BAC Information

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BAC

Clone NameB6Ng01-051C21
Chromosome10 (Build37)
Map Location 104,136,192 - 104,136,342
singlet/doubletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051C21.bB6Ng01-051C21.g
ACCDH874900DH874901
length9091,187
definitionDH874900|Mus musculus domesticus DNA, BAC clone: B6Ng01-051C21, 5' end.DH874901|Mus musculus domesticus DNA, BAC clone: B6Ng01-051C21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtggaccatatcttgtatattctctatgtttgttttttgtttg
tttgtttgtttgtttgccttgctaatttcaacttattagtgagtacatgc
catgcatgtccttttcagtctgagttgcttcactcagtttcatccatttg
cccgcaaaagtcaggatgttctcattcttaatcgatgagtagtgttccat
tgtgtaaatgaataacattttctgcatccattcttctgttgggggacatc
taggttgtttctagcctctggctatcatgaataaagcctctatgaacata
gtggaacatgtacccctgtggcatggtgggccatcttttgggtatattcc
caagagtggtgtagctgggtcttcaggtagatctatttccaattttctga
ggaacctccagcttgatttccagagtggttgtaccagtttgcaatcccac
cagaaacagaggaatattcctctttctccacatcctctccaacatgtgtt
gtcacctgaggttttgatcttagacattctgactggtgtaaggaagaatg
tcagggtcattttgatttgcatttctctcttcactaaggactttgaacat
ttctttagatgtttctcagccattccagattgtgaatacaagttgtgaat
tctcctttagttctataccccaatttttgcctgaattgtttgattttttt
ggtgattaacttcttgagttcctcttttttttaaatctgtgaatatttta
tattaaaattttcttctagttttttttctcagttttaataacatccaagt
acagtgtttaacataaattttacacaggacatgcaaaattaattccttga
ttaatttaatcattaattaattgatgatatattttcaaaagttttaagtt
aattttctt

gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattaagaatttttgc
atcgatgttcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagaataccttctacttctatcttgtgaaaaagtttgtgcagaactgg
agttagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcacccctgagttgattatt
tcctgccgtctactcctcttgggtgaatttgcttcctttttttctagagc
ttttagatgtgttgtcaagctgctagtatgtgctctctccgtttttcttg
aaggaactcatagctatgagtttcttcttagaaatgctttcatgtgttcc
aaaggtttgggtacgttggggcttcaatttcattaactcttaaaagtctt
taattttcttctttattcctttcttgacaagtatcattgaaaaagagagt
gtgctagtttccacgtgtaggtgccttccgtatatttgtttatgaaacac
ccctcaggcacgggggatgatcgagtaggaacatacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104136192_104136342
seq2: B6Ng01-051C21.b_78_494 (reverse)

seq1  CTGGTGAGATTGCAAGCTGGTACAACCACTCTGGAAATTA---------T  41
      |||||| |||||||| |||||||||||||||||||||| |         |
seq2  CTGGTGGGATTGCAAACTGGTACAACCACTCTGGAAATCAAGCTGGAGGT  50

seq1  TTGTTATTGTAATGCCCA-AAATTTGCCT-AAGCC----CTACACATC--  83
      |  | |    | ||   | | || | ||| ||| |    ||||||  |  
seq2  TCCTCAGAAAATTGGAAATAGATCTACCTGAAGACCCAGCTACACCACTC  100

seq1  -TGGGA--------------------ACCAGGTAAC-----TCCATGGAA  107
       |||||                    |||| |  ||     | ||||   
seq2  TTGGGAATATACCCAAAAGATGGCCCACCATGCCACAGGGGTACATGTTC  150

seq1  TGCTAGG--AATTGTAG-TTCTGGCAAAACAAACAAA--CAAAAAACAA-  151
        ||| |   || |  | ||    ||  | |  || |  | | |||||| 
seq2  CACTATGTTCATAGAGGCTTTATTCATGATAGCCAGAGGCTAGAAACAAC  200

seq1  --------------------------------------------------  151
                                                        
seq2  CTAGATGTCCCCCAACAGAAGAATGGATGCAGAAAATGTTATTCATTTAC  250

seq1  --------------------------------------------------  151
                                                        
seq2  ACAATGGAACACTACTCATCGATTAAGAATGAGAACATCCTGACTTTTGC  300

seq1  --------------------------------------------------  151
                                                        
seq2  GGGCAAATGGATGAAACTGAGTGAAGCAACTCAGACTGAAAAGGACATGC  350

seq1  --------------------------------------------------  151
                                                        
seq2  ATGGCATGTACTCACTAATAAGTTGAAATTAGCAAGGCAAACAAACAAAC  400

seq1  -----------------  151
                       
seq2  AAACAAACAAAAAACAA  417


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