BAC Information

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BAC

Clone NameB6Ng01-047F08
Chromosome10 (Build37)
Map Location 104,053,903 - 104,054,363
singlet/doubletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-047F08.bB6Ng01-047F08.g
ACCDH872227DH872228
length1,159963
definitionDH872227|Mus musculus domesticus DNA, BAC clone: B6Ng01-047F08, 5' end.DH872228|Mus musculus domesticus DNA, BAC clone: B6Ng01-047F08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaaagactgagaaacacctgaaaaaatt
gttcaacatccttaatcatcagagaaatgcaaatcaaaacaaccctgaga
ttccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacag
cagatgctggcgaggatgtggagaaagaggaacactcctccattgttggt
gggattgcaagcttgtacaaccactttggaaatcagtctggcggttcctc
agaaaattggacatagtactaccagaggatccagcaatacctctcctggg
catatatccagaagatgccccaactggtaagaaggacacatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaagaacccaga
tgcccctcaacagaggaatggatacagaaaatgtggtacatctacacaat
ggagtactactcagctattaaaaagaatgaattcactaaattcctaggca
aatggtttgacctggagggcatcatcctgagtgaggtaacccaatcacaa
aagaactcaaatgaaatgtactcactgataagtggatattaacccagaaa
cttagtatagcgagatataaggtacaatatgtaaaacatatgaaactgaa
gaagaacgaagactacagtgtggacactttgctcattcttagaattggaa
acaatcacccatggaaggagttacagagacaaagtttggacctgagacaa
aaggatggtccatctagagactgacatatccagggatccatcccataatt
agcctccaagcgatgacaccattgcatacactagcaagccttagttgcaa
ggacggtgatatagctgtcccttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcaactattggatggatcacaggcccccaa
tggaggagctagagaaagtatcagagctaacagatctgcatcctatcaga
ggaacaacatatgactaccagtactccagagctcttgactctagctgcat
atgtatcaaagatgactagtcggcatcactggaaagaaagtccatggtca
ggcaactttaatgtccagtccggaaattcagccaaaatggaatgctggtt
tgtggaatg

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgccactcttagaagtgggaac
aaaacacccatagaaggagttacagagacaaagtttggagctgagacaaa
aggatggaccatgtagagactgccatatccagggatccaccccataatca
gcatccaaacgctgacaccatcgcatacactagcaagattttatttaaag
aacccagatttagctgtctcttgtgagactatgcccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccta
tggaggagctaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053903_104054363
seq2: B6Ng01-047F08.g_66_536 (reverse)

seq1  TTTAATAG----------CTCCATTGTGTAAATGTACCACATTTTCTGTA  40
      ||||||||          |||||||||||| |||||||||||||||||||
seq2  TTTAATAGCTGAGTAGTACTCCATTGTGTAGATGTACCACATTTTCTGTA  50

seq1  TCTATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTCCTGGCTATT  90
      || ||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCTATT  100

seq1  ATAAATAAGGCTGCTATGAATATAGTGGAGCATGTGTCCTTCTTACCGGT  140
      |||||||||||||||||||| |||||||||||||||||||||||||| ||
seq2  ATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTCCTTCTTACCAGT  150

seq1  TGGGGCATCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATCCTCCG  190
      |||||| |||||||||||||||||||| ||||||||||||||||||||||
seq2  TGGGGCTTCTTCTGGATATATGCCCAGGAGAGGTATTGCTGGATCCTCCG  200

seq1  GTAGTACTATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCCAGAGT  240
      |||||||||||||||||||||||| |||||||||||| ||||||||||||
seq2  GTAGTACTATGTCCAATTTTCTGAGGAACCGCCAGACTGATTTCCAGAGT  250

seq1  GGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTC  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTC  300

seq1  TCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  340
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TCCACATCCACGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  350

seq1  TTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCC  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCC  400

seq1  CTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCG  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCG  450

seq1  GTATTCCTCAGGTGAGAATTC  461
      |||||||||||||||||||||
seq2  GTATTCCTCAGGTGAGAATTC  471


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