BAC Information

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BAC

Clone NameB6Ng01-050G21
Chromosome10 (Build37)
Map Location 23,884,734 - 23,885,917
singlet/doubletsinglet
Overlap geneStx7
Upstream geneEya4, Rps12, 1110021L09Rik, Vnn3, Vnn1, Taar1, Taar2, Taar3, Taar4, Taar5, Taar6, Taar7a, Taar7b, Taar7c-ps, Taar7d, Taar7e, LOC628480, Taar7f, Taar8a, Taar8b, Taar8c, Taar9
Downstream geneMoxd1, LOC628537, Ctgf, Enpp1, Enpp3, Crsp3, Arg1, EG667479, LOC212399
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-050G21.bB6Ng01-050G21.g
ACCDH874376DH874377
length1,1481,170
definitionDH874376|Mus musculus domesticus DNA, BAC clone: B6Ng01-050G21, 5' end.DH874377|Mus musculus domesticus DNA, BAC clone: B6Ng01-050G21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttccaaagtaactaaaagtatcaactacttttaaaaaaggaact
ctggtatacacatgcagggcagttactctgtaatgaaaagtgctgctcag
gaatggctacagaacaaacaggcaagggatttcataaagaactcaaagag
atgtattgtcaaaataattccaggaaacaaaaactagtcagcttcaagca
accaaatacatgtaggaccattgcccaactaaccacaaactgtaatttca
taaaagggaagcaacactgtgatccaaccaatccctgtgcatagattttg
ttcatggtaaataaggctaaaagtaactgtgattatttatctgaatgtag
cctgctgtgttcacatggggatgctggcatatggactgcatcactttatc
catgtagatctctaagcatgcattctggaaacaggataggtgccaagatc
cccggctcataaacaaacattcagtcttcagataaaattttcatgaataa
agggtggtgaatatattgatgttaacacccactaatggaatacatgaagc
tagcaggtgcaggagaaaaggtaaatcataaaaaataccctttgcatatt
ataacctcatgctcttaattttttttttaatactttggtgactgaggcat
tcaaacctttctctcaaagattaacattttaatgggggaacacagggcgg
aaatcgtaattaaatttttatttttctgataaaaggcattataaaatgaa
agcaagatgatgagaaaatgattataaagaatagccaagtaagacatccc
ttagataaatgtactgaggtcacctgaatacacaaaagggtaatacacat
gcggctgcttgcagcccatgaaccattgttctccccttagagtgggagag
ccattcggaaagtcctactgagctgttacgagaactcagtgttacctttc
tgcagcacaggtgggaagcgggttcaagctctgaggtgtggaaagggtca
gtccagagcctcagagacctgaggtggcagtggggagcagttggatgtcg
gtgtgacagaccagctccacttcttgcaaggcagaaggtcacagatgaat
gaaatcggggtgagtgtcatgcataaactgccttgttgtccttggaga
gaattcagtaggaattcagtaagaaggttacctattcagtaacattcaaa
tttacttcttgtagagacacattacagagaacagagccagaaagctcagg
gctggtctgcagagtgtttacttgagacaatagccagtcttacccagaca
agggaatacacaatggcctagctaataggtgagtttaccatgtaagagtt
agggaatcccactgagacaggaatcttcactacagccaggtatagcaggc
tacactgcatattagaagcaagttgttgaattcttctgtcaaatgtagat
tctccacagatacttaaaagaacagccaagttacactcatacaagaattt
atcaaggcctaggaaatgggggttgtggtattgtgttattcatgagaagg
tctgctagagcagaaccccctggtgctagctttcacaaggctcaaaggag
tagcacaaattgtgtctagggagtgaaatccttacctgtcattagctgac
cctaagcagagctgttttatctttactgtaaatattacctggttcctgta
agtcctttgaagtcattcctttgttttgtgtcagctaacttcaatgtact
ttgcctgctgtgacatcctaccccctttattgtctgtattatataagact
ggtgttcactttgtgacaatacattcagattctacacaatctcctgtgtt
gcgtctgtctgtcatttattcaccgattccttgtccatctgcaaccagag
acccgttctacgcagacaagggaccaagagggtctgtggcacttcagtct
tttccctcacccaatattagatcagtttccctcctgattcccccttcatt
ttccctccaggtccctccctcgctcccacttgtgactgctttcttctctt
ttccaagtgggactgacttggcacttcagctgttgaactttaaaattctg
tggactgaatttggtatttttgtactttggggggtggtgctatatactac
ttatagtagtaaccactaatgcaagtccttttgggctcgagtacctggac
caggagaattttctagttccctcatatgactgcaaactagggatgcctca
cctattgctgatagatttccatgtaagggaagtcacacacgtagttcggt
ccatctctcgcccgggagcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_23884734_23885917
seq2: B6Ng01-050G21.b_43_1190 (reverse)

seq1  TCTCCACAGTGACAACAAGGCAGATTTTTAATGCATGAGCACACGTCACA  50
      |||||| || |||||||||||||    || |||||||   |||   | ||
seq2  TCTCCA-AG-GACAACAAGGCAG----TTTATGCATG---ACA---CTCA  38

seq1  CCCAGATTTCAATTCATCTGTGACTCTCTTGGCCCTTGCAAGGAAGTGTG  100
      ||| |||||| |||||||||||||   |||   |||||||| |||||| |
seq2  CCCCGATTTC-ATTCATCTGTGAC---CTTCTGCCTTGCAA-GAAGTG-G  82

