BAC Information

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BAC

Clone NameB6Ng01-049O04
Chromosome10 (Build37)
Map Location 109,787,305 - 109,835,944
singlet/doubletdoublet
Overlap geneLOC100042506
Upstream geneNav3, LOC100042497, LOC100042502
Downstream geneLOC100042510, LOC667855, 9230102K24Rik, LOC100042518, E2f7, Csrp2, Zdhhc17, EG432502, LOC667904, Osbpl8, Bbs10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-049O04.bB6Ng01-049O04.g
ACCDH874011DH874012
length7571,125
definitionDH874011|Mus musculus domesticus DNA, BAC clone: B6Ng01-049O04, 5' end.DH874012|Mus musculus domesticus DNA, BAC clone: B6Ng01-049O04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(109,835,188 - 109,835,944)(109,787,305 - 109,788,462)
sequence
gaattccacccctataaaaattctttcttgtctctcacttagagtctttt
ctgagtgtcttgatgtatgtggtttctaaatgtactgtaaactttgaatg
ccagtgtgactcatgatagaagttgcctaaactaaaaggaacttttaatt
ttggactcccctcggtgatgcgtgggaagcagcatctggatgacccgagc
aagtcaaatgttgacaagccatgctctatccatcccataacatgcagaaa
atgtggtgcctccgcaagaaaaaatgttcagcaaggggaaaacactaagt
agcagttccttcagaaaatgttggcaagaggttactttgtaggtataatg
cagtcttgttgttctgacatgaaatacagaacctaaacatgtatcttcag
acactttactcttaaatattgatataattatcctcttggttgtggactct
gaggccctgtagtttgatgcattttcacatctgaatgcactcggcttgct
ctctgtggcagtttgcctgcacttacccatcctcctctctttctcctttc
atccatagtgctgagttggggcaatgataaaagggttgtagggctttttt
cttgttctcgttagatacctatcctgtgctgtgctgcgggttcccctgga
tgcacaatgcatttgaggtggaggtcctttacttgtaaggcatcattttc
tctacaatgggctaagcacagtgggaaagtcctgagttgggggtggggtg
ggtctgt
gaattccattaaccctttccaaactttatttccaggcttcttcagcttaa
tttgccgcaaagaatgaattaggtataagtgaaaactgaaaagagcggca
gtgtctggggcactggggcttaaaaatattagagatctagattcttaagg
ccagccaccagacccagagggagccaagtggaaattgtcattccagttct
gtgccttccctgggaaggatgaataaaagcccatgcccactctttctaaa
gttgcctttctaggtctgatcctgccagagtgggacacaaattaccttga
ctaatgttaatccttaagaccggtatacacatcaagcctgtaaaaattag
aaatatttttaaatcccataaagtggcttagctgccaggttttttatggt
tttttttttttttttaatgatagatctgagaactaattaactgcattata
ctatttaataagaggcaataattcaaaaataaagaagattcttcttactg
ttatcatgaatgaatctgcactagagttcagaaatctagatatagttaga
agaaaatatatgttagaaggtaattaatagttttaaacataagaacacag
aggataatcatcttactatatagtgagcttgctattaattaaatgaagct
ggacatcatggccagtatttgtgatcctagccttaggaggtaggggcaga
gggtccacaagttcgagggcagcctcagcaaatttcatttcaagacacaa
tgcatggataatgttaagcacctaaaggcagctttttgttgaggtaggct
atggctttcagttggtctatattatgtggaactctggcctacagtgtagg
tcttcttctaagatgctatgttttaaagcattcactgtctccatttgaac
acaatgcacattcaggatgactcatctcatttgcacatagaagcactctt
tcagcatactataaacacatgacaatgactattctaaaacaaatgacgca
tacagctctcaataaccacgttagcacatgacatattgaatgcacaagag
aatctactgctgtctgacatgtaagtgtatcttgggtcatagatgtaatt
agaatggaattgaaactgtaatggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_109835188_109835944
seq2: B6Ng01-049O04.b_45_801 (reverse)

seq1  ACAGACCCACCCCACCCCCAACTCAGGACTTTCCCACTGTGCTTAGCCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACCCACCCCACCCCCAACTCAGGACTTTCCCACTGTGCTTAGCCCA  50

seq1  TTGTAGAGAAAATGATGCCTTACAAGTAAAGGACCTCCACCTCAAATGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGAGAAAATGATGCCTTACAAGTAAAGGACCTCCACCTCAAATGCA  100

