BAC Information

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BAC

Clone NameB6Ng01-051F05
Chromosome10 (Build37)
Map Location 37,492,487 - 37,493,512
singlet/doubletsinglet
Overlap genenone
Upstream geneHs3st5, Hdac2, Marcks, LOC100040846
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051F05.bB6Ng01-051F05.g
ACCDH875002DH875003
length1,2321,019
definitionDH875002|Mus musculus domesticus DNA, BAC clone: B6Ng01-051F05, 5' end.DH875003|Mus musculus domesticus DNA, BAC clone: B6Ng01-051F05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattggcacagggggaaatttcctaaacagaactccaatggctca
tgatctaaaatcaataactgataaatgggatctcatgcaactggaaagct
tctgtaaggcaaaggacatagtcgataagacaaatcaccaaccttcagat
tggggagtaaaactacactattcccacattcaatagagggataatatcca
aaatatatgaagaactcaagacgttaaacaccaaaaagccaaacaaccca
gtcaaaaaatggggtatagacctaaaccaagaattcacaacagaggaatc
tcaattggctgagaagcacttaaagaaatgctcaaagtccttattaatca
gggaaatgtaaatccaaacgaccctgagattctactttacatgaatcaga
atgcctaagatcaaaacctcaggctactgcacatgttggtgaggatgtgg
aaaaagagaaacactccttcattgttggtaggattgcaaactggtacaac
cactctggaaattactatggaggttcctcagaaaattggaaatggatcta
cctgaaggtccagcaggaccactcttgggaatataccgaaaagatgcctt
acagtgccatgggggcacatgttccactatgttcatagcagccttgtttg
tgatagccagaagctggaaacaacccagatgtcccaggtcagaagaatag
atacagaaaatggggctcatttccacagtggaatactactcagctattaa
gaaagagtacatcctgtgttttgaaagcaaaatagatggaactagaaaat
atcatcctgagtgaggtaactcagacccaaaagaacatgcatggaatgta
gtcactaaataagtggatattagccataaacaaacaaacaaacaaacaag
aagaaaagaaatgtacagaatacccacgatacagtccacaaaactagaga
aggagtagctctttaaagcacagtctcaaggtcaaatatctaggactgcc
tttaaaatcttcatgttatccccactgaagtaattaatctggtccctgca
tattctgtgctataaattttgtctaacctcactacttttcaatttgaata
atgatgctttgaaaaatagttaaataccttgctgcagagggttatcctag
tcatagtcatttcttcccatctcgtagaaactttggtcatttgaaagagc
aacagcagcttctggaaaaggctgcagtgtag
gaattcaattttatatctgaaaaatcctgaatctaacttccttagtgatg
gtttgcaaaaggaacatcaaacaacagagcttgctctatcaaagcagggt
atgattctgtccttccattcagctattctgttgtcgtcagttcataaata
gccttgaattcactccttcagaagcaagctaccctggatagaaacttgat
tgagctgataatgtagacaaacatttccatgttggttgatgctgtgaagt
aatttcacactggtcttgctatgctcactcctattgtgtttcataacaat
gaagttgcataagaaaggtgaaatattgttgatataatatctacatcaag
aatatgacctcctatgaagctgattcattactttgatatagtggtgaaat
ttttaagctgaaatgaactatttaaataatgaaacaagaattaagatgga
tgatagatttctaagtacagctttaatttatgtaatctacagtgaaaaaa
aaatcagtctattcagaaaatatttccagtccaacagatgtcatttgttt
tcagatttattttaatcttatgtatgtctgtgatttgtctgaatgtatgc
atgtatatcacttgggtgcctggtatcctcatatgtcaaagaagacattg
gatgcctcagttttggaggctctgaagttgtgagccactatgtggatatt
ggaaactgaacctggaataactgcaagaataacaaatgttcatgacaact
gagccatctctccatcacaggtgtaaaatcttgcacttaaccaatttgtt
tttatgggcctgcctattcatatatattataggtgtcctctgttccatgg
gtttcttttaatcccactttgataactgatataagaaaatgattctttta
aaagtaagcttacccctgtactcctaccatgggtgtttggttcccattct
aagaagggcaaagtgcccacactttgtcttcggtcttctggagtttcggt
gttttgcatactgtactta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_37492487_37493512
seq2: B6Ng01-051F05.g_67_1085

seq1  GAATTCAATTTTATATCTGAAAAATCCTGAATCTAACTTCCTTAGTGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTTTATATCTGAAAAATCCTGAATCTAACTTCCTTAGTGATG  50

seq1  GTTTGCAAAAGGAACATCAAACAACAGAGCTTGCTCTATCAAAGCAGGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCAAAAGGAACATCAAACAACAGAGCTTGCTCTATCAAAGCAGGGT  100

