCTACAAAGTTAGTGCCAGGACAGCCAGGGCTACACAGAGAAACCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTACAAAGTTAGTGCCAGGACAGCCAGGGCTACACAGAGAAACCCT  350

seq1  GTCTTGAAAAACCAAAAAAAAAAAAAAAAAAAAAAAAGAAGAGGATTGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGAAAAACCAAAAAAAAAAAAAAAAAAAAAAAAGAAGAGGATTGGG  400

seq1  TCTACCATCTAAGCCTATTTATTATCTTCTTCATACTCACAGATATGCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCATCTAAGCCTATTTATTATCTTCTTCATACTCACAGATATGCTT  450

seq1  TTATTTTATCCTTCATAAATGAGGCCAAGTCACCCCAAGTCTTTGCTTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTATCCTTCATAAATGAGGCCAAGTCACCCCAAGTCTTTGCTTGG  500

seq1  GTTGAAACAGCCCATTCTGAAGGAGAAAAGCCTTGGAGATTTTAGGAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAAACAGCCCATTCTGAAGGAGAAAAGCCTTGGAGATTTTAGGAAAT  550

seq1  GTAAAGGATAAAATGTGGGGCTAATGACTGACTGCCTTCTACTTTGAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGGATAAAATGTGGGGCTAATGACTGACTGCCTTCTACTTTGAATG  600

seq1  AAGCCTAACTATATAAAGCAGAACATGGCCCTATC-TTTTGTAGCAGAAG  649
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AAGCCTAACTATATAAAGCAGAACATGGCCCTATCTTTTTGTAGCAGAAG  650

seq1  TCACTGTGTGGGACCTAGCTCAAGAAGGTAAAT-GGGCTGGCCACTCCTC  698
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TCACTGTGTGGGACCTAGCTCAAGAAGGTAAATGGGGCTGGCCACTCCTC  700

seq1  AGGTCGAAGGATAGAAATCCAAGGCATGGCTGGGTATCAGAGATGTTAGG  748
      ||||||||||||||||||||||||||||||||||||||| |||||||| |
seq2  AGGTCGAAGGATAGAAATCCAAGGCATGGCTGGGTATCA-AGATGTTAAG  749

seq1  CATTGTTGGGACAGAAGTGGAACAAGATGCTGTGT  783
        |||||||||||| |||||||||| | |||||||
seq2  GCTTGTTGGGACAG-AGTGGAACAA-AAGCTGTGT  782