BAC Information

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BAC

Clone NameB6Ng01-050P07
Chromosome10 (Build37)
Map Location 38,189,347 - 38,190,348
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100040915, Lama4, 1700025K23Rik, Tube1, EG624165, LOC100040964, Fyn, LOC629337
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-050P07.bB6Ng01-050P07.g
ACCDH874742DH874743
length1,250989
definitionDH874742|Mus musculus domesticus DNA, BAC clone: B6Ng01-050P07, 5' end.DH874743|Mus musculus domesticus DNA, BAC clone: B6Ng01-050P07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacataatgaaagccatatacagcaaacca
gtaaccaatatcaaactaaatggtgagaaagtggaagcaatcatactaaa
accagagactagacaaggctgccccctctcttcctacccattcaatatag
tacttgaagtcctagccagagaaattagacaacaaaaggagatcaaagga
atacaaattggaaaggaagaagtcaaaatatcactatttgcagatgatat
gatagtatatataagtgatcctaaaaattccaccagagaactcctaaacc
tgattaacagttttaatgcagtagctggatataaaattaactaaaacaaa
tcagtggcctttctgtacacaaaggataaacaggctgagaaagaaattag
agaaataacacccttcaaagtagtcacaaataatataaaataccttggtg
tgattctaactaagggagtgaaaaatctgtatgataggaacctcaagtct
ctgaagaaagaaatcgaggaagatttcagaagatggaaagatctcccatg
ctcatggattggcaggattaatacactcaaaatggctatcctgcctaaag
caacctatagattcaatgcaatccccatcaaaattacaactcaattcttc
acagagttagaaagggcaatttacacaattcatcaggaataacaaaaatc
ctaggatagtaaaaaactattctcagcaataaaagaaactctggtagaat
cacaatccctgacctcaaactgtactactgagcaattatgataaaaaact
gcatggtactggtacactgacacacaggtagaccaatagaatggaattga
atacccagaaatgaacccacacacatatggtcacttgatctttgacaatg
gagctaaaccatccagtggaaagagacagcatcttcaacaaatggtgctg
tctcaactggtgttaccacgtagagatgcaaatgatccaatctatctcct
tgtacaagctcagtctagtggatcgagacttcctcataaatcagagaaac
tgaacttatgaggagaaagtgggaagagcctcgatatatgggttcaggga
agattcaaacgaacaacattgccttggtctttagattagaatcacaaatt
gatctctaactgcagtcctgtgagcaagacctttataagatattgacacg
attggaggcttgcatcgaatcactaggtgtgtatcctgataggcactcct

gaattccattctcactggaaaatttcctgatggaccaggcttcacaacac
ttcacagtgctaagcaactacacagcacactgaggggtctcctgctgagt
tcaatcaattcaaatacccgttagcttacctaaataaatttcactccaaa
gaagaccctttaagaggtgggatgtgactttacagatgggaaatgtttct
cttcatctcctgacaaacaagtgctctcctctaaaaaccaaaccctcaga
taagcatttgatgggcatgcttattggaaagtggagatttctgaaatttc
tctctctctcaaaaaaaaaaaaaaagacttttaaacatgttccaaatatt
ttttttaaatcagtgaaaattcagtttttggcctcaatttcttttttaaa
aatttaattaaaacacaatcacatcatttttctacttcttctccctcttg
tttctcatgcctgcccttggacaccatcatggtctcctttactttagcca
ttgttggtaagtatgtgtggttttactgctgtgaacagacaccatgacca
aggtaactctggtaagacatttaactggggctggtttacaggctcagagg
tttaatccagtatcatcaaggcatgacagtgttcagacagacatggtgca
ggatgagctgagagttcaatatcttcatctgaagactgctagaagactgg
ctttcaggcagcttggatgagagtcttaaagcccatgcccacagtgacac
acattctaattctgccactccctgggccaagcatattcaaccaccacagt
gtgataaatgaattaacagataactggtgagtctattcatggtgtataca
tgtttctaggcctaaccacctcatactgaatacaaactaggagggtcatg
cttttaatagaagggattcaccctcttagttttaattgcatccacagtag
gcccatagattgtcatctaagtaagacatcaacttctgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_38189347_38190348
seq2: B6Ng01-050P07.g_68_1056 (reverse)

seq1  ACAGAAGTTGATGTCCTAACTTAGATGGACAAAATCTTATGGGGCCTAAC  50
      |||||||||||||| || |||||||||   | |||| ||| |||||| ||
seq2  ACAGAAGTTGATGT-CTTACTTAGATG---ACAATC-TAT-GGGCCT-AC  43

