BAC Information

Click to search

BAC

Clone NameB6Ng01-047K02
Chromosome10 (Build37)
Map Location 38,596,523 - 38,597,536
singlet/doubletsinglet
Overlap geneLOC100040915
Upstream genenone
Downstream geneLama4, 1700025K23Rik, Tube1, EG624165, LOC100040964, Fyn, LOC629337, Traf3ip2, LOC667964, EG667970, E130307A14Rik, Rev3l, EG666304
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-047K02.bB6Ng01-047K02.g
ACCDH872441DH872442
length1,1901,058
definitionDH872441|Mus musculus domesticus DNA, BAC clone: B6Ng01-047K02, 5' end.DH872442|Mus musculus domesticus DNA, BAC clone: B6Ng01-047K02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccgcattcccctccccatgtcccctaccacccagttccctccatc
catctgcctcttatgaatattttattcccccttctaagtgagaatcaaac
ttccttgcttggaccttccttcttgtttagcttctttgggtctgtggaat
ataacatgatacctgtattttatggctaatgtcccttttaagtgaataaa
taccatgaatgtccttttgggactaggttagctcactcagaatgatattc
tcaagttccatccatttgcctacaaagttcatgatgacttgatttttaat
acctgaatagtattccactgtgtagacgtatcacttttttttatccattc
ttcgtctgagggacatctaagttgtttccagtttctggcacttatgaata
aagctgctatgaacatagctgagcaagtgtctttgtgacatgttggagca
tcttttcagtatatgcgcaggagtattatagctgggtcttgaggcagacc
cagttttctgagaaaatgccaaattgatttccaatgtggttgtacaattt
tacacttccaccagcaatgaggaaagttccccttgctccacatccttacc
agcatctgctatctcttgagttttttatcttagcaattctgatggttata
agatggaacctcagagttgttttgatttgcatttccttgatgactaaata
ctttgaacattaagtgcttcttagccattcaagattcctctgttgagaat
tatgtttagatttttacccattttttaaattagattatttgggttgtgga
tgtctaacttcttcagttctttgtaaattttggattagccttctgtagat
gtagggttggtgaagaccccttcccagtctgtggcttctgatttgtccta
ttgacaatgtcctttgcatttataaagctttgcagtttcatgagtgccac
tatcaattgttgatctaagcctgagcttatggatgttctggtcaggactt
gtcctgtacaaattgttcagggtatttcccacttatctcttaggagatta
ggatgcacttttatgtgaggtctaatacccttggactgagcttggtatgg
ggaaattgatctatttacttcctaatgtaagaataggatcagtaattaaa
tgtagtgtgaccagccactgtgtggaggccttcttttgga
gaattcttctttatgtagatgaagcattcctaggcctccaccctagtcaa
taatgtatatccaccttgggattccctacccactccccaaatctataacc
acccttcatcaccctgaataaaattgagttgcctcactgaagcagacctt
agaagtcagtcaacacttccgtattcccagctgtcctgaaccggtccctt
gcctctgcccactttgtcctcaataaccggaggccaccagcccatggggc
tggtgggaaggatcacttgggtctcttaaaggagcaaaaatgagccccct
gagctgggggcaggggttgcatttgccaaagcactaactaaagagctctg
caaaccgcatactcgaatcacctggggatcttcaagaatattgaggttct
ggttagaccacaggccagagaagttgaactctgagtctaggatgcaaaca
gcagttttcttgttgctactcaggcaattccaaacactgattacctggag
aaactaggtctgcaagttctttgcttccagtgcttccagggcaacatggt
ttattattaagaagaacacaaggagcgttaaggaggacatagttcagaat
ttggcaagcttttcccatacagaactagagagtaaatatagtgttttagg
tttcataagacttgaagcaaaattgagcttaccaggtaaatgcttgtata
gcagaaagcaaacaaattccacaactttttgatgaaagatcaaacagtgg
tcagtgagcagtttcatatataactttcatgtcatgaaaactacatctat
tttgacttttaagaccattttaaaatatacagcctattcttaccttgtag
ttcatacaaaattaggcagtaggctagattgggcttgtgggctaaggctt
tttggcgttgatatagaataccatattacctcccattccaaagacaggca
agaaatggacattctagtaaaaagtcacctaccttactactttgaaaatc
caaggtttttctcaaggacagtccgcagaatgtaatacatgtcagacaag
tcttgttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_38596523_38597536
seq2: B6Ng01-047K02.g_119_1125 (reverse)

seq1  CAACAAGACTTGTCTTGACATGTATTTACA-TCTGCGGACTGTCCTTGGA  49
      |||||||||||||| ||||||||| ||||| |||||||||||||||||  
seq2  CAACAAGACTTGTC-TGACATGTA-TTACATTCTGCGGACTGTCCTTGAG  48

