BAC Information

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BAC

Clone NameB6Ng01-049O02
Chromosome15 (Build37)10 (Build37)
Map Location 56,830,891 - 56,830,958104,053,903 - 104,054,363
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneHba-ps3, Has2, EG594843, LOC435442, LOC100040067, LOC100039984
Downstream geneBC026439, Zhx2, Derl1, Wdr67, BC030396
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-049O02.bB6Ng01-049O02.g
ACCDH874007DH874008
length987916
definitionDH874007|Mus musculus domesticus DNA, BAC clone: B6Ng01-049O02, 5' end.DH874008|Mus musculus domesticus DNA, BAC clone: B6Ng01-049O02, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(56,830,891 - 56,830,958)(104,053,903 - 104,054,363)
sequence
gaattcttcactaaaaccatctggtcctgggcttttttaggttgggagac
tcttaatgactgcttctatttctttatgagttatgggactatttagatag
taaatgtggtcctgacttagttttggtacctggtatctgtttagaaaatc
atccatttcatctagattttccagttttattgaattttctaataggattt
gatgttttagaatttctgcagtttctattgttatttctcccatttaattt
ttgattctgttaatttggataatgtctctgtgctatttagttaattgggt
taagggtttaccaatcttgttgactttttcaaataaccaactctcagttt
tgttgattatattatatagttctctgtttctaattggttgatttcagctg
agtttttactattttctgctatccactcctttggggtgtattttcttcat
tttgttttagagctttcagatgtgctgttaagttgctagtgtatgatctc
ttcaatttcattatgtaggtactcagtgctatatgaattttcctctcagc
acttctttaattgtgtcccataagtttgggtatgctgtgccttcaatttt
ttttttaaagaaagtactctacccacttcattctatgaagccataattac
tctgatatctaaaccttacaaagacccaacaaagaaagagaactttagac
caatttcccttatgaatatccccatgcaaaatactcaaaaaattctcatg
aactgaatctaagaacacattaaaatgaacatccatcatgatcaattagg
cttcatcccagtgatgcagggattatttaatatatgcagatccatcaaca
taatccactatataaacaaatgcaaagacaaaagtcatctcgttacatgc
tgagaatcatttgataaaatccacacccattcatgataaagtctgaaaga
tcagaattcaaggcccatactaacataataaatcatt
gaattctcacctgaggaataccgaatgggtgagaagcacctgaaaaaatg
ctcagcatccttaataatcagagaaatgcaagtcaaaacaaccctgagat
tccaccgcacaccagtcagagtggctaagaacaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcgtgtacaaccactctggaaatcagtctggcgattcctca
gaaaattggacatagtactaccggaggatcctgcaatacctctcctggtc
atatatccagaagatgtcccaatcggtaagaaggacacatgctccactat
gtacatagcaggcttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatatacacagtg
gagtactactcagctattaaaaataatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcattctgagtgaggtaacacaatcacaaa
agaactcacatgatatgtactcactgataagtggatattagcccagaaac
ttagtatacctgagatataagatacaatttgcaaaacacatgaaactgac
aaagaatgaagaccaaagtgtggatgttgggagccgcgcccacattcgcc
gttacaagatggcgctgacagctgtgttctaagtggtaaacaaataatct
gcgcatgtgccaagggtatcttatgactacttgtgctctgccttccccgt
gacgtcaactcggccgatgggctgcagccaatcagggagtgacacgtccg
agcgaagagaatgcttctttagagggacggggtttcgtttctctctctct
ctgcttcttgctctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_56830891_56830958
seq2: B6Ng01-049O02.b_51_118 (reverse)

seq1  TAAAGAAATAGAAGCAGTGATTAATAGTCTCCCAACCAAAAAAAGCCCAG  50
      |||||||||||||||||| ||||| |||||||||||| ||||||||||||
seq2  TAAAGAAATAGAAGCAGTCATTAAGAGTCTCCCAACCTAAAAAAGCCCAG  50

seq1  GACCAGATATGTTTAGTG  68
      ||||||||   |||||||
seq2  GACCAGATGGTTTTAGTG  68

seq1: chr10_104053903_104054363
seq2: B6Ng01-049O02.g_67_537 (reverse)

seq1  TTTAATAG----------CTCCATTGTGTAAATGTACCACATTTTCTGTA  40
      ||||||||          ||||| |||||| |||||||||||||||||||
seq2  TTTAATAGCTGAGTAGTACTCCACTGTGTATATGTACCACATTTTCTGTA  50

seq1  TCTATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTCCTGGCTATT  90
      || ||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCTATT  100

seq1  ATAAATAAGGCTGCTATGAATATAGTGGAGCATGTGTCCTTCTTACCGGT  140
      ||||||||| |||||||| | ||||||||||||||||||||||||||| |
seq2  ATAAATAAGCCTGCTATGTACATAGTGGAGCATGTGTCCTTCTTACCGAT  150

seq1  TGGGGCATCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATCCTCCG  190
      |||| ||||||||||||||||| |||| ||||||||||| ||||||||||
seq2  TGGGACATCTTCTGGATATATGACCAGGAGAGGTATTGCAGGATCCTCCG  200

seq1  GTAGTACTATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCCAGAGT  240
      |||||||||||||||||||||||| ||| |||||||| ||||||||||||
seq2  GTAGTACTATGTCCAATTTTCTGAGGAATCGCCAGACTGATTTCCAGAGT  250

seq1  GGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTC  290
      ||||||||| || |||||||||||||||||||||||||||||||||||||
seq2  GGTTGTACACGCTTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTC  300

seq1  TCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  340
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGTTCTTAGCCA  350

seq1  TTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCC  390
       ||||||||||||| |||||||||||||||||||||||| ||||||||| 
seq2  CTCTGACTGGTGTGCGGTGGAATCTCAGGGTTGTTTTGACTTGCATTTCT  400

seq1  CTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCG  440
      ||||| |||||||||| ||| ||||||||||||||||||||  |||||||
seq2  CTGATTATTAAGGATGCTGAGCATTTTTTCAGGTGCTTCTCACCCATTCG  450

seq1  GTATTCCTCAGGTGAGAATTC  461
      |||||||||||||||||||||
seq2  GTATTCCTCAGGTGAGAATTC  471