BAC Information

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BAC

Clone NameB6Ng01-048H23
Chromosome10 (Build37)
Map Location 98,354,372 - 98,460,436
singlet/doubletdoublet
Overlap geneAtp2b1
Upstream geneEG667438, EG432494
Downstream geneWdr51b, Galnt4, Dusp6, LOC100042222, Gad1-ps, LOC100042232, LOC667502, Csl, LOC100042246
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-048H23.bB6Ng01-048H23.g
ACCDH873038DH873039
length1,139464
definitionDH873038|Mus musculus domesticus DNA, BAC clone: B6Ng01-048H23, 5' end.DH873039|Mus musculus domesticus DNA, BAC clone: B6Ng01-048H23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(98,459,295 - 98,460,436)(98,354,372 - 98,354,841)
sequence
gaattcatttctgcaatctgtcctctgacttgcacatgcacaccgtgtga
cacacaaacatgcagacacaatacatttacaaaacaaacaaacttaaaac
agtaagccaaacaaattcttataactggccgtttgtaaaacatttagaac
actgaagggagaatgtcagcacggaagaagacggttagatttctcattgt
cagaaatgttctttaaggagaaatggtaactaccttcccaagttacaaga
gcagcatccttctgttgagagtaacctgcaaacccattatgaaaggcaaa
tcccagatggcatgtctcaacatcagcagggaaggttggaccagagggag
agtgggtagggcagataggcacaatgggcaagggccagaatgagcaggac
tctgcgagccataggaagggaggcaaaagattttacacatgcaaatatta
tctgaattgtttctggaaatataaatctgcccacatatggaagacttcct
tgtaggaacagcaaagcagaaacaacaaggctgaggaactgggcccaagc
tcagcatcctgcctcgtgtgccaaatcctgatttgcacacaccctgacct
caactttatgagtgggagagagggtgcggtgagacctcacaaggctgctg
ctcctcgtgaagtgagcggctctgtgcacagaagtcctggaatcactgcc
tgcatttttaaggaaatggaaaccctccactttccaggccagaaaaggat
gccctgggcgtgtattttctaaccagcggaggctttaaacaatagggcta
cttaactatccatcactaaccttgactgagtaagccagtgagatggtgac
tgccaacggaagaccttcccggcacggcgaccactagaacttgtgactcc
ataaatgaagaacttcacgaagtactggaatgtagatcggttgtgcactc
tgcaagcatggtcttttctgaacccagaagtatcgatcacaaatacacac
taggatgataactgtgatgcagaaatcagcagacctatacaggcaggaaa
cagacaattgttaaagagcagccgcttaccactgcactctgtaatgcaca
ttaggctatcttaaaacagctaagattcctttcatttct
aggaatagccgagaagaagcaggtacagggggaataagaactagctaagc
tgagaacaaagagaatttagggtcttggggaaactttgaaggaaagacag
gagcatagagaactctacctcagatgaaacaaatctctcctgaatgactg
ctcaccacacaaggtatggttataaagtggtgaaagtgtatcatttcaac
tttctctcacatgaatgatgttccttccataaaccaccttaggaggtcct
gatcttcctaaggctggggtgatgggtggctcagtggttaggggcactgt
ctgctcttccagagaatctgcttcaattcccagcacccacatgggagccc
acaactgtctgtaactccagttccaggtgatctgatactcttcacacaga
catacatgcacatgacaggcagacatcagtgcacatgaaagagggagagg
ggggaggagagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_98459295_98460436
seq2: B6Ng01-048H23.b_43_1181 (reverse)

seq1  AGAAAT-------ATCTTAGCTGGTTATAAGAATAGCCTTATAGTGCTAT  43
      ||||||       ||||||||| ||| |||| ||||||| || |||| ||
seq2  AGAAATGAAAGGAATCTTAGCT-GTTTTAAG-ATAGCCTAAT-GTGC-AT  46

