BAC Information

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BAC

Clone NameB6Ng01-048H17
Chromosome10 (Build37)
Map Location 98,354,372 - 98,460,436
singlet/doubletdoublet
Overlap geneAtp2b1
Upstream geneEG667438, EG432494
Downstream geneWdr51b, Galnt4, Dusp6, LOC100042222, Gad1-ps, LOC100042232, LOC667502, Csl, LOC100042246
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-048H17.bB6Ng01-048H17.g
ACCDH873026DH873027
length1,056462
definitionDH873026|Mus musculus domesticus DNA, BAC clone: B6Ng01-048H17, 5' end.DH873027|Mus musculus domesticus DNA, BAC clone: B6Ng01-048H17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(98,459,352 - 98,460,436)(98,354,372 - 98,354,839)
sequence
gaattcatttctgcaatctgtcctctgacttgcacatgcacaccgtgtga
cacacaaacatgcagacacaatacatttacaaaacaaacaaacttaaaac
agtaagccaaacaaattcttataactggccgtttgtaaaacatttagaac
actgaagggagaatgtcagcacggaagaagacggttagatttctcattgt
cagaaatgttctttaaggagaaatggtaactaccttcccaagttacaaga
gcagcatccttctgttgagagtaacctgcaaacccattatgaaaggcaaa
tcccagatggcatgtctcaacatcagcagggaaggttggaccagagggag
agtgggtagggcagataggcacaatgggcaagggccagaatgagcaggac
tctgcgagccataggaagggaggcaaaagattttacacatgcaaatatta
tctgaattgtttctggaaatataaatctgcccacatatggaagacttcct
tgtaggaacagcaaagcagaaacaacaaggctgaggaactgggcccaagc
tcagcatcctgcctcgtgtgccaaatcctgatttgcacacaccctgacct
caactttatgagtgggagagagggtgcggtgagacctcacaaggctgctg
ctcctcgtgaagtgagcggctctgtgcacagaagtcctggaatcactgcc
tgcatttttaaggaatggaaaccctccactttccaggccagaaaaggatg
ccctggcgtgtatttctaaccagcggaggctttaaacaatagggctactt
aactatccatcactaaccttgactgagtaagcaagtgagatggtgactgc
aagcggaagaccttccggcacggcgaccactagaactgtgactcaataat
gagaacttcacgaagtactggatgtagatcgtgtgcactctgcaagcatg
tcttttctgaaccaaagtacgatcacaaatacacactagatgataactgt
gatgcagactcgcaatctatacagcagaacagacaattgttaatgacgcg
ctaccc
aggaatagccgagaagaagcaggtacagggggaataagaactagctaagc
tgagaacaaagagaatttagggtcttggggaaactttgaaggaaagacag
gagcatagagaactctacctcagatgaaacaaatctctcctgaatgactg
ctcaccacacaaggtatggttataaagtggtgaaagtgtatcatttcaac
tttctctcacatgaatgatgttccttccataaaccaccttaggaggtcct
gatcttcctaaggctggggtgatgggtggctcagtggttaggggcactgt
ctgctcttccagagaatctgcttcaattcccagcacccacatgggagccc
acaactgtctgtaactccagttccaggtgatctgatactcttcacacaga
catacatgcacatgacaggcagacatcagtgcacatgaaagagggagagg
ggggaggagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_98459352_98460436
seq2: B6Ng01-048H17.b_46_1101 (reverse)

seq1  GGGTAGCGGCTGCTACATTTAAACAATTGTCCTGTTTCCTGCCTGTATAG  50
      |||||||    ||  ||||  ||||||||| |||||  ||| ||||||||
seq2  GGGTAGC----GCGTCATT--AACAATTGT-CTGTT--CTG-CTGTATAG  40

seq1  GTCTGCTGATGTCTGCCATCACAGTTATCATCCTAGTGTTGTATTTTGTG  100
       | ||| || ||||| ||||||||||||||| |||||| |||| ||||||
seq2  AT-TGC-GA-GTCTG-CATCACAGTTATCAT-CTAGTG-TGTA-TTTGTG  83

seq1  ATCGATACCTTCTGGGTTCAGAAAAGACCATGGCTTGCAGAGTGCACACC  150
      |||| ||| ||   ||||||||||||| ||| |||||||||||||||| |
seq2  ATCG-TACTTT---GGTTCAGAAAAGA-CAT-GCTTGCAGAGTGCACA-C  126

seq1  GATCTACATCCAGTACTTCGTGAAGTTCTTCATTATTGGAGTCACAGTTC  200
      |||||||||||||||||||||||||||| |||||||| ||||||||||||
seq2  GATCTACATCCAGTACTTCGTGAAGTTC-TCATTATT-GAGTCACAGTTC  174

seq1  TAGTGGTCGCCGTGCCGGAAGGTCTTCCGCTGGCAGTCACCATCTCACTG  250
      ||||||||||||||||||||||||||||||| ||||||||||||||||| 
seq2  TAGTGGTCGCCGTGCCGGAAGGTCTTCCGCTTGCAGTCACCATCTCACTT  224

seq1  GCTTACTCAGTCAAGGTTAGTGATGGATAGTTAAGTAGCCCTATTGTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTACTCAGTCAAGGTTAGTGATGGATAGTTAAGTAGCCCTATTGTTTA  274

seq1  AAGCCTCCGCTGGTTAGAAAATACACGCCCAGGGCATCCTTTTCTGGCCT  350
      ||||||||||||||||| ||||||||| ||||||||||||||||||||||
seq2  AAGCCTCCGCTGGTTAG-AAATACACG-CCAGGGCATCCTTTTCTGGCCT  322

