BAC Information

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BAC

Clone NameB6Ng01-048K18
Chromosome10 (Build37)
Map Location 40,220,181 - 40,220,665
singlet/doubletsinglet
Overlap genenone
Upstream geneFyn, Traf3ip2, LOC667964, EG667970, E130307A14Rik, Rev3l, EG666304, LOC213332, 4930547M16Rik, LOC667982, 2010001E11Rik, LOC667994, LOC100041085, BC021785, AI317395, EG666342, Slc16a10, Bxdc1, 2410016F19Rik, Amd1, Amd2, LOC668051, Cdc2l6, LOC666374
Downstream geneSlc22a16, Ddo, 9030224M15Rik, Cdc40, Wasf1, Gpr6, A530089I17Rik, LOC633979, Zbtb24, Mical1, Smpd2, Ppil6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-048K18.bB6Ng01-048K18.g
ACCDH873164DH873165
length841481
definitionDH873164|Mus musculus domesticus DNA, BAC clone: B6Ng01-048K18, 5' end.DH873165|Mus musculus domesticus DNA, BAC clone: B6Ng01-048K18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgtttagctctgtactccacttttcaattgagttatttggtt
tgttggtgtctaacattttgagttcttggatatcattagtcctctgtcag
cggtggggttggtgaagattccttcctaaactgtaggctgccattttgtc
ctattgatgatgtcctttgccttattgcagtttcttgagggcccatttat
cagttgttgatattagaacctgagctattggtgtccattctgttcaggaa
cttgtctcctgtaccaatgtgttcaagagtattctccactttctcttctg
ttagattctatgtattcagttttatgttgaggtctttgatccacttggac
ttgagttttctgcaaggtgataaatactgatctctttgcattcttctaca
tgcagacacccagttagaccagcaccatttgttaaaaaagcctttctctg
ttccattatgtggttttggcctcttgatcaaaaagtaagtgtccataggg
gattattttggggtcttctattcaattccactgatcactatgtctatttt
tgtttctggactaagcctgtgtggcattccagagagaacagtacagcagc
aaagtgtgggtttgccacgtgtgcaccacaaaggccatggcggttttgaa
gcatggggctggccaatgggaacttagtgaggtaggtggagagattttgg
agctctgagttagaaagtatcccctttctagaaaaggccagccattgcca
ccagtgcatagccgtccagcccgccggggcaaaaattagctgggtgtact
agggaacttgccattccccctttattatttcccacaacagc
tcaccccattcaagagatggcagactgttaaaaaatatgtagatatattc
aataaatattctgttcacatgcacagagacatggaagagcttttaataca
gagcttcaactggtttggaacagttgttatagacaaatgctgtgtagtag
gcagagtgttcatcgaaaatatgagttattgttgagtgtggtggtgtatg
cttataatgtgaaatctcgggagggaaactgaggcaggagcatcggggaa
tgcagggtgagatcctgtctcaaaaaataaaaaagaagctgggcgtggtg
gcgcacgcctttaatcccagcactggggaggcagaggcaggcggatttct
gagttcgaggccagcctggtctacaaagtgagttccaggacagccaggcg
atacagagaaacactgtctcaaaaaaaaaaaaaaaagaacaaaaccccac
aaagaaacaagaaatagcaacaagagcttgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_40220181_40220665
seq2: B6Ng01-048K18.g_35_521

seq1  GAATTCTCACTC--ATCAAGAGATGGCAGACTGTTAAAAAATATGTAGAT  48
      |||||||||| |   |||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACCCCATTCAAGAGATGGCAGACTGTTAAAAAATATGTAGAT  50

seq1  ATATTCAATAAATATTCTGTTCACATGCACAGAGACATGGAAGAGCTTTT  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCAATAAATATTCTGTTCACATGCACAGAGACATGGAAGAGCTTTT  100

seq1  AATACAGAGCTTCAACTGGTTTGGAACAGTTGTTATAGACAAATGCTGTG  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAGAGCTTCAACTGGTTTGGAACAGTTGTTATAGACAAATGCTGTG  150

seq1  TAGTAGGCAGAGTGTTCATCGAAAATATGAGTTATTGTTGAGTGTGGTGG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGGCAGAGTGTTCATCGAAAATATGAGTTATTGTTGAGTGTGGTGG  200

seq1  TGTATGCTTATAATGTGAAATCTCGGGAGGGAAACTGAGGCAGGAGCATC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGCTTATAATGTGAAATCTCGGGAGGGAAACTGAGGCAGGAGCATC  250

seq1  GGGGAATGCAGGGTGAGATCCTGTCTCAAAAAATAAAAAAGAAGCTGGGC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAATGCAGGGTGAGATCCTGTCTCAAAAAATAAAAAAGAAGCTGGGC  300

seq1  GTGGTGGCGCACGCCTTTAATCCCAGCACTGGGGAGGCAGAGGCAGGCGG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGGCGCACGCCTTTAATCCCAGCACTGGGGAGGCAGAGGCAGGCGG  350

seq1  ATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGC  400

seq1  CAGGCGATACAGAGAAACACTGTCTCAAAAAAAAAAAAAAAAGAACAAAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCGATACAGAGAAACACTGTCTCAAAAAAAAAAAAAAAAGAACAAAA  450

seq1  CCCCACAAAGAAACAAGAAATAGCAACAAGAGCTTGG  485
      |||||||||||||||||||||||||||||||||||||
seq2  CCCCACAAAGAAACAAGAAATAGCAACAAGAGCTTGG  487