BAC Information

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BAC

Clone NameB6Ng01-048F07
Chromosome10 (Build37)
Map Location 26,164,081 - 26,266,158
singlet/doubletdoublet
Overlap genenone
Upstream geneEpb4.1l2, 2010003K15Rik, EG667513, LOC667519, LOC628697, C030003D03Rik, LOC100040851, LOC15352, Samd3, L3mbtl3, LOC435208
Downstream geneLOC667572, LOC100040349, Arhgap18, Lama2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-048F07.bB6Ng01-048F07.g
ACCDH872921DH872922
length819989
definitionDH872921|Mus musculus domesticus DNA, BAC clone: B6Ng01-048F07, 5' end.DH872922|Mus musculus domesticus DNA, BAC clone: B6Ng01-048F07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(26,164,081 - 26,164,896)(26,265,143 - 26,266,158)
sequence
gaattcaatatagtgctaactttgtaatagaagcttcagtacaactttaa
aaactacttctgcatttgtattttaataaaaaataacattttagaaattt
atcctgaagatgtagccgaaaattaaaaaaatgatacatgcaatatttat
tacaacattgtcttatttgcaaaatattgaaatgagataatgccctcata
taggaaatgcgttgaacacactagtacacagccacacaatggcaatggaa
aaatgtgatgctataaaaaatgatgagatctatatgaaccttaaaagagt
tctacgaaacataattattcagaaagtgtggtttgatgttatttatatga
cataataattgtaggagaaaaaaaattaaatctaaatatgcttcaaaata
aaagaataacacaaaaagcatagcttagcaagctttagatgcaatgctct
gtgttttcagtagaatggagagtagagaagaaagaactatgaagtcttaa
attttactcagtaactagtggtttgccacaagtgacaatagggtggtact
tgtgataatgtattgctcgttttgaaggacagagccagagagcaaataca
ttgttttttttttgggggggggggagccagggttctcattgttggggaag
tcagaggtaaagatgctattgtgaaatgggaggatcagaataataagtaa
atactaccatattattcccccacatatggctttattaattccaaagaagg
tagttgatgactttcccggagataactggcagaacccccctttacgtaga
gtttaaagtcaacatcatc
gaattccagggcatgaccacatgaaccaccatcagaaattccaggacatg
cccacacgaaccaccatttctaaaaatactgactattatggctcctactg
ccttttaaacagggacaagatcttggtcccaaagaaatcttggttttctt
tgtgttttttttttttacactgactttctaaatccccactgtaccccctc
ttctttgtctactcaaaagctcaaaaccaaagtcattttcaaaatgtaat
agactctggcttagatgtatattctcttttctcctcttctttttcacttt
tatagttccaggttttctctattttctgtatcttacttgaaatatttaca
tgtatcctactttgtaggaaaaggtcagatagattagctagatagatttg
attgacagatctaaggaacatgggaggaatcagagttgtttgaggttaat
aaacaacatctattgggaatgaataggttattaaatttaatatttcatgc
aggtgagaaaaatacattcattaataaaattttagtgaagacagtaaaag
aaaaggaaataaaataacctccccacaggccaccaatgagagacacctgc
taaccatatgttaatagcattctcccaccattttgttacatacataatcc
agaccaggtagagccttggtttcctctataaccatctttaggaccctctg
tgctgttctctccaggtctttatcagggaagaagtcgtcatctgatagac
cattcagattaatgcttttatcccttcccaccaaccacacatgaaaactg
ggctgcagaaaactgagattgcaactcaacacctagtattagtgatcaga
ctgatgtgggggtagtgggctcccctctctgtgctgccatcacttacagt
agaaatcctctattgatgctacactcagtccctgagtagctgagccagtc
ttttctgagacctgggactctcatagcctgacttcattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_26164081_26164896
seq2: B6Ng01-048F07.b_44_862

seq1  GAATTCAATATAGTGCTAACTTTGTAATAGAAGCTTCAGTACAACTTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATATAGTGCTAACTTTGTAATAGAAGCTTCAGTACAACTTTAA  50

seq1  AAACTACTTCTGCATTTGTATTTTAATAAAAAATAACATTTTAGAAATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTACTTCTGCATTTGTATTTTAATAAAAAATAACATTTTAGAAATTT  100

seq1  ATCCTGAAGATGTAGCCGAAAATTAAAAAAATGATACATGCAATATTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGAAGATGTAGCCGAAAATTAAAAAAATGATACATGCAATATTTAT  150

