BAC Information

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BAC

Clone NameB6Ng01-048L05
Chromosome10 (Build37)
Map Location 15,696,083 - 15,841,846
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC637043, LOC100039492, LOC671439
Downstream geneLOC382457, LOC546472, LOC100039576, LOC627511
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-048L05.bB6Ng01-048L05.g
ACCDH873184DH873185
length1,0901,028
definitionDH873184|Mus musculus domesticus DNA, BAC clone: B6Ng01-048L05, 5' end.DH873185|Mus musculus domesticus DNA, BAC clone: B6Ng01-048L05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,840,748 - 15,841,846)(15,696,083 - 15,697,112)
sequence
gaattcaacaaggtgagagaatactgatgctagttatatgttgttaaaag
aaacattgacttcaaaatattactttcacaatataattctcaaataatgc
ctgtaagaatgataattttccctgtttatttataatgtatttattatatg
ttcctcatgtgtctgtattattttgaattcaaaaactttattacaacttt
tcaaactatgggtatcattattataaaaataataaacaatgtaaagaagt
taagtatcttctaattaccccatagccttaattcctgttgttgataggac
agacaaagtatcttagaacaagaacagacagatttaggggaaaaaaaaac
tgtagtagtaaaataaataaatcctggaggctgtgtgttccttgctatgt
gccccaatattttggattctggaatgaaacacacacacacacacacacac
acacataaacactttatattttgatatgtcttaattggctcaatgtctgg
gccacttcctaacctccatgtggttaatccacccccaccaataatcttga
attattacttactaaatcttgcattctatcttggttgttctggacccaga
gtgatccctagctgggccacactctcctggctccttcacatgtccactat
gccttcctgtcctatactcaggaacaacagatctcctctgccaaatctcc
ttccctttcctccctctctatccctataccaggatcacgaaaaaaaaaaa
aaaaaaaagtctcacctctgtctgccctgcccagccatgggctgtcagca
tctttatttaccaatcagaaccaactggagactggctttctgagtgtctt
atgtgtggactctagtgtgagcagtttcggggacccaaattaacataagg
ttataagcatctacaactaactttcccagatctcagttattataaaacac
aaataacatgccttcatacctttaaacgtctgcttttctattacttactt
ttagcagtgaatgaggagtctaatccagatgccccttgttggaggtagca
agccttttatactggagctcccctccaccttccagcattt
gaattcttagtcattcattcagagtgtcaatacctttctgtgatcttcaa
tttagtagtaatcaaccattatgtaatgctacaactataaaaattttgac
atgtgtattgttatcattttgtcaatgtatgtgtattctacatatcaata
taatgagattccccactgacagccttgtgccaggaagtcctgttcaaaat
accatcttatcagcaggagcaactccaccaagaaatgttgactgttgaat
tacccagaatgaggatttgaggcagaatttgaaacttagaatcattttat
agaagaaaactacagcctatcattctgggacatagcaacaaagagaatgt
ctatatagaatctggcctgaaattctttgccaccttgagaagaacaacca
aaccaaattgtcttttggaattattgcatggtaaatcaaaatggttgaac
ttctaatatttgggtaccttaatcattagaaataggttgccactgaagtt
cagggatgtaggcagtaccatgcaaatgagatgagcttttaagaggctag
tacactgacagcactcccagaacctaggacaatctgtatttctttgagaa
atattcactatgggtataatgggtataatggtttccattaagctaattaa
atagttttctctaattttaatagcactctacatgcaagatcccatttaag
taatgtcatgttatattacttatgtttaatcatattctgcttattattat
ggtttaatttttatgtgatttaataaaccaagccaatacctgtatagtac
atcaaagagaaaaaatctttatattaatcaaattaaatcattccaatcaa
aattattatcaaaacagctttgacttaccagtttgtatgaagattatatt
ttgtttgggctttaaactgttgtgtgaaacatgttcctgtttttgaatta
ggtgatcttacttacatggaatgtcaacctaatttgggaccacttgatat
aaactctagctcataagacaatttctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_15840748_15841846
seq2: B6Ng01-048L05.b_45_1134 (reverse)

seq1  AAATGGCTGGAAGGTGGAGTGGAGCT-CAGTAGTAAAGAGCTTGCTTACC  49
      |||| |||||||||||||| |||||| ||||| ||||  |||||| ||||
seq2  AAAT-GCTGGAAGGTGGAGGGGAGCTCCAGTA-TAAAAGGCTTGC-TACC  47

seq1  TCAAACAAGGGGCATCTGGATTAGACTCCTCATTTCACTGCTAAAAGTAA  99
      || ||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TCCAACAAGGGGCATCTGGATTAGACTCCTCA-TTCACTGCTAAAAGTAA  96

