BAC Information

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BAC

Clone NameB6Ng01-047K04
Chromosome15 (Build37)10 (Build37)
Map Location 64,819,905 - 64,820,936104,053,903 - 104,054,363
singlet/doubletsingletsinglet
Overlap genenone
Upstream gene0910001A06Rik, Ddef1, Adcy8
Downstream geneLOC268812, LOC100040790, LOC665836, C920006C10Rik, Oc90, F930104E18Rik, LOC100040835
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-047K04.bB6Ng01-047K04.g
ACCDH872445DH872446
length1,028783
definitionDH872445|Mus musculus domesticus DNA, BAC clone: B6Ng01-047K04, 5' end.DH872446|Mus musculus domesticus DNA, BAC clone: B6Ng01-047K04, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(64,819,905 - 64,820,936)(104,053,903 - 104,054,363)
sequence
gaattctgaagagaatggaagaagcatgggctctttgttctagagagatt
agcaaggactaaaaacaaccattcgttacattttcgtatctggctgaagc
tagccactgttgtgtttatgatcttgcccacaaacctctttggttcccat
atggtaagaggttttaagcaactcaaactaggtatgtgtgttccaggatc
atgtgtcttgtgtatttatttctttctccattggatcattcttattggac
ccttttcctccattggatcacccttaatagtatttaaaacaaacaaacaa
tcaatcaatcaatcaaacaccctcaaagctttccaggcttgtgctatgag
gctgcagttataacacagagtgcagagaagaaggggcacactcacctgtt
tcctttcctcactttaattcgtcaagcaggacatccaaggcacagcccta
accagacttgtgaaatagtctgttctccagaagaataagcagtcactatg
gtttccagggatattgtgtagagctattttgtggggagataatgatgcag
aacagctggttacaatgaacatgtggtgcagactgggctccacagtgtaa
gctgccacctttcagtgtggtctttgtggaacattctaggcactgggatt
cagaaaatctcttgctttttttaggatatcattacacctggaaagagtgg
gaatagatgaggcagcggatggtatatagataaacaggaccatttcaaat
aactccaagtgctacagcaaaagcaaatggaaggaaaagggaatatgcac
aggtggacatggaggcgagaagtgatgaccagaaaagccttctgacttga
agggcatgtttaaagatggagccctagtggacattcagggatagcatctc
ttcattgtagcaactgctccagaaaaacctgacagtttcaacaagagaag
gttttctattgtgctggatttgtgcgatagttgagaatagaatatttttt
tttctgatctagtcacagacaattgcga
gaattctcacctgaggaatgccgaatggctgggaaacacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagatcaaatattcagatgacagc
agatgctagcgaggatgtggataaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggccgtttctca
gaaaattggacatggtactaccagaggatcccacaatacctctcctgggc
atatatccagaagatgttccaactagtaagaaagaaacatgctccactat
gttcataacagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacaaaaaaatgtggtacatttacacaat
ggagtactactcagctattaaaaagaatgaatttataaaatttttaatta
aaatataatttcatcattttattcctttcctctttcaatcccttccatgt
ttcctccctctatcccgtctcctatttttccctacccttaaattgatggc
cttctttttttattattatcattatacatatgtatatataaatacataaa
tatatcaatacaatgtgctgagttcatttagtgtggtttgtagatatatg
atttcaggaaatacttttgtattggataaaccaattaggaaaatatctct
gggtgaaactaattctccatctcttagttgttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_64819905_64820936
seq2: B6Ng01-047K04.b_40_1067

seq1  GAATTCTGAAGAGAATGGAAGAAGCATGGGCTCTTTGTTCTAGAGAGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAAGAGAATGGAAGAAGCATGGGCTCTTTGTTCTAGAGAGATT  50

seq1  AGCAAGGACTAAAAACAACCATTCGTTACATTTTCGTATCTGGCTGAAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGGACTAAAAACAACCATTCGTTACATTTTCGTATCTGGCTGAAGC  100

seq1  TAGCCACTGTTGTGTTTATGATCTTGCCCACAAACCTCTTTGGTTCCCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCACTGTTGTGTTTATGATCTTGCCCACAAACCTCTTTGGTTCCCAT  150

seq1  ATGGTAAGAGGTTTTAAGCAACTCAAACTAGGTATGTGTGTTCCAGGATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTAAGAGGTTTTAAGCAACTCAAACTAGGTATGTGTGTTCCAGGATC  200

seq1  ATGTGTCTTGTGTATTTATTTCTTTCTCCATTGGATCATTCTTATTGGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTCTTGTGTATTTATTTCTTTCTCCATTGGATCATTCTTATTGGAC  250

seq1  CCTTTTCCTCCATTGGATCACCCTTAATAGTATTTAAAACAAACAAACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTCCTCCATTGGATCACCCTTAATAGTATTTAAAACAAACAAACAA  300

seq1  TCAATCAATCAATCAAACACCCTCAAAGCTTTCCAGGCTTGTGCTATGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCAATCAATCAAACACCCTCAAAGCTTTCCAGGCTTGTGCTATGAG  350

seq1  GCTGCAGTTATAACACAGAGTGCAGAGAAGAAGGGGCACACTCACCTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCAGTTATAACACAGAGTGCAGAGAAGAAGGGGCACACTCACCTGTT  400

seq1  TCCTTTCCTCACTTTAATTCGTCAAGCAGGACATCCAAGGCACAGCCCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCCTCACTTTAATTCGTCAAGCAGGACATCCAAGGCACAGCCCTA  450

