BAC Information

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BAC

Clone NameB6Ng01-048L12
Chromosome10 (Build37)
Map Location 128,729,832 - 128,730,926
singlet/doubletsinglet
Overlap geneLOC544749
Upstream geneStat2, Il23a, Usp52, Tmem4, Cs, Coq10a, Ankrd52, Slc39a5, Obfc2b, Rnf41, Smarcc2, Myl6, Myl6b, Mbc2, Zc3h10, Rpl41, LOC668453, Pa2g4, Erbb3, LOC100043114, LOC668459, Rps26, Ikzf4, Suox, EG622589, Rab5b, Cdk2, Si, Dgka, LOC100043669, Wibg, LOC622655, Mmp19, 1110012D08Rik, Dnajc14, Ormdl2, 1110005A23Rik, Gdf11, Cd63, Rdh5, Bloc1s1, Itga7, Mettl7b, Olfr9, Olfr763, EG622733, EG546487, Olfr765, Olfr768, Olfr769, Olfr770, Olfr771, Olfr772, Olfr773-ps1, LOC624925, Olfr774, Olfr1518, Olfr776, Olfr777, Olfr778-ps1
Downstream geneOlfr780, Olfr781, Olfr782, Olfr783-ps1, Olfr784, EG546488, Olfr786, Olfr787, Olfr788, Olfr789-ps1, Olfr790, Olfr791, Olfr792, GA_x5J8B7W6HFP-3168293-3169194, Olfr794, GA_x5J8B7W6HFP-3198834-3199739, Olfr796, GA_x5J8B7W6HFP-3231749-3230798, Olfr798, Olfr799, Olfr800, Smt3h2-ps3, Olfr801, Olfr802, Olfr803, Olfr804, Olfr805, Olfr806, Olfr807, Olfr808, Olfr809, Olfr810, Olfr811, Olfr812, Olfr813, Olfr814, Olfr815, Olfr816, Olfr1544-ps1, Olfr817-ps1, Olfr818, LOC100043200, Olfr247, LOC100043203, Olfr820, Olfr821, Olfr822, Olfr1542-ps1, Olfr823, LOC382471, Olfr824, LOC672405, Olfr825, Olfr826, Olfr827, Neurod4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-048L12.bB6Ng01-048L12.g
ACCDH873194DH873195
length1,068905
definitionDH873194|Mus musculus domesticus DNA, BAC clone: B6Ng01-048L12, 5' end.DH873195|Mus musculus domesticus DNA, BAC clone: B6Ng01-048L12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtggagtctgataaatagaaaatttaaaaatctcaaaagaatt
cctgtggtggctcttaacactttccaagcagtgaaacctatgccaaacca
attctttgctttatttggaagagctgagatagtcattcactatgtggcag
gttgaatgtggtaggtgagttgagtggttttcagactaacagcaactcag
gtggaatttcaggcacaatacaagcctgattcctccttattacttatgca
gaaatctttataatacccataagagttttaaatctgtataaaaggtaata
tccaacctgatatattttcttgaaagatgatctgattatatgttgtacct
gagttatttatttactctttgaatatttattgtgggttcactatgtgtgt
gcaagaggacctggcacagagaagaagaaaaactttagtataatatttgg
ggagattttacattcccttaaggaataccttaatcaatcaattataaaat
aaacacatttgatgcattcttcatccagcttagagatggagagagatgag
taaagtcatacatatcagatgtagtttcactttgcaaacttctacaggaa
aaaaaaaaatcttccgtgaagaaactgggaagcaaaagaaggaagaatat
aatctagtgttaattaaatagtttagatcctatttaagaaattcagattt
aatgggctgaggtttgccagaaaggctatataagaaacactgtaattgaa
gaacctggagactttgaactatcatagtagttggagtttaattccagtat
ggcaaatgtcaaatggctatagagtaccttcttaatatctgaaataatag
tggcttttctatcaataattgatccccacatgttattgacatggaagata
tcataatacattaaatgtgaaagcaagttatagaataaccaatattacct
atgacctagtcggataaaccatatgctgaatggaaatactagatgtcact
gtgatttctaattgtgcaggttatgctgatttaataaaacatttcatcaa
aaatctgtggcatgatcc
gaattccttctttatgtcctctaccatcatcatgagatatgcttttaaat
ccaggtctaccttttcaggtgtgttagggtgtcctggattgggcgaagtg
ggcgttctgggttctgatgatggtgagtggtcctggcttctgttagtagg
attcttacgtttacctttcgccatctggcaatctctggagttagttgtta
tagttgtctttgttaagagattgttcctctgttgattttgttaccctcta
tcagcaggcgtgggagacaagctctcttctctgagtttcagtggtcagag
cagtctctgtaggcaagctctcctctttcagggaaggtgtacagttatct
ggtgtttgggcctcctcctggctgaaggtgaaggcccaaaacaggatctt
tcccagaagctgtgttgctttggccaggaaggtggccagttgtctggagt
tgaagatgtcgccgcctgagaagctctgtggctcttgtctggaaggaggc
cggccgtctggagctgaggatggcgctgcctcagaagctctgtggctctt
gccgggaaggtggctggttgtctggagctgaagatggcgccgcccagaag
ctctgcgactctcgcccgtcccagaaacggctggcactctgtattccaca
cggtcacccgtgcagcctgccctccgcggagtcccggagccaagaaggct
cccgccggcgcctgtgccacaaacctctcagccgggcagacccccgtgct
ctcaccaggaaggtggccgggctgtctcgattgttccaattctaagaagg
ggcaaagtggtccacactttggtctttgttcttcttcaggtttcttgtgt
ttgcaaattgtatcttatatctcgggaatactagtttctgggctaaaatc
cactt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_128729832_128730926
seq2: B6Ng01-048L12.b_45_1112 (reverse)

