BAC Information

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BAC

Clone NameB6Ng01-049H15
Chromosome10 (Build37)
Map Location 115,451,939 - 115,598,736
singlet/doubletdoublet
Overlap genePtprr, 4933416C03Rik
Upstream geneTph2, Tbc1d15, LOC668041, Rab21, Tmem19, Thap2, Ccdc131, Lgr5, A930009A15Rik, LOC668071, EG668073, Tspan8
Downstream genePtprb, Kcnmb4, Cnot2, LOC668080, EG668091, Gm239, Rab3ip, D630029K05Rik, LOC544741, Best3, Lrrc10, Cct2, Frs2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-049H15.bB6Ng01-049H15.g
ACCDH873727DH873728
length235317
definitionDH873727|Mus musculus domesticus DNA, BAC clone: B6Ng01-049H15, 5' end.DH873728|Mus musculus domesticus DNA, BAC clone: B6Ng01-049H15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(115,451,939 - 115,452,173)(115,598,420 - 115,598,736)
sequence
atttgcttaagacagagattggcatgaaggaaggctttaaggaatgttat
ccatcactctgtccaaataatggaagcctaaataataagaaacccagtcg
atgaacctgatttgtccacttcaagtgctccaagaaggatgtcctaagtg
gatagtttcaactctgtatacccaggctaatgtggacgcttaccagaaga
gggtgtagagttagatgggagaggaggtagggaga
caagactgcctgtactacccagagaaaccctgtctttttttttttttttt
ttaatgttctcaaaagcccggacttttattgtaaatttattagtttgggt
acatttgaaagaatagtggacatggagaaaatcagagcaccatcgagttt
caaaaacttctatggcctccacctctaaaaaagaggtttctaacatgtgg
caaaaaatacccatatttaattacattttttccattttttattaggtatt
tagcttatttacatttccaatgctataccaaaaagggccaaaaagggagg
ggtgggtaggggagtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_115451939_115452173
seq2: B6Ng01-049H15.b_52_286

seq1  ATTTGCTTAAGACAGAGATTGGCATGAAGGAAGGCTTTAAGGAATGTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCTTAAGACAGAGATTGGCATGAAGGAAGGCTTTAAGGAATGTTAT  50

seq1  CCATCACTCTGTCCAAATAATGGAAGCCTAAATAATAAGAAACCCAGTCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCACTCTGTCCAAATAATGGAAGCCTAAATAATAAGAAACCCAGTCG  100

seq1  ATGAACCTGATTTGTCCACTTCAAGTGCTCCAAGAAGGATGTCCTAAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACCTGATTTGTCCACTTCAAGTGCTCCAAGAAGGATGTCCTAAGTG  150

seq1  GATAGTTTCAACTCTGTATACCCAGGCTAATGTGGACGCTTACCAGAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGTTTCAACTCTGTATACCCAGGCTAATGTGGACGCTTACCAGAAGA  200

seq1  GGGTGTAGAGTTAGATGGGAGAGGAGGTAGGGAGA  235
      |||||||||||||||||||||||||||||||||||
seq2  GGGTGTAGAGTTAGATGGGAGAGGAGGTAGGGAGA  235

seq1: chr10_115598420_115598736
seq2: B6Ng01-049H15.g_73_389 (reverse)

seq1  CCACTCCCCTACCCACCCCTCCCTTTTTGGCCCTTTTTGGTATAGCATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCCCCTACCCACCCCTCCCTTTTTGGCCCTTTTTGGTATAGCATTG  50

seq1  GAAATGTAAATAAGCTAAATACCTAATAAAAAATGGAAAAAATGTAATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGTAAATAAGCTAAATACCTAATAAAAAATGGAAAAAATGTAATTA  100

seq1  AATATGGGTATTTTTTGCCACATGTTAGAAACCTCTTTTTTAGAGGTGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGGGTATTTTTTGCCACATGTTAGAAACCTCTTTTTTAGAGGTGGA  150

seq1  GGCCATAGAAGTTTTTGAAACTCGATGGTGCTCTGATTTTCTCCATGTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATAGAAGTTTTTGAAACTCGATGGTGCTCTGATTTTCTCCATGTCC  200

seq1  ACTATTCTTTCAAATGTACCCAAACTAATAAATTTACAATAAAAGTCCGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTCTTTCAAATGTACCCAAACTAATAAATTTACAATAAAAGTCCGG  250

seq1  GCTTTTGAGAACATTAAAAAAAAAAAAAAAAAAGACAGGGTTTCTCTGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTGAGAACATTAAAAAAAAAAAAAAAAAAGACAGGGTTTCTCTGGG  300

seq1  TAGTACAGGCAGTCTTG  317
      |||||||||||||||||
seq2  TAGTACAGGCAGTCTTG  317