seq1  ATGATTCTGTCCTTCCATTCAGCTATTCTGTTGTCGTCAGTTCATAAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTCTGTCCTTCCATTCAGCTATTCTGTTGTCGTCAGTTCATAAATA  150

seq1  GCCTTGAATTCACTCCTTCAGAAGCAAGCTACCCTGGATAGAAACTTGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGAATTCACTCCTTCAGAAGCAAGCTACCCTGGATAGAAACTTGAT  200

seq1  TGAGCTGATAATGTAGACAAACATTTCCATGTTGGTTGATGCTGTGAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTGATAATGTAGACAAACATTTCCATGTTGGTTGATGCTGTGAAGT  250

seq1  AATTTCACACTGGTCTTGCTATGCTCACTCCTATTGTGTTTCATAACAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCACACTGGTCTTGCTATGCTCACTCCTATTGTGTTTCATAACAAT  300

seq1  GAAGTTGCATAAGAAAGGTGAAATATTGTTGATATAATATCTACATCAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTGCATAAGAAAGGTGAAATATTGTTGATATAATATCTACATCAAG  350

seq1  AATATGACCTCCTATGAAGCTGATTCATTACTTTGATATAGTGGTGAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGACCTCCTATGAAGCTGATTCATTACTTTGATATAGTGGTGAAAT  400

seq1  TTTTAAGCTGAAATGAACTATTTAAATAATGAAACAAGAATTAAGATGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAGCTGAAATGAACTATTTAAATAATGAAACAAGAATTAAGATGGA  450

seq1  TGATAGATTTCTAAGTACAGCTTTAATTTATGTAATCTACAGTGAAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGATTTCTAAGTACAGCTTTAATTTATGTAATCTACAGTGAAAAAA  500

seq1  AAATCAGTCTATTCAGAAAATATTTCCAGTCCAACAGATGTCATTTGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAGTCTATTCAGAAAATATTTCCAGTCCAACAGATGTCATTTGTTT  550

seq1  TCAGATTTATTTTAATCTTATGTATGTCTGTGATTTGTCTGAATGTATGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATTTATTTTAATCTTATGTATGTCTGTGATTTGTCTGAATGTATGC  600

seq1  ATGTATATCACTTGGGTGCCTGGTATCCTCATATGTCAAAGAAGACATTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATATCACTTGGGTGCCTGGTATCCTCATATGTCAAAGAAGACATTG  650

seq1  GATGCCTCAGTTTTGGAGGCTCTGAAGTTGTGAGCCACTATGTGGATATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCCTCAGTTTTGGAGGCTCTGAAGTTGTGAGCCACTATGTGGATATT  700

seq1  GGAAACTGAACCTGGAATAACTGCAAGAATAACAAATGTTCATGACAACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACTGAACCTGGAATAACTGCAAGAATAACAAATGTTCATGACAACT  750

seq1  GAGCCATCTCTCCATCACAGGTGTAAAATCTTGCACTTAACCAATTTGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCATCTCTCCATCACAGGTGTAAAATCTTGCACTTAACCAATTTGTT  800

seq1  TTTAT-GGCCTGCCTATTCATATATATTATAGGTGTCCTCTGTTCCCATG  849
      ||||| |||||||||||||||||||||||||||||||||||||| |||||
seq2  TTTATGGGCCTGCCTATTCATATATATTATAGGTGTCCTCTGTT-CCATG  849

seq1  GGTTTCTTTTAATCCCACTTTGATAACTGATATAAGAAAAGGATTCATTT  899
      |||||||||||||||||||||||||||||||||||||||| ||||| |||
seq2  GGTTTCTTTTAATCCCACTTTGATAACTGATATAAGAAAATGATTCTTTT  899

seq1  AGAAGTAAGCCTTACCCCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAA  949
      | ||||||| ||||||||||| |||||| |||||||||||| |||||| |
seq2  AAAAGTAAG-CTTACCCCTGT-ACTCCTACCATGGGTGTTTGGTTCCC-A  946

seq1  TTCTAAGAAGGGGCAAAGTGCCCACACTTTGGTCTTCGTTCTTCTGGAGT  999
      ||||||||| |||||||||||||||||||| ||||||| |||||||||||
seq2  TTCTAAGAA-GGGCAAAGTGCCCACACTTT-GTCTTCGGTCTTCTGGAGT  994

seq1  TTCGTGTGTTTTGCAAACTGTAACTTA  1026
      |||| |||||||||| ||||| |||||
seq2  TTCG-GTGTTTTGCATACTGT-ACTTA  1019