seq1  TACAGAGTTGCAGTGGGTAGCGGCTGCTACATTTAAACAATTGTCCTGTT  93
      ||||||| ||||||||  ||||||||||    || ||||||||| |||||
seq2  TACAGAG-TGCAGTGGTAAGCGGCTGCT---CTTTAACAATTGT-CTGTT  91

seq1  TCCTGCCTGTATAGGTCTGCTGATGTCTGCCATCACAGTTATCATCCTAG  143
      |||||||||||||||||||||||| |||| ||||||||||||||||||||
seq2  TCCTGCCTGTATAGGTCTGCTGATTTCTG-CATCACAGTTATCATCCTAG  140

seq1  TGTTGTATTTTGTGATCGATACCTTCTGGGTTCAGAAAAGACCATGGCTT  193
      || |||| ||||||||||||| ||||||||||||||||||||||| ||||
seq2  TG-TGTA-TTTGTGATCGATA-CTTCTGGGTTCAGAAAAGACCAT-GCTT  186

seq1  GCAGAGTGCAC-ACCGATCTACA-TCCAGTACTTCGTGAAGTTCTTCATT  241
      ||||||||||| ||||||||||| ||||||||||||||||||||||||||
seq2  GCAGAGTGCACAACCGATCTACATTCCAGTACTTCGTGAAGTTCTTCATT  236

seq1  ATTGGAGTCAC-AGTTCTAGTGGTCGCCGTGCC-GGAAGGTCTTCCGCTG  289
        ||||||||| ||||||||||||||||||||| ||||||||||||| ||
seq2  TATGGAGTCACAAGTTCTAGTGGTCGCCGTGCCGGGAAGGTCTTCCGTTG  286

seq1  GCAGTCACCATCTCACTGGCTTACTCAGTCAAGGTTAGTGATGGATAGTT  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCACCATCTCACTGGCTTACTCAGTCAAGGTTAGTGATGGATAGTT  336

seq1  AAGTAGCCCTATTGTTTAAAGCCTCCGCTGGTTAGAAAATACACGCCCAG  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGCCCTATTGTTTAAAGCCTCCGCTGGTTAGAAAATACACGCCCAG  386

seq1  GGCATCCTTTTCTGGCCTGGAAAGTGGAGGGTTTCCATTTCCTTAAAAAT  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCCTTTTCTGGCCTGGAAAGTGGAGGGTTTCCATTTCCTTAAAAAT  436

seq1  GCAGGCAGTGATTCCAGGACTTCTGTGCACAGAGCCGCTCACTTCACGAG  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCAGTGATTCCAGGACTTCTGTGCACAGAGCCGCTCACTTCACGAG  486

seq1  GAGCAGCAGCCTTGTGAGGTCTCACCGCACCCTCTCTCCCACTCATAAAG  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGCAGCCTTGTGAGGTCTCACCGCACCCTCTCTCCCACTCATAAAG  536

seq1  TTGAGGTCAGGGTGTGTGCAAATCAGGATTTGGCACACGAGGCAGGATGC  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGTCAGGGTGTGTGCAAATCAGGATTTGGCACACGAGGCAGGATGC  586

seq1  TGAGCTTGGGCCCAGTTCCTCAGCCTTGTTGTTTCTGCTTTGCTGTTCCT  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTTGGGCCCAGTTCCTCAGCCTTGTTGTTTCTGCTTTGCTGTTCCT  636

seq1  ACAAGGAAGTCTTCCATATGTGGGCAGATTTATATTTCCAGAAACAATTC  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGAAGTCTTCCATATGTGGGCAGATTTATATTTCCAGAAACAATTC  686

seq1  AGATAATATTTGCATGTGTAAAATCTTTTGCCTCCCTTCCTATGGCTCGC  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAATATTTGCATGTGTAAAATCTTTTGCCTCCCTTCCTATGGCTCGC  736

seq1  AGAGTCCTGCTCATTCTGGCCCTTGCCCATTGTGCCTATCTGCCCTACCC  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCCTGCTCATTCTGGCCCTTGCCCATTGTGCCTATCTGCCCTACCC  786