seq1  GGAAAGTGGAGGGTTTCCATTTCCTTAAAAATGCAGGCAGTGATTCCAGG  400
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GGAAAGTGGAGGGTTTCCA-TTCCTTAAAAATGCAGGCAGTGATTCCAGG  371

seq1  ACTTCTGTGCACAGAGCCGCTCACTTCACGAGGAGCAGCAGCCTTGTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTGTGCACAGAGCCGCTCACTTCACGAGGAGCAGCAGCCTTGTGAG  421

seq1  GTCTCACCGCACCCTCTCTCCCACTCATAAAGTTGAGGTCAGGGTGTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCACCGCACCCTCTCTCCCACTCATAAAGTTGAGGTCAGGGTGTGTG  471

seq1  CAAATCAGGATTTGGCACACGAGGCAGGATGCTGAGCTTGGGCCCAGTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCAGGATTTGGCACACGAGGCAGGATGCTGAGCTTGGGCCCAGTTC  521

seq1  CTCAGCCTTGTTGTTTCTGCTTTGCTGTTCCTACAAGGAAGTCTTCCATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCCTTGTTGTTTCTGCTTTGCTGTTCCTACAAGGAAGTCTTCCATA  571

seq1  TGTGGGCAGATTTATATTTCCAGAAACAATTCAGATAATATTTGCATGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGCAGATTTATATTTCCAGAAACAATTCAGATAATATTTGCATGTG  621

seq1  TAAAATCTTTTGCCTCCCTTCCTATGGCTCGCAGAGTCCTGCTCATTCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATCTTTTGCCTCCCTTCCTATGGCTCGCAGAGTCCTGCTCATTCTG  671

seq1  GCCCTTGCCCATTGTGCCTATCTGCCCTACCCACTCTCCCTCTGGTCCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTGCCCATTGTGCCTATCTGCCCTACCCACTCTCCCTCTGGTCCAA  721

seq1  CCTTCCCTGCTGATGTTGAGACATGCCATCTGGGATTTGCCTTTCATAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCCTGCTGATGTTGAGACATGCCATCTGGGATTTGCCTTTCATAAT  771

seq1  GGGTTTGCAGGTTACTCTCAACAGAAGGATGCTGCTCTTGTAACTTGGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTGCAGGTTACTCTCAACAGAAGGATGCTGCTCTTGTAACTTGGGA  821

seq1  AGGTAGTTACCATTTCTCCTTAAAGAACATTTCTGACAATGAGAAATCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGTTACCATTTCTCCTTAAAGAACATTTCTGACAATGAGAAATCTA  871

seq1  ACCGTCTTCTTCCGTGCTGACATTCTCCCTTCAGTGTTCTAAATGTTTTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGTCTTCTTCCGTGCTGACATTCTCCCTTCAGTGTTCTAAATGTTTTA  921

seq1  CAAACGGCCAGTTATAAGAATTTGTTTGGCTTACTGTTTTAAGTTTGTTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACGGCCAGTTATAAGAATTTGTTTGGCTTACTGTTTTAAGTTTGTTT  971

seq1  GTTTTGTAAATGTATTGTGTCTGCATGTTTGTGTGTCACACGGTGTGCAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTAAATGTATTGTGTCTGCATGTTTGTGTGTCACACGGTGTGCAT  1021

seq1  GTGCAAGTCAGAGGACAGATTGCAGAAATGAATTC  1085
      |||||||||||||||||||||||||||||||||||
seq2  GTGCAAGTCAGAGGACAGATTGCAGAAATGAATTC  1056

seq1: chr10_98354372_98354839
seq2: B6Ng01-048H17.g_68_535

seq1  GAATTCAGGAATAGCCGAGAAGAAGCAGGTACAGGGGGAATAAGAACTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGAATAGCCGAGAAGAAGCAGGTACAGGGGGAATAAGAACTAG  50

seq1  CTAAGCTGAGAACAAAGAGAATTTAGGGTCTTGGGGAAACTTTGAAGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCTGAGAACAAAGAGAATTTAGGGTCTTGGGGAAACTTTGAAGGAA  100

seq1  AGACAGGAGCATAGAGAACTCTACCTCAGATGAAACAAATCTCTCCTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGGAGCATAGAGAACTCTACCTCAGATGAAACAAATCTCTCCTGAA  150

seq1  TGACTGCTCACCACACAAGGTATGGTTATAAAGTGGTGAAAGTGTATCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGCTCACCACACAAGGTATGGTTATAAAGTGGTGAAAGTGTATCAT  200

seq1  TTCAACTTTCTCTCACATGAATGATGTTCCTTCCATAAACCACCTTAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACTTTCTCTCACATGAATGATGTTCCTTCCATAAACCACCTTAGGA  250

seq1  GGTCCTGATCTTCCTAAGGCTGGGGTGATGGGTGGCTCAGTGGTTAGGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTGATCTTCCTAAGGCTGGGGTGATGGGTGGCTCAGTGGTTAGGGG  300

seq1  CACTGTCTGCTCTTCCAGAGAATCTGCTTCAATTCCCAGCACCCACATGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTCTGCTCTTCCAGAGAATCTGCTTCAATTCCCAGCACCCACATGG  350

seq1  GAGCCCACAACTGTCTGTAACTCCAGTTCCAGGTGATCTGATACTCTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCCACAACTGTCTGTAACTCCAGTTCCAGGTGATCTGATACTCTTCA  400

seq1  CACAGACATACATGCACATGACAGGCAGACATCAGTGCACATGAAAGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGACATACATGCACATGACAGGCAGACATCAGTGCACATGAAAGAGG  450

seq1  GAGAGGGGGGAGGAGAGA  468
      ||||||||||||||||||
seq2  GAGAGGGGGGAGGAGAGA  468