seq1  GGATCATGCCACAGGAATTTTTTTTGGATGAAAATGTTTTTAATTAAAAT  50
      ||||||||||||||  ||||||    |||| |||||||||  ||| ||||
seq2  GGATCATGCCACAG--ATTTTT----GATG-AAATGTTTT--ATT-AAAT  40

seq1  CAGCATATACTTGCAACATATAGAAAATCACCAGTGACATTCTAGTAATT  100
      ||||||| || ||| |||  ||| |||||| |||||||| |||||||  |
seq2  CAGCATA-ACCTGC-ACAATTAG-AAATCA-CAGTGACA-TCTAGTA--T  83

seq1  TTCCATATACAGCATATGTTTTAATTCTGACTAGGTTCATAGTATATATT  150
      ||||  || ||||||||| ||||  || ||||||| ||||||   |||||
seq2  TTCC--ATTCAGCATATGGTTTA--TCCGACTAGG-TCATAGGTAATATT  128

seq1  -GTTATTCTATAACCTGCTTTTCACATTTAATGTATTATGAATATCTTTC  199
       ||||||||||||| ||| ||||||||||||||||||||| ||||| |||
seq2  GGTTATTCTATAACTTGC-TTTCACATTTAATGTATTATG-ATATC-TTC  175

seq1  CATGTCAATAAACATTGTGAGATCAATATATTTGATAG-AAAGCCACTTA  248
      ||||||||| |||||   | ||||||| || ||||||| |||||||| ||
seq2  CATGTCAAT-AACATGTGGGGATCAAT-TA-TTGATAGAAAAGCCAC-TA  221

seq1  TTATTTCAGATATTAAGAGGTTACTCTATAGCCATTTGACATTTGCCATA  298
      |||||||||||||||||| | |||||||||||||||||||||||||||||
seq2  TTATTTCAGATATTAAGAAGGTACTCTATAGCCATTTGACATTTGCCATA  271

seq1  CTGGAATTAAACTCCAACTACTATGATAGTTCAAAGTCTCCAGGTTCTTC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAATTAAACTCCAACTACTATGATAGTTCAAAGTCTCCAGGTTCTTC  321

seq1  AATTACAGTGTTTCTTATATAGCCTTTCTGGCAAACCTCAGCCCATTAAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACAGTGTTTCTTATATAGCCTTTCTGGCAAACCTCAGCCCATTAAA  371

seq1  TCTGAATTTCTTAAATAGGATCTAAACTATTTAATTAACACTAGATTATA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAATTTCTTAAATAGGATCTAAACTATTTAATTAACACTAGATTATA  421

seq1  TTCTTCCTTCTTTTGCTTCCCAGTTTCTTCACGGAAGATTTTTTTTTTTC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCTTCTTTTGCTTCCCAGTTTCTTCACGGAAGATTTTTTTTTTTC  471

seq1  CTGTAGAAGTTTGCAAAGTGAAACTACATCTGATATGTATGACTTTACTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGAAGTTTGCAAAGTGAAACTACATCTGATATGTATGACTTTACTC  521

seq1  ATCTCTCTCCATCTCTAAGCTGGATGAAGAATGCATCAAATGTGTTTATT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTCTCCATCTCTAAGCTGGATGAAGAATGCATCAAATGTGTTTATT  571

seq1  TTATAATTGATTGATTAAGGTATTCCTTAAGGGAATGTAAAATCTCCCCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAATTGATTGATTAAGGTATTCCTTAAGGGAATGTAAAATCTCCCCA  621

seq1  AATATTATACTAAAGTTTTTCTTCTTCTCTGTGCCAGGTCCTCTTGCACA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTATACTAAAGTTTTTCTTCTTCTCTGTGCCAGGTCCTCTTGCACA  671

seq1  CACATAGTGAACCCACAATAAATATTCAAAGAGTAAATAAATAACTCAGG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAGTGAACCCACAATAAATATTCAAAGAGTAAATAAATAACTCAGG  721

seq1  TACAACATATAATCAGATCATCTTTCAAGAAAATATATCAGGTTGGATAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACATATAATCAGATCATCTTTCAAGAAAATATATCAGGTTGGATAT  771

seq1  TACCTTTTATACAGATTTAAAACTCTTATGGGTATTATAAAGATTTCTGC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTTTATACAGATTTAAAACTCTTATGGGTATTATAAAGATTTCTGC  821

seq1  ATAAGTAATAAGGAGGAATCAGGCTTGTATTGTGCCTGAAATTCCACCTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTAATAAGGAGGAATCAGGCTTGTATTGTGCCTGAAATTCCACCTG  871

seq1  AGTTGCTGTTAGTCTGAAAACCACTCAACTCACCTACCACATTCAACCTG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGCTGTTAGTCTGAAAACCACTCAACTCACCTACCACATTCAACCTG  921

seq1  CCACATAGTGAATGACTATCTCAGCTCTTCCAAATAAAGCAAAGAATTGG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATAGTGAATGACTATCTCAGCTCTTCCAAATAAAGCAAAGAATTGG  971

seq1  TTTGGCATAGGTTTCACTGCTTGGAAAGTGTTAAGAGCCACCACAGGAAT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCATAGGTTTCACTGCTTGGAAAGTGTTAAGAGCCACCACAGGAAT  1021

seq1  TCTTTTGAGATTTTTAAATTTTCTATTTATCAGACTCCACAGAATTC  1095
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGAGATTTTTAAATTTTCTATTTATCAGACTCCACAGAATTC  1068