BAC Information

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BAC

Clone NameB6Ng01-047M08
Chromosome10 (Build37)18 (Build37)
Map Location 104,053,903 - 104,054,36380,864,951 - 80,865,771
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-047M08.bB6Ng01-047M08.g
ACCDH872537DH872538
length980820
definitionDH872537|Mus musculus domesticus DNA, BAC clone: B6Ng01-047M08, 5' end.DH872538|Mus musculus domesticus DNA, BAC clone: B6Ng01-047M08, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,053,903 - 104,054,363)(80,864,951 - 80,865,771)
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccactgtattagtcagggttctctagagtcacagaacttatg
gatagtctctagataataaaggaatttattgatgacttacagtcggcagc
tcaattcccaacaatcgttcagtcacagctgtgaatggaagtccaaggat
ctagcagttactcagtctcacgcagcaagcaggcgaaaggagcaggagca
agagctagactcccttcttccaatgtccttatattgtctccagcaaaagg
tgtagcccagattaaaggtgtgttccaccacacctttaatcccagatgaa
aggcatagcccagattaaagtgtgttccttactcggagattcaatcttct
ggaatccatagccactatggctcagatctt
gaattccatcggagagactagtagtaatggctggaacctggtgtcctctg
cactcctccctttccgggtacctcccttccccccctaaggatctgtgggg
ctatttcttgcggctgaggctccctccccattcccaccacagaccacctt
ctttgctgcaggactcttgaagactgcttggtgctttcttatggtgccgt
tcaccatcctccttgctaaaaccaattacctagcaatcccgcaactcatc
acagggctctgagttccatgttccagctctcctcctttctgcccaccttc
tggccaggccattcctttgtggtcggcatgaggggctgggggcttatcca
ttggcaaagtggatgacagcaatcggagaaggctataattgtcatcgact
gagtcctggcagccacctgtgtatcctggcatcctacagtgtatctcatc
caaccccggcttcccccaaggcatcagggagctatggggcattgcaagca
tggtgcatgaggtgggcggatctcaggattctaaatagaatgatggggtg
ggggtagggcttctaggagtgaggcagaggaggtgggaagggcggtagct
accagcatggggcagtttcactgcgtcttatcctgtgggctatatactct
gtccacaagatactctgtggtagggtaagcggtgcactggcattgatagg
acgtctgttcacacctcttttctcttcctgaaggagaggacacagggtag
tcatgaaaggatggcctaaacacagtttgtgtgtgtgtgtgtgtgttgct
tgtgtttatggaaatcatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053903_104054363
seq2: B6Ng01-047M08.b_44_514 (reverse)

seq1  TTTAATAG----------CTCCATTGTGTAAATGTACCACATTTTCTGTA  40
      ||||||||          |||||||||||| |||||||||||||||||||
seq2  TTTAATAGCTGAGTAGTACTCCATTGTGTAGATGTACCACATTTTCTGTA  50

seq1  TCTATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTCCTGGCTATT  90
      || ||||||||||||||||||||||||||||||||||| | |||||||||
seq2  TCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGTTTCTGGCTATT  100

seq1  ATAAATAAGGCTGCTATGAATATAGTGGAGCATGTGTCCTTCTTACCGGT  140
      |||||||||||||||||||| |||||||||||||||||||||||||| ||
seq2  ATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTCCTTCTTACCAGT  150

seq1  TGGGGCATCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATCCTCCG  190
      |||||| |||||||||||||||||||| ||||||||||||||||||||||
seq2  TGGGGCTTCTTCTGGATATATGCCCAGGAGAGGTATTGCTGGATCCTCCG  200

seq1  GTAGTACTATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCCAGAGT  240
      |||||||||||||||||||||||| |||||||||||| ||||||||||||
seq2  GTAGTACTATGTCCAATTTTCTGAGGAACCGCCAGACTGATTTCCAGAGT  250

seq1  GGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTC  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTC  300

seq1  TCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  350

seq1  TTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCC  390
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCC  400

seq1  CTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCG  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCG  450

seq1  GTATTCCTCAGGTGAGAATTC  461
      |||||||||||||||||||||
seq2  GTATTCCTCAGGTGAGAATTC  471

seq1: chr18_80864951_80865771
seq2: B6Ng01-047M08.g_67_886 (reverse)