seq1  ACTCTCCCTCTGGTCCAACCTTCCCTGCTGATGTTGAGACATGCCATCTG  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCCCTCTGGTCCAACCTTCCCTGCTGATGTTGAGACATGCCATCTG  836

seq1  GGATTTGCCTTTCATAATGGGTTTGCAGGTTACTCTCAACAGAAGGATGC  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTGCCTTTCATAATGGGTTTGCAGGTTACTCTCAACAGAAGGATGC  886

seq1  TGCTCTTGTAACTTGGGAAGGTAGTTACCATTTCTCCTTAAAGAACATTT  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTTGTAACTTGGGAAGGTAGTTACCATTTCTCCTTAAAGAACATTT  936

seq1  CTGACAATGAGAAATCTAACCGTCTTCTTCCGTGCTGACATTCTCCCTTC  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACAATGAGAAATCTAACCGTCTTCTTCCGTGCTGACATTCTCCCTTC  986

seq1  AGTGTTCTAAATGTTTTACAAACGGCCAGTTATAAGAATTTGTTTGGCTT  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTCTAAATGTTTTACAAACGGCCAGTTATAAGAATTTGTTTGGCTT  1036

seq1  ACTGTTTTAAGTTTGTTTGTTTTGTAAATGTATTGTGTCTGCATGTTTGT  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTTTAAGTTTGTTTGTTTTGTAAATGTATTGTGTCTGCATGTTTGT  1086

seq1  GTGTCACACGGTGTGCATGTGCAAGTCAGAGGACAGATTGCAGAAATGAA  1139
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCACACGGTGTGCATGTGCAAGTCAGAGGACAGATTGCAGAAATGAA  1136

seq1  TTC  1142
      |||
seq2  TTC  1139

seq1: chr10_98354372_98354841
seq2: B6Ng01-048H23.g_67_536

seq1  GAATTCAGGAATAGCCGAGAAGAAGCAGGTACAGGGGGAATAAGAACTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGAATAGCCGAGAAGAAGCAGGTACAGGGGGAATAAGAACTAG  50

seq1  CTAAGCTGAGAACAAAGAGAATTTAGGGTCTTGGGGAAACTTTGAAGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCTGAGAACAAAGAGAATTTAGGGTCTTGGGGAAACTTTGAAGGAA  100

seq1  AGACAGGAGCATAGAGAACTCTACCTCAGATGAAACAAATCTCTCCTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGGAGCATAGAGAACTCTACCTCAGATGAAACAAATCTCTCCTGAA  150

seq1  TGACTGCTCACCACACAAGGTATGGTTATAAAGTGGTGAAAGTGTATCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGCTCACCACACAAGGTATGGTTATAAAGTGGTGAAAGTGTATCAT  200

seq1  TTCAACTTTCTCTCACATGAATGATGTTCCTTCCATAAACCACCTTAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACTTTCTCTCACATGAATGATGTTCCTTCCATAAACCACCTTAGGA  250

seq1  GGTCCTGATCTTCCTAAGGCTGGGGTGATGGGTGGCTCAGTGGTTAGGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTGATCTTCCTAAGGCTGGGGTGATGGGTGGCTCAGTGGTTAGGGG  300

seq1  CACTGTCTGCTCTTCCAGAGAATCTGCTTCAATTCCCAGCACCCACATGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTCTGCTCTTCCAGAGAATCTGCTTCAATTCCCAGCACCCACATGG  350

seq1  GAGCCCACAACTGTCTGTAACTCCAGTTCCAGGTGATCTGATACTCTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCCACAACTGTCTGTAACTCCAGTTCCAGGTGATCTGATACTCTTCA  400

seq1  CACAGACATACATGCACATGACAGGCAGACATCAGTGCACATGAAAGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGACATACATGCACATGACAGGCAGACATCAGTGCACATGAAAGAGG  450

seq1  GAGAGGGGGGAGGAGAGAGA  470
      ||||||||||||||||||||
seq2  GAGAGGGGGGAGGAGAGAGA  470