BAC Information

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BAC

Clone NameB6Ng01-050A09
Chromosome10 (Build37)
Map Location 76,570,854 - 76,661,598
singlet/doubletdoublet
Overlap geneCol18a1, LOC665762
Upstream geneSlc5a4b, Slc5a4a, LOC100040150, Prmt2, S100b, Dip2a, Pcnt, 2610028H24Rik, A130042E20Rik, Mcm3ap, Lss, 1700027D21Rik, Ftcd, Col6a2, Col6a1, Pcbp3, LOC100041099, Slc19a1
Downstream genePofut2, Adarb1, 1810008A18Rik, Itgb2, Pttg1ip, Sumo3, Ube2g2, LOC674243, LOC670895, Krtap12-1, A030009A09Rik, LOC100041250, LOC100041261, LOC634517, LOC100041281, LOC634504, LOC675294, LOC670880, LOC100040299, LOC675238, C330046G03Rik, EG544710, LOC100041351, 1700009J07Rik, Lrrc3, Trpm2, 1810043G02Rik, Pfkl, Aire, Dnmt3l, Icosl, D10Jhu81e, Pwp2, Tmem1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-050A09.bB6Ng01-050A09.g
ACCDH874095DH874096
length390306
definitionDH874095|Mus musculus domesticus DNA, BAC clone: B6Ng01-050A09, 5' end.DH874096|Mus musculus domesticus DNA, BAC clone: B6Ng01-050A09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,661,203 - 76,661,598)(76,570,854 - 76,571,165)
sequence
aaatgaaatttgtatgcccttcttcccgtcaatctgccttttgtgagttt
aatttttggaccttggtaatagactataaaagtgtagtggagccgggcag
ggcagtggtggcacatgcctttaattccagcacttgagaggcagaggcag
gcgaatctctgagttcgagggccagcctggtctacagagtgagttccagg
acagccagggctacacagagaaaccctgtcctgaaaaacaacaacaacac
caacaaaaataaaacataaaagtgaaggggcaacaacagtcttctgcaca
caaggatcctagagagctgtggtggggaggaaagcccaccttacccctcc
ctgtgctgtgtccctggattggcctatgccccagatacat
acacagctcagtgacagagcaagcaaccagatttttaaatgggcacaaga
cccgagcagacatttctgggaagacccatacagtctgcagcacaaacctg
gtccagatcccaggtcaccagagatgtaagcgaaatccacaacaggacac
accgtgtcacatctgttaggcatgaagcaacaggtggcagagaaaaagga
ggaaccctttacactgctagggggatggaatctaggtcagtcaccagggg
aaacatggtgaagctgggggcgggggtagggcagggagggagagacagac
agacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_76661203_76661598
seq2: B6Ng01-050A09.b_45_440 (reverse)

seq1  ATGTATCTGGGGCATCGGCCAATCCAGGGACACAGCACAGGGAGGGGTAA  50
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ATGTATCTGGGGCATAGGCCAATCCAGGGACACAGCACAGGGAGGGGTAA  50

seq1  GGTGGGCTTTCCTCCCCACCACAGCTCTCTAGGATCCTTGTGTGCAGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGCTTTCCTCCCCACCACAGCTCTCTAGGATCCTTGTGTGCAGAAG  100

seq1  ACTGTTGTTGCCCCTTCACTTTTATGTTTTATTTTTGTTGGTGTTGTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTGTTGCCCCTTCACTTTTATGTTTTATTTTTGTTGGTGTTGTTGT  150

seq1  TGTTTTTCAGGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTCAGGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTC  200

seq1  ACTCTGTAGACCAGGCTGGCCCTCGAACTCAGAGATTCGCCTGCCTCTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGTAGACCAGGCTGGCCCTCGAACTCAGAGATTCGCCTGCCTCTGC  250

seq1  CTCTCAAGTGCTGGAATTAAAGGCATGTGCCACCACTGCCCTGCCCGGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCAAGTGCTGGAATTAAAGGCATGTGCCACCACTGCCCTGCCCGGCT  300

seq1  CCACTACACTTTTATAGTCTATTACCAAGGTCCAAAAATTAAACTCACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTACACTTTTATAGTCTATTACCAAGGTCCAAAAATTAAACTCACAA  350

seq1  AAGGCAGATTGACGGGAAGAAGGGCATACAAATTTCATTTGAATTC  396
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGATTGACGGGAAGAAGGGCATACAAATTTCATTTGAATTC  396

seq1: chr10_76570854_76571165
seq2: B6Ng01-050A09.g_67_378

seq1  GAATTCACACAGCTCAGTGACAGAGCAAGCAACCAGATTTTTAAATGGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACACAGCTCAGTGACAGAGCAAGCAACCAGATTTTTAAATGGGC  50

seq1  ACAAGACCCGAGCAGACATTTCTGGGAAGACCCATACAGTCTGCAGCACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGACCCGAGCAGACATTTCTGGGAAGACCCATACAGTCTGCAGCACA  100

seq1  AACCTGGTCCAGATCCCAGGTCACCAGAGATGTAAGCGAAATCCACAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGGTCCAGATCCCAGGTCACCAGAGATGTAAGCGAAATCCACAACA  150

seq1  GGACACACCGTGTCACATCTGTTAGGCATGAAGCAACAGGTGGCAGAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACACCGTGTCACATCTGTTAGGCATGAAGCAACAGGTGGCAGAGAA  200

seq1  AAAGGAGGAACCCTTTACACTGCTAGGGGGATGGAATCTAGGTCAGTCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAGGAACCCTTTACACTGCTAGGGGGATGGAATCTAGGTCAGTCAC  250

seq1  CAGGGGAAACATGGTGAAGCTGGGGGCGGGGGTAGGGCAGGGAGGGAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGAAACATGGTGAAGCTGGGGGCGGGGGTAGGGCAGGGAGGGAGAG  300

seq1  ACAGACAGACAG  312
      ||||||||||||
seq2  ACAGACAGACAG  312