seq1  AGATGCATTTACCATAAACAC-AGCAACACACACACACACACAC-AACTG  48
      ||||| |||| |||||||||| |||||||||||||||||||||| |||||
seq2  AGATG-ATTT-CCATAAACACAAGCAACACACACACACACACACAAACTG  48

seq1  TGTCTAGGCCATCCTTTCATGACTGCCCTGTGTACCTCTCCTTCAGGAAG  98
      ||| |||||||||||||||||||| |||||||| ||||||||||||||||
seq2  TGTTTAGGCCATCCTTTCATGACTACCCTGTGT-CCTCTCCTTCAGGAAG  97

seq1  AG-AAAGAGGTGTGAACAGACGTCCTATCAATGCCAGTTGCACCGCTTAC  147
      || |||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AGAAAAGAGGTGTGAACAGACGTCCTATCAATGCCAG-TGCACCGCTTAC  146

seq1  CCTACCACAGAGTATCTTGTGGACAGAGTATATAGCCCACAGGATAAGAC  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCACAGAGTATCTTGTGGACAGAGTATATAGCCCACAGGATAAGAC  196

seq1  GCAGTGAAACTGCCCCATGCTGGTAGCTACCGCCCTTCCCACCTCCTCTG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGAAACTGCCCCATGCTGGTAGCTACCGCCCTTCCCACCTCCTCTG  246

seq1  CCTCACTCCTAGAAGCCCTACCCCCACCCCATCATTCTATTTAGAATCCT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACTCCTAGAAGCCCTACCCCCACCCCATCATTCTATTTAGAATCCT  296

seq1  GAGATCCGCCCACCTCATGCACCATGCTTGCAATGCCCCATAGCTCCCTG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATCCGCCCACCTCATGCACCATGCTTGCAATGCCCCATAGCTCCCTG  346

seq1  ATGCCTTGGGGGAAGCCGGGGTTGGATGAGATACACTGTAGGATGCCAGG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTTGGGGGAAGCCGGGGTTGGATGAGATACACTGTAGGATGCCAGG  396

seq1  ATACACAGGTGGCTGCCAGGACTCAGTCGATGACAATTATAGCCTTCTCC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACAGGTGGCTGCCAGGACTCAGTCGATGACAATTATAGCCTTCTCC  446

seq1  GATTGCTGTCATCCACTTTGCCAATGGATAAGCCCCCAGCCCCTCATGCC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGCTGTCATCCACTTTGCCAATGGATAAGCCCCCAGCCCCTCATGCC  496

seq1  GACCACAAAGGAATGGCCTGGCCAGAAGGTGGGCAGAAAGGAGGAGAGCT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCACAAAGGAATGGCCTGGCCAGAAGGTGGGCAGAAAGGAGGAGAGCT  546

seq1  GGAACATGGAACTCAGAGCCCTGTGATGAGTTGCGGGATTGCTAGGTAAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACATGGAACTCAGAGCCCTGTGATGAGTTGCGGGATTGCTAGGTAAT  596

seq1  TGGTTTTAGCAAGGAGGATGGTGAACGGCACCATAAGAAAGCACCAAGCA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTAGCAAGGAGGATGGTGAACGGCACCATAAGAAAGCACCAAGCA  646

seq1  GTCTTCAAGAGTCCTGCAGCAAAGAAGGTGGTCTGTGGTGGGAATGGGGA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCAAGAGTCCTGCAGCAAAGAAGGTGGTCTGTGGTGGGAATGGGGA  696

seq1  GGGAGCCTCAGCCGCAAGAAATAGCCCCACAGATCCTTAGGGGGGGAAGG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCCTCAGCCGCAAGAAATAGCCCCACAGATCCTTAGGGGGGGAAGG  746

seq1  GAGGTACCCGGAAAGGGAGGAGTGCAGAGGACACCAGGTTCCAGCCATTA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTACCCGGAAAGGGAGGAGTGCAGAGGACACCAGGTTCCAGCCATTA  796

seq1  CTACTAGTCTCTCCGATGGAATTC  821
      ||||||||||||||||||||||||
seq2  CTACTAGTCTCTCCGATGGAATTC  820