BAC Information

Click to search

BAC

Clone NameB6Ng01-049G01
Chromosome10 (Build37)
Map Location 89,867,971 - 89,985,750
singlet/doubletdoublet
Overlap geneAnks1b
Upstream geneGas2l3, Nr1h4, EG627532, Slc17a8, Scyl2, Actr6, E030041M21Rik, E530015N03Rik, LOC100043039, LOC544719
Downstream geneApaf1, 1200009F10Rik, Slc25a3, Tmpo, LOC100041769
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-049G01.bB6Ng01-049G01.g
ACCDH873658DH873659
length8501,004
definitionDH873658|Mus musculus domesticus DNA, BAC clone: B6Ng01-049G01, 5' end.DH873659|Mus musculus domesticus DNA, BAC clone: B6Ng01-049G01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(89,985,091 - 89,985,750)(89,867,971 - 89,869,009)
sequence
gaattcaaatctaataaaaaaagcacttgattatgtagtcattaacagga
ttcaaatatcaaataattatcaaattactggcactgacagctgtagaatt
ttgttaaaacatgaatgtttaactctcatgcatgtgggtctctgtcatca
catttgtttagtaaattggcagacatttcttctttattgaataatttaga
cgataaagtaatgcatattctctgtaaaaattttaaaaagtttagatgat
ggcaaaatataaaaatcacaggcaatcttatgaagagacagcaaccactg
atgcttttacatatgtccatgttgacctctgactgttggaagaatactgt
atgtcttcaagtcatttctacttttacttcttattttgctaatacaaagt
caacaattgcagcttttataaaataggcaatatactaaaattctctgaaa
cctcttgagccagagtttaattcacctggacagagtctaagctcccagag
cttaaacctccctcagtactgatttcttccatattcctactaagatggcc
cattaagccccagttagataaggcattctactgttttccaaatccaaatc
ctgaaatccacattcctccaaagaaaagcatggtcatgcctatgacagca
ataccctagtccctggtagcaacttctgtcttagtttgggttatactgct
gtgagagagagaccatgaccaaagtaactcttacaaaagaacagcattga
attggggatggcttacagttttagaggttcaatgcattatcatcatggca
gaagcatgaagcatccaggcagacttggtatcagagagctacgtgatcta

gaattcaaagaccttaccaaatatgaacctgtaatgaattaaacatatca
tttaaattatggtgctagacgagtatagaaatgtatggattttaatagac
ttcaagaactttaactcaatataaaagaattaatagtttataaagtttaa
gcatatcaggggaagaataaatgattgaacaaataatattgaaaatactc
aataggttcaaaaagtaaaatacattctataagatcaaggagccaagctc
cattttggctttcatatggtacaagatttctaataagatgcagttattca
caaggaaggaacaaactgcatcgtactataattgtgagaatatggagtag
catctgaaaatgaaaggcagtgacattcagccatttagcaagtaattatt
catttggctcccaagagcagataccacatatgtcagtagaaaattggtca
aggaagatggacaatctgaagaatatatacaactggaaaagcacgcttca
tttactagtgaatgaaatatgagctggaagagcaatgcagtttcatgtat
tattaaaatgtggggaaaattaacttatagcatcaagtgcctagtgttgt
taggctaagaagagcattttgtcaagcactgtggttagaaaatgaattcc
tgtgttccgaagtatgttaagatctttaaagcatcaagagtcttgagctg
ttaagagcaccgactgctcttccaaaggttctacttcaaatcccagcaac
cacatggtggctcacagccatccgtaacgaatatgatgccctcttctgga
gtgtctgaagacagctacagtgtacttacatatattaataaatctttcaa
aaaaaagaatctacacataggtcatctgtcattactacatatttacagta
ctagaatatgagatttagttatatctctgttagtcaggttctctagagtc
acagacttatggtagtctcttatataggaattgttgatgacctacagtgt
agtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_89985091_89985750
seq2: B6Ng01-049G01.b_47_705 (reverse)