seq1  GTAAATAGAAAAGCAAGACGTTTAAAGGTATGAAGGCATTGTTATTTGTG  149
      || ||||||||||| ||||||||||||||||||||||| |||||||||||
seq2  GT-AATAGAAAAGC-AGACGTTTAAAGGTATGAAGGCA-TGTTATTTGTG  143

seq1  TTTTATAATAACTGAGATCTGGGAAAGTTAGTTGTAGATGCTTATAACCT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATAATAACTGAGATCTGGGAAAGTTAGTTGTAGATGCTTATAACCT  193

seq1  TATGTTAATTTGGGTCCCCGAAACTGCTCACACTAGAGTCCACACATAAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTAATTTGGGTCCCCGAAACTGCTCACACTAGAGTCCACACATAAG  243

seq1  ACACTCAGAAAGCCAGTCTCCAGTTGGTTCTGATTGGTAAATAAAGATGC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCAGAAAGCCAGTCTCCAGTTGGTTCTGATTGGTAAATAAAGATGC  293

seq1  TGACAGCCCATGGCTGGGCAGGGCAGACAGAGGTGAGACTTTTTTTTTTT  349
      |||||||||||||||||||||||||||||||||||||||   ||||||||
seq2  TGACAGCCCATGGCTGGGCAGGGCAGACAGAGGTGAGAC---TTTTTTTT  340

seq1  TTTTTTTTTTTCGTGATCCTGGTATAGGGATAGAGAGGGAGGAAAGGGAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTCGTGATCCTGGTATAGGGATAGAGAGGGAGGAAAGGGAA  390

seq1  GGAGATTTGGCAGAGGAGATCTGTTGTTCCTGAGTATAGGACAGGAAGGC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGATTTGGCAGAGGAGATCTGTTGTTCCTGAGTATAGGACAGGAAGGC  440

seq1  ATAGTGGACATGTGAAGGAGCCAGGAGAGTGTGGCCCAGCTAGGGATCAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGGACATGTGAAGGAGCCAGGAGAGTGTGGCCCAGCTAGGGATCAC  490

seq1  TCTGGGTCCAGAACAACCAAGATAGAATGCAAGATTTAGTAAGTAATAAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGTCCAGAACAACCAAGATAGAATGCAAGATTTAGTAAGTAATAAT  540

seq1  TCAAGATTATTGGTGGGGGTGGATTAACCACATGGAGGTTAGGAAGTGGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGATTATTGGTGGGGGTGGATTAACCACATGGAGGTTAGGAAGTGGC  590

seq1  CCAGACATTGAGCCAATTAAGACATATCAAAATATAAAGTGTTTATGTGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACATTGAGCCAATTAAGACATATCAAAATATAAAGTGTTTATGTGT  640

seq1  GTGTGTGTGTGTGTGTGTGTGTTTCATTCCAGAATCCAAAATATTGGGGC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTTTCATTCCAGAATCCAAAATATTGGGGC  690

seq1  ACATAGCAAGGAACACACAGCCTCCAGGATTTATTTATTTTACTACTACA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGCAAGGAACACACAGCCTCCAGGATTTATTTATTTTACTACTACA  740

seq1  GTTTTTTTTTCCCCTAAATCTGTCTGTTCTTGTTCTAAGATACTTTGTCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTTTTCCCCTAAATCTGTCTGTTCTTGTTCTAAGATACTTTGTCT  790

seq1  GTCCTATCAACAACAGGAATTAAGGCTATGGGGTAATTAGAAGATACTTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTATCAACAACAGGAATTAAGGCTATGGGGTAATTAGAAGATACTTA  840

seq1  ACTTCTTTACATTGTTTATTATTTTTATAATAATGATACCCATAGTTTGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTTTACATTGTTTATTATTTTTATAATAATGATACCCATAGTTTGA  890

seq1  AAAGTTGTAATAAAGTTTTTGAATTCAAAATAATACAGACACATGAGGAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTGTAATAAAGTTTTTGAATTCAAAATAATACAGACACATGAGGAA  940

seq1  CATATAATAAATACATTATAAATAAACAGGGAAAATTATCATTCTTACAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAATAAATACATTATAAATAAACAGGGAAAATTATCATTCTTACAG  990

seq1  GCATTATTTGAGAATTATATTGTGAAAGTAATATTTTGAAGTCAATGTTT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTATTTGAGAATTATATTGTGAAAGTAATATTTTGAAGTCAATGTTT  1040

seq1  CTTTTAACAACATATAACTAGCATCAGTATTCTCTCACCTTGTTGAATTC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAACAACATATAACTAGCATCAGTATTCTCTCACCTTGTTGAATTC  1090

seq1: chr10_15696083_15697112
seq2: B6Ng01-048L05.g_64_1091

seq1  GAATTCTTAGTCATTCATTCAGAGTGTCAATACCTTTCTGTGATCTTCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGTCATTCATTCAGAGTGTCAATACCTTTCTGTGATCTTCAA  50