seq1  ACCAGACTTGTGAAATAGTCTGTTCTCCAGAAGAATAAGCAGTCACTATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGACTTGTGAAATAGTCTGTTCTCCAGAAGAATAAGCAGTCACTATG  500

seq1  GTTTCCAGGGATATTGTGTAGAGCTATTTTGTGGGGAGATAATGATGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCAGGGATATTGTGTAGAGCTATTTTGTGGGGAGATAATGATGCAG  550

seq1  AACAGCTGGTTACAATGAACATGTGGTGCAGACTGGGCTCCACAGTGTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCTGGTTACAATGAACATGTGGTGCAGACTGGGCTCCACAGTGTAA  600

seq1  GCTGCCACCTTTCAGTGTGGTCTTTGTGGAACATTCTAGGCACTGGGATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCCACCTTTCAGTGTGGTCTTTGTGGAACATTCTAGGCACTGGGATT  650

seq1  CAGAAAATCTCTTGCTTTTTTTAGGATATCATTACACCTGG-AAGAGTGG  699
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CAGAAAATCTCTTGCTTTTTTTAGGATATCATTACACCTGGAAAGAGTGG  700

seq1  GAATAGATGAGGCAGCGGATGGTATATAGATAAACAGGACCATTTCAAAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGATGAGGCAGCGGATGGTATATAGATAAACAGGACCATTTCAAAT  750

seq1  AACTCCAAGTGCTACAGCAAAAGCAAATGGAAGGAAAAGGGAATATGCAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCAAGTGCTACAGCAAAAGCAAATGGAAGGAAAAGGGAATATGCAC  800

seq1  AGGTGGACATGGAGGCGAGAGTGGATGACCAGAAAAGCCTTCTGACTTGA  849
      ||||||||||||||||||||   |||||||||||||||||||||||||||
seq2  AGGTGGACATGGAGGCGAGAAGTGATGACCAGAAAAGCCTTCTGACTTGA  850

seq1  AGGGCATG-TTAAAGATGGAGCCCTAGTGGACAATTCAGGGATAGCATCT  898
      |||||||| ||||||||||||||||||||||| |||||||||||||||||
seq2  AGGGCATGTTTAAAGATGGAGCCCTAGTGGAC-ATTCAGGGATAGCATCT  899

seq1  C-TCATTGTAGCAACTGCCCCAGAAAAACCTGACAGTTTCAACAAAGAGA  947
      | |||||||||||||||| |||||||||||||||||||||||| ||||||
seq2  CTTCATTGTAGCAACTGCTCCAGAAAAACCTGACAGTTTCAAC-AAGAGA  948

seq1  AGGGTTTCTAATGTGGCTGGAATTTGTGCGATAGTTTGAGAATAGAATTA  997
      ||| |||||| ||| ||||| ||||||||||||| |||||||||||| ||
seq2  AGGTTTTCTATTGT-GCTGG-ATTTGTGCGATAG-TTGAGAATAGAA-TA  994

seq1  TTTTTTTTTCTGTATTTAGTCACAGACAATTGCGA  1032
      |||||||||||| || |||||||||||||||||||
seq2  TTTTTTTTTCTG-ATCTAGTCACAGACAATTGCGA  1028

seq1: chr10_104053903_104054363
seq2: B6Ng01-047K04.g_66_537 (reverse)

seq1  TTTAATAG----------CTCCATTGTGTAAATGTACCACA-TTTTCTGT  39
      ||||||||          ||||||||||||||||||||||| |||| |||
seq2  TTTAATAGCTGAGTAGTACTCCATTGTGTAAATGTACCACATTTTTTTGT  50

seq1  ATCTATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTCCTGGCTAT  89
      ||| ||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ATCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCTAT  100

seq1  TATAAATAAGGCTGCTATGAATATAGTGGAGCATGTGTCCTTCTTACCGG  139
      |||||||||||||| |||||| |||||||||||||| || |||||||  |
seq2  TATAAATAAGGCTGTTATGAACATAGTGGAGCATGTTTCTTTCTTACTAG  150

seq1  TTGGGGCATCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATCCTCC  189
      ||||  |||||||||||||||||||||| ||||||||||  |||||||| 
seq2  TTGGAACATCTTCTGGATATATGCCCAGGAGAGGTATTGTGGGATCCTCT  200

seq1  GGTAGTACTATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCCAGAG  239
      |||||||| ||||||||||||||||  ||| ||||||| |||||||||||
seq2  GGTAGTACCATGTCCAATTTTCTGAGAAACGGCCAGACTGATTTCCAGAG  250

seq1  TGGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTT  289
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TGGTTGTACAAGCTTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTT  300

seq1  CTCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCC  339
       ||||||||||||| |||||||||||||| |||||| |||||||||||||
seq2  ATCCACATCCTCGCTAGCATCTGCTGTCATCTGAATATTTGATCTTAGCC  350

seq1  ATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTC  389
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ATTCTGACTGGTGTGAGATGGAATCTCAGGGTTGTTTTGATTTGCATTTC  400

seq1  CCTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTC  439
      ||||||||||||||||| |||||||||||||||||| ||| | |||||||
seq2  CCTGATGATTAAGGATGCTGAACATTTTTTCAGGTGTTTCCCAGCCATTC  450

seq1  GGTATTCCTCAGGTGAGAATTC  461
      || |||||||||||||||||||
seq2  GGCATTCCTCAGGTGAGAATTC  472