seq1  TGTTGGATGCAATTAAAAACTAAAGAGGGTGAATCCC-TCTACTTAAAGC  99
      || ||||||||||| |||||| ||||||||||||||| |||| | |||||
seq2  TG-TGGATGCAATT-AAAACT-AAGAGGGTGAATCCCTTCTATTAAAAGC  90

seq1  ATGACCCTCCTAGTTTGTTATTCAGTACTGA-GTGGTTAGGCCTAGAAAC  148
      ||||||||||||||||| ||||||||| ||| ||||||||||||||||||
seq2  ATGACCCTCCTAGTTTG-TATTCAGTA-TGAGGTGGTTAGGCCTAGAAAC  138

seq1  ATGTATACAACACTGAATAGACTCACCAGTTATCTGTTTATTCATTTATT  198
      ||||||||| || ||||||||||||||||||||||||| ||||||||| |
seq2  ATGTATACACCA-TGAATAGACTCACCAGTTATCTGTTAATTCATTTA-T  186

seq1  CACACTGTGGTGGTTTGAATATGCTTGGCCCAGGGAGTGGCAGAATTAGA  248
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CACACTGTGGTGG-TTGAATATGCTTGGCCCAGGGAGTGGCAGAATTAGA  235

seq1  ATGTGTGTCACTGTGGGCATGGGCTTTAAGACTCTCATCCAAGCTGCCTG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTGTCACTGTGGGCATGGGCTTTAAGACTCTCATCCAAGCTGCCTG  285

seq1  AAAGCCAGTCTTCTAGCAGTCTTCAGATGAAGATATTGAACTCTCAGCTC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCAGTCTTCTAGCAGTCTTCAGATGAAGATATTGAACTCTCAGCTC  335

seq1  ATCCTGCACCATGTCTGTCTGAACACTGTCATGCCTTGATGATACTGGAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGCACCATGTCTGTCTGAACACTGTCATGCCTTGATGATACTGGAT  385

seq1  TAAACCTCTGAGCCTGTAAACCAGCCCCAGTTAAATGTCTTACCAGAGTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCTCTGAGCCTGTAAACCAGCCCCAGTTAAATGTCTTACCAGAGTT  435

seq1  ACCTTGGTCATGGTGTCTGTTCACAGCAGTAAAACCACACATACTTACCA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGGTCATGGTGTCTGTTCACAGCAGTAAAACCACACATACTTACCA  485

seq1  ACAATGGCTAAAGTAAAGGAGACCATGATGGTGTCCAAGGGCAGGCATGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGGCTAAAGTAAAGGAGACCATGATGGTGTCCAAGGGCAGGCATGA  535

seq1  GAAACAAGAGGGAGAAGAAGTAGAAAAATGATGTGATTGTGTTTTAATTA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAAGAGGGAGAAGAAGTAGAAAAATGATGTGATTGTGTTTTAATTA  585

seq1  AATTTTTAAAAAAGAAATTGAGGCCAAAAACTGAATTTTCACTGATTTAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTAAAAAAGAAATTGAGGCCAAAAACTGAATTTTCACTGATTTAA  635

seq1  AAAAAATATTTGGAACATGTTTAAAAGTCTTTTTTTTTTTTTTTGAGAGA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATATTTGGAACATGTTTAAAAGTCTTTTTTTTTTTTTTTGAGAGA  685

seq1  GAGAGAAATTTCAGAAATCTCCACTTTCCAATAAGCATGCCCATCAAATG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAAATTTCAGAAATCTCCACTTTCCAATAAGCATGCCCATCAAATG  735

seq1  CTTATCTGAGGGTTTGGTTTTTAGAGGAGAGCACTTGTTTGTCAGGAGAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATCTGAGGGTTTGGTTTTTAGAGGAGAGCACTTGTTTGTCAGGAGAT  785

seq1  GAAGAGAAACATTTCCCATCTGTAAAGTCACATCCCACCTCTTAAAGGGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGAAACATTTCCCATCTGTAAAGTCACATCCCACCTCTTAAAGGGT  835

seq1  CTTCTTTGGAGTGAAATTTATTTAGGTAAGCTAACGGGTATTTGAATTGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTGGAGTGAAATTTATTTAGGTAAGCTAACGGGTATTTGAATTGA  885

seq1  TTGAACTCAGCAGGAGACCCCTCAGTGTGCTGTGTAGTTGCTTAGCACTG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACTCAGCAGGAGACCCCTCAGTGTGCTGTGTAGTTGCTTAGCACTG  935

seq1  TGAAGTGTTGTGAAGCCTGGTCCATCAGGAAATTTTCCAGTGAGAATGGA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTGTTGTGAAGCCTGGTCCATCAGGAAATTTTCCAGTGAGAATGGA  985

seq1  ATTC  1002
      ||||
seq2  ATTC  989