seq1  TTTAGTAGTAATCAACCATTATGTAATGCTACAACTATAAAAATTTTGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTAGTAATCAACCATTATGTAATGCTACAACTATAAAAATTTTGAC  100

seq1  ATGTGTATTGTTATCATTTTGTCAATGTATGTGTATTCTACATATCAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTATTGTTATCATTTTGTCAATGTATGTGTATTCTACATATCAATA  150

seq1  TAATGAGATTCCCCACTGACAGCCTTGTGCCAGGAAGTCCTGTTCAAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAGATTCCCCACTGACAGCCTTGTGCCAGGAAGTCCTGTTCAAAAT  200

seq1  ACCATCTTATCAGCAGGAGCAACTCCACCAAGAAATGTTGACTGTTGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCTTATCAGCAGGAGCAACTCCACCAAGAAATGTTGACTGTTGAAT  250

seq1  TACCCAGAATGAGGATTTGAGGCAGAATTTGAAACTTAGAATCATTTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCAGAATGAGGATTTGAGGCAGAATTTGAAACTTAGAATCATTTTAT  300

seq1  AGAAGAAAACTACAGCCTATCATTCTGGGACATAGCAACAAAGAGAATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAAACTACAGCCTATCATTCTGGGACATAGCAACAAAGAGAATGT  350

seq1  CTATATAGAATCTGGCCTGAAATTCTTTGCCACCTTGAGAAGAACAACCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATAGAATCTGGCCTGAAATTCTTTGCCACCTTGAGAAGAACAACCA  400

seq1  AACCAAATTGTCTTTTGGAATTATTGCATGGTAAATCAAAATGGTTGAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAATTGTCTTTTGGAATTATTGCATGGTAAATCAAAATGGTTGAAC  450

seq1  TTCTAATATTTGGGTACCTTAATCATTAGAAATAGGTTGCCACTGAAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAATATTTGGGTACCTTAATCATTAGAAATAGGTTGCCACTGAAGTT  500

seq1  CAGGGATGTAGGCAGTACCATGCAAATGAGATGAGCTTTTAAGAGGCTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGATGTAGGCAGTACCATGCAAATGAGATGAGCTTTTAAGAGGCTAG  550

seq1  TACACTGACAGCACTCCCAGAACCTAGGACAATCTGTATTTCTTTGAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTGACAGCACTCCCAGAACCTAGGACAATCTGTATTTCTTTGAGAA  600

seq1  ATATTCACTATGGGTATAATGGGTATAATGGTTTCCATTAAGCTAATTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCACTATGGGTATAATGGGTATAATGGTTTCCATTAAGCTAATTAA  650

seq1  ATAGTTTTCTCTAATTTTAATAGCACTCTACATGCAAGATCCCATTTAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTTTCTCTAATTTTAATAGCACTCTACATGCAAGATCCCATTTAAG  700

seq1  TAATGTCATGTTATATTTACTTATGTTTAATCATATTCTGCTTATTATTA  750
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TAATGTCATGTTATA-TTACTTATGTTTAATCATATTCTGCTTATTATTA  749

seq1  TGGTTTAATTTTTATGTGATTTAATAAACCAAGCCAATACCTGTATAGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTAATTTTTATGTGATTTAATAAACCAAGCCAATACCTGTATAGTA  799

seq1  CATCAAAGAGGAAAAAATCTTTATATTAATCAAAATAAATCATTCAAATC  850
      ||||||||| |||||||||||||||||||||||| |||||||||| ||||
seq2  CATCAAAGA-GAAAAAATCTTTATATTAATCAAATTAAATCATTCCAATC  848

seq1  AAAAATTAATATCAAAACAGCTTTGACTGA-CAGTTTGTATGAAGA-TAT  898
       ||||||| ||||||||||||||||||| | ||||||||||||||| |||
seq2  -AAAATTATTATCAAAACAGCTTTGACTTACCAGTTTGTATGAAGATTAT  897

seq1  ATTTTG-TTGGGCTTTAAACTGTTGTGTGAAACATGTT-CTGTTTTGATA  946
      |||||| ||||||||||||||||||||||||||||||| |||||||   |
seq2  ATTTTGTTTGGGCTTTAAACTGTTGTGTGAAACATGTTCCTGTTTTTGAA  947

seq1  TTA-GTGATCTTACTTACATGGAATGTTAAACCTAATGTGTGA-CACTTG  994
      ||| |||||||||||||||||||||| | |||||||| || || ||||||
seq2  TTAGGTGATCTTACTTACATGGAATG-TCAACCTAATTTGGGACCACTTG  996

seq1  ATATTAAACTCTAGCTCATAAGAACAAATTTTCTCT  1030
      ||| |||||||||||||||||| ||||  |||||||
seq2  ATA-TAAACTCTAGCTCATAAG-ACAA--TTTCTCT  1028