BAC Information

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BAC

Clone NameB6Ng01-049H18
Chromosome10 (Build37)
Map Location 104,053,601 - 104,054,363
singlet/doubletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-049H18.bB6Ng01-049H18.g
ACCDH873733DH873734
length8851,136
definitionDH873733|Mus musculus domesticus DNA, BAC clone: B6Ng01-049H18, 5' end.DH873734|Mus musculus domesticus DNA, BAC clone: B6Ng01-049H18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcaaaccaatcagaatggctaagatcaaaaattcaggtgacagc
agatgctggagaggatgtggagaaagaggaacattcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttccttg
gaaaattggacatggtactaccggaggatccagcaatacctctcctggac
atatatccagaagatgtccccatcggtaagaaggacacatgttccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccttcaacagaggaatagatacagaaaatgtggtacatttttttttta
agatttatttattggttatctgtaagtacactgtagctgacttcagacac
gccagaagagggagtcagatctcgttacagatggttgtgagccaccatgc
agttgctgggatttgaactccggaccttcagaagagcagtcgggtgctct
tacccactgagccatctcaccagcccacatttacacaatggagtactact
cagctattaaaaagaatgaatttatgaaattcctagccaaatggatggac
ctggagggcatcatcctgagtaaagtaacacaatcacaaaggaactcaca
caatatatactcactgataagtggatatagcccaaaacttagatacccaa
gatatagatacaatttgctaaatacatgaaactcaagaagaatgagcctg
aagtgtgtacaccatgccctccttagatggaacaa

gaattcttactgggcacaccccatatatctgccgggcaggattcagcctg
gtagcagtcattggaccacaatcttgtgtgtgtagaggagcaatttgagt
cccctgcagaactgttgaaatttgctccaggtccccaggcctgcacagag
gcctaggaggacaggttcttgcttttggataccagtgatgctgctggatg
tcctgggagagctgagactggtgtgtgggtccctggggttggctctagcc
cagggctgaaggaaaagtgcagaaggagggctctggcgtattactgtgag
gaggatagattttagcttgctctgttggctgcttgccttggtggagtcca
tgtctgggattgcagagaccccttttgttggaggttataatcacaacttt
ttagaggaagacctggcccactgctccagcacagcgaatctcactgaaaa
aaaaagggggggggaagtccttggatttggggcatttattgtagaaaggc
agaaaggagcagaaagtagggaagtagaggccagcatggacacatagaca
gatgggaaagggaatgctgggagagggaagcaaaacagcaagaataaaat
agtaagtctaagagagtaaaagaaagagagtaagagatggagaagggggc
aagcagcaccttttagatagggtcaggcctaccttggctgtttccaggta
aataaggagaggcataccttgctgttgacaggtaacagtggggtagcatc
cagacagaataccaggaccttgggaactgttctagtgactgatggccaca
gaattatggagtcttacctcctgtcagaagcctgctttctggaacatggc
aaacttccttcccttcctgcaagttatctgtggcatccagagtttgaacc
cagtccaccaagaacaggctgcctttcatagtcgacaccacagcgtgtga
atagtcggatgcgatatctgcacccaacaatgacgatcagctgtcccttt
gtgataggaacgctgtaattagagaggctgatcttggagactgataatct
atttattgtcccgtatcttataacctgatcacaatgactccctgcggatg
agagcccaaaaccctacgtagatgcccctagttaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053601_104054363
seq2: B6Ng01-049H18.b_44_784 (reverse)

seq1  CTTTGTGATTGGGTTACCGCACTCAGGATGATACTCTCCAGGTCCATCCA  50
      ||||||||||| |||||   |||||||||||| | |||||||||||||||
seq2  CTTTGTGATTGTGTTACTTTACTCAGGATGATGCCCTCCAGGTCCATCCA  50

seq1  TTTGCCTAGGAATTTCATAAATTCATTCTTTTTAATAGCTCCATTTACAT  100
      |||| |||||||||||||||||||||||||||||||||||  | |   | 
seq2  TTTGGCTAGGAATTTCATAAATTCATTCTTTTTAATAGCT-GAGTAGTAC  99

seq1  TTAATTTAATTAATGTAATTACAATTAATTAATTTATTAATTAAATAATT  150
      |  |||   | ||||                 |    |  | | ||   |
seq2  TCCATTGTGTAAATG-----------------TGGGCTGGTGAGATGGCT  132

seq1  TAATAATTTAATTGATAAATTAATTTAATTAATTAATTTAATTAATTAAA  200
       | |   | |   ||  |    | |    |  | ||  |    | || ||
seq2  CAGTGGGTAA---GAGCACCCGACTGCTCTTCTGAAGGTCCGGAGTTCAA  179

seq1  TTAAATAATAATTTAATAATAAATTAAATATTTTAAAATTAATAATAATT  250
       |    |  || |  ||  |   | | |      |  ||   |||  |  
seq2  AT-CCCAGCAACTGCATGGTGGCTCACA------ACCATCTGTAACGA-G  221

seq1  TTATAAGTAAATAAT-----TTAATTAATGTAATTTAATTAATGTAATTA  295
       | | | |   |  |      |   | | || |  ||   | |||| |||
seq2  ATCTGACTCCCTCTTCTGGCGTGTCTGAAGTCAGCTA--CAGTGTACTTA  269

seq1  C--ATTA-CATTTAATAGCTC-CATTGTGTAAATGTACCACATTTTCTGT  341
      |  || | || | ||||  ||  |      ||||||||||||||||||||
seq2  CAGATAACCAATAAATAAATCTTAAAAAAAAAATGTACCACATTTTCTGT  319

seq1  ATCTATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTCCTGGCTAT  391
      ||||||||||||||||| ||||||||||||||||||||||| ||||||||
seq2  ATCTATTCCTCTGTTGAAGGGCATCTGGGTTCTTTCCAGCTTCTGGCTAT  369

seq1  TATAAATAAGGCTGCTATGAATATAGTGGAGCATGTGTCCTTCTTACCGG  441
      ||||||||||||||||||||| |||||||| |||||||||||||||||| 
seq2  TATAAATAAGGCTGCTATGAACATAGTGGAACATGTGTCCTTCTTACCGA  419

seq1  TTGGGGCATCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATCCTCC  491
      | ||| ||||||||||||||||| |||| |||||||||||||||||||||
seq2  TGGGGACATCTTCTGGATATATGTCCAGGAGAGGTATTGCTGGATCCTCC  469

seq1  GGTAGTACTATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCCAGAG  541
      |||||||| |||||||||||||  | |||||||||||| |||||||||||
seq2  GGTAGTACCATGTCCAATTTTCCAAGGAACCGCCAGACTGATTTCCAGAG  519

seq1  TGGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTT  591
      ||||||||||||| |||||||||||||||||||||||| |||||||||||
seq2  TGGTTGTACAAGCTTGCAATCCCACCAACAATGGAGGAATGTTCCTCTTT  569

seq1  CTCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCC  641
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CTCCACATCCTCTCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCC  619

seq1  ATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTC  691
      ||||||| |||| |||||||||||||||||||||||||||||||||||||
seq2  ATTCTGATTGGTTTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTC  669

seq1  CCTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTC  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTC  719

seq1  GGTATTCCTCAGGTGAGAATTC  763
      ||||||||||||||||||||||
seq2  GGTATTCCTCAGGTGAGAATTC  741


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