seq1  TACAACATTGTCTTATTTGCAAAATATTGAAATGAGATAATGCCCTCATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACATTGTCTTATTTGCAAAATATTGAAATGAGATAATGCCCTCATA  200

seq1  TAGGAAATGCGTTGAACACACTAGTACACAGCCACACAATGGCAATGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAATGCGTTGAACACACTAGTACACAGCCACACAATGGCAATGGAA  250

seq1  AAATGTGATGCTATAAAAAATGATGAGATCTATATGAACCTTAAAAGAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTGATGCTATAAAAAATGATGAGATCTATATGAACCTTAAAAGAGT  300

seq1  TCTACGAAACATAATTATTCAGAAAGTGTGGTTTGATGTTATTTATATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACGAAACATAATTATTCAGAAAGTGTGGTTTGATGTTATTTATATGA  350

seq1  CATAATAATTGTAGGAGAAAAAAAATTAAATCTAAATATGCTTCAAAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATAATTGTAGGAGAAAAAAAATTAAATCTAAATATGCTTCAAAATA  400

seq1  AAAGAATAACACAAAAAGCATAGCTTAGCAAGCTTTAGATGCAATGCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATAACACAAAAAGCATAGCTTAGCAAGCTTTAGATGCAATGCTCT  450

seq1  GTGTTTTCAGTAGAATGGAGAGTAGAGAAGAAAGAACTATGAAGTCTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTTCAGTAGAATGGAGAGTAGAGAAGAAAGAACTATGAAGTCTTAA  500

seq1  ATTTTACTCAGTAACTAGTGGTTTGCCACAAGTGACAATAGGGTGGTACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTACTCAGTAACTAGTGGTTTGCCACAAGTGACAATAGGGTGGTACT  550

seq1  TGTGATAATGTATTGCTCGTTTTGAAGGACAGAGCCAGAGAGCAAATACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATAATGTATTGCTCGTTTTGAAGGACAGAGCCAGAGAGCAAATACA  600

seq1  TTG-TTTTTTTTTGGGGGGGGGGGAGCCAGGGTTCTCATTGTTGGGGAAG  649
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTTTTTTTGGGGGGGGGGGAGCCAGGGTTCTCATTGTTGGGGAAG  650

seq1  TCAGAGGTAAAGATGCTATTGTGAAAGGGGAGGATCAGAATAATAAGTAA  699
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TCAGAGGTAAAGATGCTATTGTGAAATGGGAGGATCAGAATAATAAGTAA  700

seq1  ATACTACCATAATATTCCCCCACATAT-GCCTTATTAATTCAAAAGAAGG  748
      ||||||||||| ||||||||||||||| || |||||||||| ||||||||
seq2  ATACTACCATATTATTCCCCCACATATGGCTTTATTAATTCCAAAGAAGG  750

seq1  TAG-TGATGACTTT-CCAGAGATAAACTGGCAG-ACACCCCCTTACGTAA  795
      ||| |||||||||| || ||||| ||||||||| || |||| |||||| |
seq2  TAGTTGATGACTTTCCCGGAGAT-AACTGGCAGAACCCCCCTTTACGT-A  798

seq1  GAGTTTAAAGTCAACACCATC  816
      |||||||||||||||| ||||
seq2  GAGTTTAAAGTCAACATCATC  819

seq1: chr10_26265143_26266158
seq2: B6Ng01-048F07.g_66_1054 (reverse)

seq1  AAATGAAAGTCAAGGCTATGAGAGTCACAGGGTCTTTCAGGAAAAGACTG  50
      ||||| ||||| |||||||||||||| ||||   | ||| ||||||||||
seq2  AAATG-AAGTC-AGGCTATGAGAGTCCCAGG---TCTCA-GAAAAGACTG  44

seq1  TGCTTCCAGCTACTCAGGGACTTGAAGGTTGTATGCATTCAATATAGAAG  100
       |||  ||||||||||||||||    |  |||| ||| ||||||    ||
seq2  -GCT--CAGCTACTCAGGGACT----GAGTGTA-GCA-TCAATA---GAG  82

seq1  GATTTCTACTGTAGGTTTGATTGGCAGCACAGAGAGGGGAGGCACACTAC  150
      ||||||||||||| |  ||| ||||||||||||||||||| || ||||||
seq2  GATTTCTACTGTAAG--TGA-TGGCAGCACAGAGAGGGGA-GCCCACTAC  128