seq1  CTAGGGTATTGCTGTCATAGGCATGACCATGCTTTTCTTTGGAGGAATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGTATTGCTGTCATAGGCATGACCATGCTTTTCTTTGGAGGAATGT  50

seq1  GGATTTCAGGATTTTGGATTTGGAAAACAGTAGAATGCCTTATCTAACTG  100
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GGATTTCAGGA-TTTGGATTTGGAAAACAGTAGAATGCCTTATCTAACTG  99

seq1  GGGCTTAATGGGCCATCTTAGTAGGAATATGGAAGAAATCAGTACTGAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTAATGGGCCATCTTAGTAGGAATATGGAAGAAATCAGTACTGAGG  149

seq1  GAGGTTTAAGCTCTGGGAGCTTAGACTCTGTCCAGGTGAATTAAACTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTTAAGCTCTGGGAGCTTAGACTCTGTCCAGGTGAATTAAACTCTG  199

seq1  GCTCAAGAGGTTTCAGAGAATTTTAGTATATTGCCTATTTTATAAAAGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAAGAGGTTTCAGAGAATTTTAGTATATTGCCTATTTTATAAAAGCT  249

seq1  GCAATTGTTGACTTTGTATTAGCAAAATAAGAAGTAAAAGTAGAAATGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATTGTTGACTTTGTATTAGCAAAATAAGAAGTAAAAGTAGAAATGAC  299

seq1  TTGAAGACATACAGTATTCTTCCAACAGTCAGAGGTCAACATGGACATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGACATACAGTATTCTTCCAACAGTCAGAGGTCAACATGGACATAT  349

seq1  GTAAAAGCATCAGTGGTTGCTGTCTCTTCATAAGATTGCCTGTGATTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAGCATCAGTGGTTGCTGTCTCTTCATAAGATTGCCTGTGATTTTT  399

seq1  ATATTTTGCCATCATCTAAACTTTTTAAAATTTTTACAGAGAATATGCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTGCCATCATCTAAACTTTTTAAAATTTTTACAGAGAATATGCAT  449

seq1  TACTTTATCGTCTAAATTATTCAATAAAGAAGAAATGTCTGCCAATTTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTATCGTCTAAATTATTCAATAAAGAAGAAATGTCTGCCAATTTAC  499

seq1  TAAACAAATGTGATGACAGAGACCCACATGCATGAGAGTTAAACATTCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAAATGTGATGACAGAGACCCACATGCATGAGAGTTAAACATTCAT  549

seq1  GTTTTAACAAAATTCTACAGCTGTCAGTGCCAGTAATTTGATAATTATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAACAAAATTCTACAGCTGTCAGTGCCAGTAATTTGATAATTATTT  599

seq1  GATATTTGAATCCTGTTAATGACTACATAATCAAGTGCTTTTTTTATTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTTGAATCCTGTTAATGACTACATAATCAAGTGCTTTTTTTATTAG  649

seq1  ATTTGAATTC  660
      ||||||||||
seq2  ATTTGAATTC  659

seq1: chr10_89867971_89869009
seq2: B6Ng01-049G01.g_65_1068

seq1  GAATTCAAAGACCTTACCAAATATGAACCTGTAATGAATTAAACATATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGACCTTACCAAATATGAACCTGTAATGAATTAAACATATCA  50

seq1  TTTAAATTATGGTGCTAGACGAGTATAGAAATGTATGGATTTTAATAGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATTATGGTGCTAGACGAGTATAGAAATGTATGGATTTTAATAGAC  100

seq1  TTCAAGAACTTTAACTCAATATAAAAGAATTAATAGTTTATAAAGTTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGAACTTTAACTCAATATAAAAGAATTAATAGTTTATAAAGTTTAA  150

seq1  GCATATCAGGGGAAGAATAAATGATTGAACAAATAATATTGAAAATACTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATCAGGGGAAGAATAAATGATTGAACAAATAATATTGAAAATACTC  200

seq1  AATAGGTTCAAAAAGTAAAATACATTCTATAAGATCAAGGAGCCAAGCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGTTCAAAAAGTAAAATACATTCTATAAGATCAAGGAGCCAAGCTC  250