seq1  TTGTGCATCCAGGGGAACCCGCAGCACAGCACAGGATAGGTATCTAACGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCATCCAGGGGAACCCGCAGCACAGCACAGGATAGGTATCTAACGA  150

seq1  GAACAAGAAAAAAGCCCTACAACCCTTTTATCATTGCCCCAACTCAGCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAAGAAAAAAGCCCTACAACCCTTTTATCATTGCCCCAACTCAGCAC  200

seq1  TATGGATGAAAGGAGAAAGAGAGGAGGATGGGTAAGTGCAGGCAAACTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGATGAAAGGAGAAAGAGAGGAGGATGGGTAAGTGCAGGCAAACTGC  250

seq1  CACAGAGAGCAAGCCGAGTGCATTCAGATGTGAAAATGCATCAAACTACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAGAGCAAGCCGAGTGCATTCAGATGTGAAAATGCATCAAACTACA  300

seq1  GGGCCTCAGAGTCCACAACCAAGAGGATAATTATATCAATATTTAAGAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTCAGAGTCCACAACCAAGAGGATAATTATATCAATATTTAAGAGT  350

seq1  AAAGTGTCTGAAGATACATGTTTAGGTTCTGTATTTCATGTCAGAACAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGTCTGAAGATACATGTTTAGGTTCTGTATTTCATGTCAGAACAAC  400

seq1  AAGACTGCATTATACCTACAAAGTAACCTCTTGCCAACATTTTCTGAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTGCATTATACCTACAAAGTAACCTCTTGCCAACATTTTCTGAAGG  450

seq1  AACTGCTACTTAGTGTTTTCCCCTTGCTGAACATTTTTTCTTGCGGAGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCTACTTAGTGTTTTCCCCTTGCTGAACATTTTTTCTTGCGGAGGC  500

seq1  ACCACATTTTCTGCATGTTATGGGATGGATAGAGCATGGCTTGTCAACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACATTTTCTGCATGTTATGGGATGGATAGAGCATGGCTTGTCAACAT  550

seq1  TTGACTTGCTCGGGTCATCCAGATGCTGCTTCCCACGCATCACCGAGGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTTGCTCGGGTCATCCAGATGCTGCTTCCCACGCATCACCGAGGGG  600

seq1  AGTCCAAAATTAAAAGTTCCTTTTAGTTTAGGCAACTTCTATCATGAGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCAAAATTAAAAGTTCCTTTTAGTTTAGGCAACTTCTATCATGAGTC  650

seq1  ACACTGGCATTCAAAGTTTACAGTACATTTAGAAACCACATACATCAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGGCATTCAAAGTTTACAGTACATTTAGAAACCACATACATCAAGA  700

seq1  CACTCAGAAAAGACTCTAAGTGAGAGACAAGAAAGAATTTTTATAGGGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAGAAAAGACTCTAAGTGAGAGACAAGAAAGAATTTTTATAGGGGT  750

seq1  GGAATTC  757
      |||||||
seq2  GGAATTC  757

seq1: chr10_109787305_109788462
seq2: B6Ng01-049O04.g_67_1191

seq1  GAATTCCATTAACCCTTTCCAAACTTTATTTCCAGGCTTCTTCAGCTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTAACCCTTTCCAAACTTTATTTCCAGGCTTCTTCAGCTTAA  50

seq1  TTTGCCGCAAAGAATGAATTAGGTATAAGTGAAAACTGAAAAGAGCGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCGCAAAGAATGAATTAGGTATAAGTGAAAACTGAAAAGAGCGGCA  100

seq1  GTGTCTGGGGCACTGGGGCTTAAAAATATTAGAGATCTAGATTCTTAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTGGGGCACTGGGGCTTAAAAATATTAGAGATCTAGATTCTTAAGG  150

seq1  CCAGCCACCAGACCCAGAGGGAGCCAAGTGGAAATTGTCATTCCAGTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCACCAGACCCAGAGGGAGCCAAGTGGAAATTGTCATTCCAGTTCT  200

seq1  GTGCCTTCCCTGGGAAGGATGAATAAAAGCCCATGCCCACTCTTTCTAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTTCCCTGGGAAGGATGAATAAAAGCCCATGCCCACTCTTTCTAAA  250

seq1  GTTGCCTTTCTAGGTCTGATCCTGCCAGAGTGGGACACAAATTACCTTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCCTTTCTAGGTCTGATCCTGCCAGAGTGGGACACAAATTACCTTGA  300

seq1  CTAATGTTAATCCTTAAGACCGGTATACACATCAAGCCTGTAAAAATTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGTTAATCCTTAAGACCGGTATACACATCAAGCCTGTAAAAATTAG  350