seq1  ACCCCACATCAGTCTGATCAACTAATACTAGTGTGTTGATGTTGCAATCT  200
       |||||||||||||||||| ||||||||||| ||||||| ||||||||||
seq2  -CCCCACATCAGTCTGATC-ACTAATACTAG-GTGTTGA-GTTGCAATCT  174

seq1  CAGTTTTTCTGCAGCCCAGTTTTCATGTGTGGTTGGTGGGAAGGGAT-AG  249
      ||| ||||||||||||||||||||||||||||||||||||||||||| | 
seq2  CAG-TTTTCTGCAGCCCAGTTTTCATGTGTGGTTGGTGGGAAGGGATAAA  223

seq1  AGCATTATCCTGAATGGTCTATCAGATGACGACTTCTTCCCTGATTAAGA  299
      |||||||  |||||||||||||||||||||||||||||||||||| ||||
seq2  AGCATTAATCTGAATGGTCTATCAGATGACGACTTCTTCCCTGATAAAGA  273

seq1  CCTGGAGAGAACAGCACAGAGGGTCCTAAAGATGGCTATAGAGGAAACCA  349
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CCTGGAGAGAACAGCACAGAGGGTCCTAAAGATGGTTATAGAGGAAACCA  323

seq1  AGGCTCTACCTGGTCTGGATTATGTATGGTAACAAAATGGTGGGAGAATG  399
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AGGCTCTACCTGGTCTGGATTATGTAT-GTAACAAAATGGTGGGAGAATG  372

seq1  CTATTAACATATGGTTAGCAGGTGTCTCTCATTGGTGGCCTGTGGGGAGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTAACATATGGTTAGCAGGTGTCTCTCATTGGTGGCCTGTGGGGAGG  422

seq1  TTATTTTATTTCCTTTTCTTTTACTGTCTTCACTAAAATTTTATTAATGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTATTTCCTTTTCTTTTACTGTCTTCACTAAAATTTTATTAATGA  472

seq1  ATGTATTTTTCTCACCTGCATGAAATATTAAATTTAATAACCTATTCATT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATTTTTCTCACCTGCATGAAATATTAAATTTAATAACCTATTCATT  522

seq1  CCCAATAGATGTTGTTTATTAACCTCAAACAACTCTGATTCCTCCCATGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAATAGATGTTGTTTATTAACCTCAAACAACTCTGATTCCTCCCATGT  572

seq1  TCCTTAGATCTGTCAATCAAATCTATCTAGCTAATCTATCTGACCTTTTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAGATCTGTCAATCAAATCTATCTAGCTAATCTATCTGACCTTTTC  622

seq1  CTACAAAGTAGGATACATGTAAATATTTCAAGTAAGATACAGAAAATAGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAAAGTAGGATACATGTAAATATTTCAAGTAAGATACAGAAAATAGA  672

seq1  GAAAACCTGGAACTATAAAAGTGAAAAAGAAGAGGAGAAAAGAGAATATA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACCTGGAACTATAAAAGTGAAAAAGAAGAGGAGAAAAGAGAATATA  722

seq1  CATCTAAGCCAGAGTCTATTACATTTTGAAAATGACTTTGGTTTTGAGCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTAAGCCAGAGTCTATTACATTTTGAAAATGACTTTGGTTTTGAGCT  772

seq1  TTTGAGTAGACAAAGAAGAGGGGGTACAGTGGGGATTTAGAAAGTCAGTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGTAGACAAAGAAGAGGGGGTACAGTGGGGATTTAGAAAGTCAGTG  822

seq1  TAAAAAAAAAAAACACAAAGAAAACCAAGATTTCTTTGGGACCAAGATCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAAAAAAACACAAAGAAAACCAAGATTTCTTTGGGACCAAGATCT  872

seq1  TGTCCCTGTTTAAAAGGCAGTAGGAGCCATAATAGTCAGTATTTTTAGAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCTGTTTAAAAGGCAGTAGGAGCCATAATAGTCAGTATTTTTAGAA  922

seq1  ATGGTGGTTCGTGTGGGCATGTCCTGGAATTTCTGATGGTGGTTCATGTG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGGTTCGTGTGGGCATGTCCTGGAATTTCTGATGGTGGTTCATGTG  972

seq1  GTCATGCCCTGGAATTC  1016
      |||||||||||||||||
seq2  GTCATGCCCTGGAATTC  989