seq1  AGCCTTGTGCTGTTCACACCCGCATCCAACCTGCCTCCCCCACTGCCCAC  150
      |||  ||  ||| |||||||  ||||||| ||||   |||||||| ||||
seq2  AGC--TGGTCTG-TCACACCGACATCCAA-CTGC--TCCCCACTG-CCAC  125

seq1  CTCAGGTTCTTCCTGAGGCTTCTTGGGCTGACCCTTT-CACACCTCAGGG  199
      |||||| |||  ||||||||   ||| |||||||||| |||||||||| |
seq2  CTCAGG-TCT--CTGAGGCT--CTGGACTGACCCTTTCCACACCTCAGAG  170

seq1  CCTTGGAACCCGCTTCCCACCTGTGCCTGCAGAAAGGTAACACTGAGTTC  249
      |  | |||||||||||||||||||| ||||||||||||||||||||||||
seq2  C--TTGAACCCGCTTCCCACCTGTG-CTGCAGAAAGGTAACACTGAGTTC  217

seq1  TCCGTAAACAGGCTCAGTAGGACTTTCCGAATGGCTCTCCCACTCCTAAG  299
      | ||| |||| ||||||||||||||||||||||||||||||||| |||||
seq2  T-CGT-AACA-GCTCAGTAGGACTTTCCGAATGGCTCTCCCACT-CTAAG  263

seq1  GGGAGAACAATGGTTCATGGGCTGCAAGCAGCCGCATGTGTATTACCCTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAACAATGGTTCATGGGCTGCAAGCAGCCGCATGTGTATTACCCTT  313

seq1  TTGTGTATTCAGGTGACCTCAGTACATTTATCTAAGGGATGTCTTACTTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTATTCAGGTGACCTCAGTACATTTATCTAAGGGATGTCTTACTTG  363

seq1  GCTATTCTTTATAATCATTTTCTCATCATCTTGCTTTCATTTTATAATGC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTCTTTATAATCATTTTCTCATCATCTTGCTTTCATTTTATAATGC  413

seq1  CTTTTATCAGAAAAATAAAAATTTAATTACGATTTCCGCCCTGTGTTCCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTATCAGAAAAATAAAAATTTAATTACGATTTCCGCCCTGTGTTCCC  463

seq1  CCATTAAAATGTTAATCTTTGAGAGAAAGGTTTGAATGCCTCAGTCACCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTAAAATGTTAATCTTTGAGAGAAAGGTTTGAATGCCTCAGTCACCA  513

seq1  AAGTATTAAAAAAAAAATTAAGAGCATGAGGTTATAATATGCAAAGGGTA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATTAAAAAAAAAATTAAGAGCATGAGGTTATAATATGCAAAGGGTA  563

seq1  TTTTTTATGATTTACCTTTTCTCCTGCACCTGCTAGCTTCATGTATTCCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTATGATTTACCTTTTCTCCTGCACCTGCTAGCTTCATGTATTCCA  613

seq1  TTAGTGGGTGTTAACATCAATATATTCACCACCCTTTATTCATGAAAATT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGGGTGTTAACATCAATATATTCACCACCCTTTATTCATGAAAATT  663

seq1  TTATCTGAAGACTGAATGTTTGTTTATGAGCCGGGGATCTTGGCACCTAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTGAAGACTGAATGTTTGTTTATGAGCCGGGGATCTTGGCACCTAT  713

seq1  CCTGTTTCCAGAATGCATGCTTAGAGATCTACATGGATAAAGTGATGCAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTTCCAGAATGCATGCTTAGAGATCTACATGGATAAAGTGATGCAG  763

seq1  TCCATATGCCAGCATCCCCATGTGAACACAGCAGGCTACATTCAGATAAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATATGCCAGCATCCCCATGTGAACACAGCAGGCTACATTCAGATAAA  813

seq1  TAATCACAGTTACTTTTAGCCTTATTTACCATGAACAAAATCTATGCACA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCACAGTTACTTTTAGCCTTATTTACCATGAACAAAATCTATGCACA  863

seq1  GGGATTGGTTGGATCACAGTGTTGCTTCCCTTTTATGAAATTACAGTTTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTGGTTGGATCACAGTGTTGCTTCCCTTTTATGAAATTACAGTTTG  913

seq1  TGGTTAGTTGGGCAATGGTCCTACATGTATTTGGTTGCTTGAAGCTGACT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTAGTTGGGCAATGGTCCTACATGTATTTGGTTGCTTGAAGCTGACT  963

seq1  AGTTTTTGTTTCCTGGAATTATTTTGACAATACATCTCTTTGAGTTCTTT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTTGTTTCCTGGAATTATTTTGACAATACATCTCTTTGAGTTCTTT  1013

seq1  ATGAAATCCCTTGCCTGTTTGTTCTGTAGCCATTCCTGAGCAGCACTTTT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATCCCTTGCCTGTTTGTTCTGTAGCCATTCCTGAGCAGCACTTTT  1063

seq1  CATTACAGAGTAACTGCCCTGCATGTGTATACCAGAGTTCCTTTTTTAAA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACAGAGTAACTGCCCTGCATGTGTATACCAGAGTTCCTTTTTTAAA  1113

seq1  AGTAGTTGATACTTTTAGTTACTTTGGAAGAATTC  1184
      |||||||||||||||||||||||||||||||||||
seq2  AGTAGTTGATACTTTTAGTTACTTTGGAAGAATTC  1148