seq1  GAAAACTGTGATTTTTCAAAGTTAGGTAAGGTAGTTGACTTTTTTACTTA  99
       |||||  ||  ||||||||||   ||||||||| |||| ||||||||  
seq2  AAAAACCTTGGATTTTCAAAGT--AGTAAGGTAGGTGAC-TTTTTACTAG  95

seq1  GATGTCCATTTCTTGCCTTGTCTTTGG-ATTGGAGGTAATATGGTTATCT  148
       |||||||||||||||| ||||||||| || ||||||||||||||  |||
seq2  AATGTCCATTTCTTGCC-TGTCTTTGGAATGGGAGGTAATATGGTATTCT  144

seq1  ATATCAAACGCCAAAAAGCTTTAGCCCACAAAGCCCAAATCTAGCCTACT  198
      ||||| ||||||||||||| ||||||||| |||||| |||||||||||||
seq2  ATATC-AACGCCAAAAAGCCTTAGCCCAC-AAGCCC-AATCTAGCCTACT  191

seq1  GCCTAATTTTGTATGAACTACAAGGTAAGAATAGGCTGTATATTTTAAAA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAATTTTGTATGAACTACAAGGTAAGAATAGGCTGTATATTTTAAAA  241

seq1  TGGTCTTTAAAAGTCAAAATAGATGTAGTTTTCATGACATGAAAGTTATA  298
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTC-TTAAAAGTCAAAATAGATGTAGTTTTCATGACATGAAAGTTATA  290

seq1  TATGAAACTGCTCACTGACCACTGTTTGATCTTTCATC-AAAAGTTGTGG  347
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TATGAAACTGCTCACTGACCACTGTTTGATCTTTCATCAAAAAGTTGTGG  340

seq1  AATTTGTTTGCTTTCTGCTATACAAGCATTTACCTGGTAAGCTCAATTTT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTTTGCTTTCTGCTATACAAGCATTTACCTGGTAAGCTCAATTTT  390

seq1  GCTTCAAGTCTTATGAAACCTAAAACACTATATTTACTCTCTAGTTCTGT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCAAGTCTTATGAAACCTAAAACACTATATTTACTCTCTAGTTCTGT  440

seq1  ATGGGAAAAGCTTGCCAAATTCTGAACTATGTCCTCCTTAACGCTCCTTG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAAAAGCTTGCCAAATTCTGAACTATGTCCTCCTTAACGCTCCTTG  490

seq1  TGTTCTTCTTAATAATAAACCATGTTGCCCTGGAAGCACTGGAAGCAAAG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTCTTAATAATAAACCATGTTGCCCTGGAAGCACTGGAAGCAAAG  540

seq1  AACTTGCAGACCTAGTTTCTCCAGGTAATCAGTGTTTGGAATTGCCTGAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGCAGACCTAGTTTCTCCAGGTAATCAGTGTTTGGAATTGCCTGAG  590

seq1  TAGCAACAAGAAAACTGCTGTTTGCATCCTAGACTCAGAGTTCAACTTCT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAACAAGAAAACTGCTGTTTGCATCCTAGACTCAGAGTTCAACTTCT  640

seq1  CTGGCCTGTGGTCTAACCAGAACCTCAATATTCTTGAAGATCCCCAGGTG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCTGTGGTCTAACCAGAACCTCAATATTCTTGAAGATCCCCAGGTG  690

seq1  ATTCGAGTATGCGGTTTGCAGAGCTCTTTAGTTAGTGCTTTGGCAAATGC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCGAGTATGCGGTTTGCAGAGCTCTTTAGTTAGTGCTTTGGCAAATGC  740

seq1  AACCCCTGCCCCCAGCTCAGGGGGCTCATTTTTGCTCCTTTAAGAGACCC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCTGCCCCCAGCTCAGGGGGCTCATTTTTGCTCCTTTAAGAGACCC  790

seq1  AAGTGATCCTTCCCACCAGCCCCATGGGCTGGTGGCCTCCGGTTATTGAG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGATCCTTCCCACCAGCCCCATGGGCTGGTGGCCTCCGGTTATTGAG  840

seq1  GACAAAGTGGGCAGAGGCAAGGGACCGGTTCAGGACAGCTGGGAATACGG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAGTGGGCAGAGGCAAGGGACCGGTTCAGGACAGCTGGGAATACGG  890

seq1  AAGTGTTGACTGACTTCTAAGGTCTGCTTCAGTGAGGCAACTCAATTTTA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTTGACTGACTTCTAAGGTCTGCTTCAGTGAGGCAACTCAATTTTA  940

seq1  TTCAGGGTGATGAAGGGTGGTTATAGATTTGGGGAGTGGGTAGGGAATCC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGGTGATGAAGGGTGGTTATAGATTTGGGGAGTGGGTAGGGAATCC  990

seq1  CAAGGTGGATATACATT  1014
      |||||||||||||||||
seq2  CAAGGTGGATATACATT  1007