seq1  AAATATTTTTAAATCCCATAAAGTGGCTTAGCTGCCAGGTTTTTTATGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTTTTAAATCCCATAAAGTGGCTTAGCTGCCAGGTTTTTTATGGT  400

seq1  TTTTTTTTTTTTTTTAATGATAGATCTGAGAACTAATTAACTGCATTATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTAATGATAGATCTGAGAACTAATTAACTGCATTATA  450

seq1  CTATTTAATAAGAGGCAATAATTCAAAAATAAAGAAGATTCTTCTTACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTAATAAGAGGCAATAATTCAAAAATAAAGAAGATTCTTCTTACTG  500

seq1  TTATCATGAATGAATCTGCACTAGAGTTCAGAAATCTAGATATAGTTAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCATGAATGAATCTGCACTAGAGTTCAGAAATCTAGATATAGTTAGA  550

seq1  AGAAAATATATGTTAGAAGGTAATTAATAGTTTTAAACATAAGAACACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATATATGTTAGAAGGTAATTAATAGTTTTAAACATAAGAACACAG  600

seq1  AGGATAATCATCTTACTATATAGTGAGCTTGCTATTAATTAAATGAAGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATAATCATCTTACTATATAGTGAGCTTGCTATTAATTAAATGAAGCT  650

seq1  GGACATCATGGCCAGTATTTGTGATCCTAGCCTTAGGAGGTAGGGGCAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATCATGGCCAGTATTTGTGATCCTAGCCTTAGGAGGTAGGGGCAGA  700

seq1  GGGTCCACAAGTTCGAGGGCAGCCTCAGCAAATTTCATTTCAAGACACAA  750
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GGGTCCACAAGTTCGAGGGCAGCCTCAGCAAATTTCATTTCAAGACAC-A  749

seq1  ATGCATGGATAATGTTAAGCACCT-AAGGCAGC-TTTTGTTGAGGTAAGG  798
      |||||||||||||||||||||||| |||||||| |||||||||||| |||
seq2  ATGCATGGATAATGTTAAGCACCTAAAGGCAGCTTTTTGTTGAGGT-AGG  798

seq1  CTATGGCTTTCAGTTGGTCTATATTATGTGGAACTCTGGCCTACAGTGTA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGCTTTCAGTTGGTCTATATTATGTGGAACTCTGGCCTACAGTGTA  848

seq1  GGTCTTCTCCT-AGATGCTATGTTTTAAAAGCA-TCACTTGTCTCCATTT  896
      |||||||| || |||||||||||||| |||||| |||| |||||||| ||
seq2  GGTCTTCTTCTAAGATGCTATGTTTT-AAAGCATTCAC-TGTCTCCA-TT  895

seq1  TGAACACAAATGCACATTCAAGATGACTCCATCTCATTTTGCACATAGAA  946
      ||||||| |||||||||||| ||||||| ||||||| ||||||||||| |
seq2  TGAACAC-AATGCACATTCAGGATGACT-CATCTCA-TTTGCACATAG-A  941

seq1  AGCACTCTTTCCAGCATAACCTATAAAACACATGACAAATGACTTATTCC  996
      |||||||||| |||||||  |||| ||||||||||| |||||| ||||| 
seq2  AGCACTCTTT-CAGCATA--CTAT-AAACACATGAC-AATGAC-TATTC-  984

seq1  TAAAAACAAAAGGAACCGCAATACAAGCTTCTCAAATTAAACCACGTTAG  1046
        |||||||| |    ||| |||| ||| ||||||    |||||||||||
seq2  -TAAAACAAATG---ACGC-ATAC-AGC-TCTCAA---TAACCACGTTAG  1024

seq1  CACATGGACATATTGAAATTGCACCACAGAGATCTAACTGCTGTCTGACA  1096
      ||||| |||||||||||  ||||| | ||| |||| ||||||||||||||
seq2  CACAT-GACATATTGAA--TGCACAAGAGA-ATCT-ACTGCTGTCTGACA  1069

seq1  TGTAAGGTGTATCTTGGGTTCATAGTAGTAATTAAGATTGGAATTGGAGA  1146
      ||||| |||||||||||| ||||||  |||||| ||| |||||||   ||
seq2  TGTAA-GTGTATCTTGGG-TCATAGATGTAATT-AGAATGGAATT---GA  1113

seq1  ACCTGTAATGGC  1158
      | ||||||||||
seq2  AACTGTAATGGC  1125