seq1  CATTTTGGCTTTCATATGGTACAAGATTTCTAATAAGATGCAGTTATTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTGGCTTTCATATGGTACAAGATTTCTAATAAGATGCAGTTATTCA  300

seq1  CAAGGAAGGAACAAACTGCATCGTACTATAATTGTGAGAATATGGAGTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAAGGAACAAACTGCATCGTACTATAATTGTGAGAATATGGAGTAG  350

seq1  CATCTGAAAATGAAAGGCAGTGACATTCAGCCATTTAGCAAGTAATTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGAAAATGAAAGGCAGTGACATTCAGCCATTTAGCAAGTAATTATT  400

seq1  CATTTGGCTCCCAAGAGCAGATACCACATATGTCAGTAGAAAATTGGTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGGCTCCCAAGAGCAGATACCACATATGTCAGTAGAAAATTGGTCA  450

seq1  AGGAAGATGGACAATCTGAAGAATATATACAACTGGAAAAGCACGCTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGATGGACAATCTGAAGAATATATACAACTGGAAAAGCACGCTTCA  500

seq1  TTTACTAGTGAATGAAATATGAGCTGGAAGAGCAATGCAGTTTCATGTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTAGTGAATGAAATATGAGCTGGAAGAGCAATGCAGTTTCATGTAT  550

seq1  TATTAAAATGTGGGGAAAATTAACTTATAGCATCAAGTGCCTAGTGTTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAAATGTGGGGAAAATTAACTTATAGCATCAAGTGCCTAGTGTTGT  600

seq1  TAGGCTAAGAAGAGCATTTTGTCAAGCACTGTGGTTAGAAAATGAATTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTAAGAAGAGCATTTTGTCAAGCACTGTGGTTAGAAAATGAATTCC  650

seq1  TGTGTTCCGAAGTATGTTAAGATCTTTAAAGCATCAAGAGTCTTGAGCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTCCGAAGTATGTTAAGATCTTTAAAGCATCAAGAGTCTTGAGCTG  700

seq1  TTAAGAGCACCGACTGCTCTTCCAAAGGTTCTACTTCAAATCCCAGCAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAGCACCGACTGCTCTTCCAAAGGTTCTACTTCAAATCCCAGCAAC  750

seq1  CACATGGTGGCTCACAGCCATCCGTAACGAAATATGATGCCCTCTTCTGG  800
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CACATGGTGGCTCACAGCCATCCGTAACG-AATATGATGCCCTCTTCTGG  799

seq1  AGTGTCTGAAGACAGCTACAGTGTACTTACATATAATTAATAAATCTTTA  850
      |||||||||||||||||||||||||||||||||| |||||||||||||| 
seq2  AGTGTCTGAAGACAGCTACAGTGTACTTACATAT-ATTAATAAATCTTT-  847

seq1  AAAAAAAAAGAAATTCTACACATAAGGGTTCATCCTGTCAATTTACTTAC  900
       |||||||||||  ||||||||||   | |||| ||||||  |||| |||
seq2  CAAAAAAAAGAA--TCTACACATA---GGTCAT-CTGTCA--TTAC-TAC  888

seq1  AATTAATTTACAAGTTACCTTAG-ATATGGAAGGATTTTAGGTTATATCT  949
      |    |||||||   |||  ||| |||||    |||||   |||||||||
seq2  A---TATTTACA--GTAC--TAGAATATG---AGATTT--AGTTATATCT  926

seq1  CTGTATTAGTCAGGGTTCTCTAGAGTCACAGAACTTATGGGTAGTCTCTT  999
      |||  ||||||| |||||||||||||||||| |||||| |||||||||||
seq2  CTG--TTAGTCA-GGTTCTCTAGAGTCACAG-ACTTAT-GGTAGTCTCTT  971

seq1  AATAATAAGGGAATTTGTTGATGACTTACAGTCTGTAGTC  1039
          |||  |||| ||||||||||| |||||  |||||||
seq2  ----ATATAGGAA-TTGTTGATGACCTACAG--TGTAGTC  1004