BAC Information

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BAC

Clone NameB6Ng01-051I01
Chromosome10 (Build37)
Map Location 29,450,786 - 29,636,886
singlet/doubletdoublet
Overlap geneLOC623064
Upstream geneE430004N04Rik, 4930519F09Rik, 2310057J18Rik, LOC432447, 6330407J23Rik, Echdc1, Rnf146, Rspo3, EG630389, Rpl12
Downstream geneLOC674389, Gm232, LOC667696, LOC100040542, 2610036L11Rik, LOC212815, Trmt11, Hint3, Ncoa7, LOC382354, Hey2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051I01.bB6Ng01-051I01.g
ACCDH875123DH875124
length1,0141,053
definitionDH875123|Mus musculus domesticus DNA, BAC clone: B6Ng01-051I01, 5' end.DH875124|Mus musculus domesticus DNA, BAC clone: B6Ng01-051I01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(29,635,850 - 29,636,886)(29,450,786 - 29,451,841)
sequence
gaattctttgagagcatgattagttttaaaactgaagaaactcaacttcc
tgaaaatggtgaaatataaaggaaaagtcatacaggggaaactctactac
caaatattatttgctatcatgacttagtagatggctaaaaatgacacaat
gaaaagtttggaaacacgggttaatacatatgtcagagtcaacatagcaa
gtgacagagaaaacaaagaaatcattaaacacctgtgtctaataggataa
tttgccatatatagaaaacatgagatggaatactatctcgggtcagtatg
ttccattttggtgggataagatgatgtactttaaaatagtaaggaaatta
tgaatatgtctacccgtaacatcatgaatgacaacttcttcttcttcttt
tttttttttttttttggtttggttttggttttggttttttgtttttcgag
acagggtttctctctatagctttcctggaactcactctgtagaccaggct
ggtctcaaactcagaaatccatctgcctctgcctcccaaaaggcatgtgc
caccactgcctggcgaatgacaacttcttttaagtaacatatttaaaaaa
caaaaaacaaaaaacaaaaaaaaagaaagaaacaaacaaacaaataaaca
aaaaaagcacatttgatttgtatatttattggctttactttacatctact
agaaaagctaaaaaagaatattattattctagaaagttgcaaagcacact
gccaaaaacattattttaaccctctaaataataaagaattgtttttatgg
ataaagaaaaaaacaaaacaccataagaaagaacacagatagcatagact
ttgataaatcttaaaataattattggtagtgaaaatgtaaataactggac
ttttttttttacattttgtattctcagaatacagattctaaacttttcac
gatagccaggaataggaccatgaaatcatacagtttgttacggataatga
tcactaatttaaaa
gaattcttgctggcgagatactagctcgggatatcagacttttcagtttg
ttttgtgatctttagtcttcatctctgatctaggattagatgtaactcaa
gagcacacaaaaaacacctaagagaaaaactgtgaagtttttgagtatcc
cagattctgcctttactgctctggtcagaccttcatttgacccagaaatt
ttctacttatacaggtcaagtaagtatttaaggggcttctctggtattct
tattttttctaagcttgacatgacttttgccaccatgaattagagttcct
atggaggccgacagaatacctcagtccaaaagtttgccctatgattgggg
tttgaatcaggtactagaggttcagaagtcagcacttagaacaactttca
aaaatcaaaattgtctactatggatagattagaatacttaacattttata
tgttttagacttttgtaaatattttctttcagtagcatcaagaagtagat
aactactcttgtaccccaccagtcagcaggtggtcctttaaacttctttc
aaacttaaccctctttttagcattctcgcatgaaaaagatgatgtaattg
caagcctcaaaaattacaaagagataagcattttcttgcctaaccaccca
tcttctgtgtttctaaacactcttttttctgacagttattcttttgccca
agatacagtgattcctccttgcttttctaatgatgcagttgctcttccct
gcttttgagtttgcagactttcatttcagaactgccccctgaacttcatg
atcaaagacaagccttccacctggaaatcaccactcatcttaaagacctg
tctgttcagaaaaaaggcagattttcagagaagtccaatctcttagttag
ggtttctattattgcaacaaaacactatgatcaacagcaagaggggaagg
aaaagttttattagtatatatttccacattgctgtttatcatgaaggaag
tcgtctgctctaacaggacagattccgggaggcagaagctgatgtgaagg
tca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_29635850_29636886
seq2: B6Ng01-051I01.b_46_1059 (reverse)

seq1  TTTTAAATTAGTTGAATCCATTTTATCCCTAACAAAACATGTTATGATTT  50
      ||||||||||||   |||    |||||| |||||||   || |||||  |
seq2  TTTTAAATTAGT--GATC---ATTATCCGTAACAAA--CTG-TATGA--T  40

seq1  TTCACTGGTCCTAATCCCTGGCTATCCTTGAAAAAGTTTAGAATTCTGTT  100
      |||| ||||||| || |||||||||| |   |||||||||||| |||| |
seq2  TTCA-TGGTCCT-ATTCCTGGCTATCGT--GAAAAGTTTAGAA-TCTG-T  84

seq1  ATTCTAGAGAATACAAAATGGTAAAAAAAAAAAAGTCCAGTTAATTTACA  150
      ||||| ||||||||||||||    |||||||||||||||||| |||||||
seq2  ATTCT-GAGAATACAAAATG---TAAAAAAAAAAGTCCAGTT-ATTTACA  129

seq1  TTTTCACTACCAATTATTATTTTAAGATTTATCAAAGTCTATGCTTATCT  200
      |||||||||||||| ||||||||||||||||||||||||||||| |||||
seq2  TTTTCACTACCAATAATTATTTTAAGATTTATCAAAGTCTATGC-TATCT  178

seq1  GTGTTTCTTTCTTTATGGTGTTTTGTTTTTTTCTTTTATCCATAAAAACA  250
      ||| ||||||| ||||||||||||||||||||| ||||||||||||||||
seq2  GTG-TTCTTTC-TTATGGTGTTTTGTTTTTTTC-TTTATCCATAAAAACA  225

seq1  ATTCTTTATTATTTAGAGGGTTAAAATAATGTTTTTGGCAGTGTGCTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTATTATTTAGAGGGTTAAAATAATGTTTTTGGCAGTGTGCTTTG  275

seq1  CAACTTTCTAGAATAATAATATTC-TTTTTAGCTTTTCTAGTAGATGTAA  349
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CAACTTTCTAGAATAATAATATTCTTTTTTAGCTTTTCTAGTAGATGTAA  325

seq1  AGTAAAGCCAATAAACATACAAATCAAATGTGCTTTTTTTGTTTATTTGT  399
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AGTAAAGCCAATAAATATACAAATCAAATGTGCTTTTTTTGTTTATTTGT  375

seq1  TTGTTTGTTTCTTTCTTTTTTTTTGTTTTTTGTTTTTTGTTTTTTAAATA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGTTTCTTTCTTTTTTTTTGTTTTTTGTTTTTTGTTTTTTAAATA  425

seq1  TGTTACTTAAAAGAAGTTGTCATTCGCCAGGCAGTGGTGGCACATGCCTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACTTAAAAGAAGTTGTCATTCGCCAGGCAGTGGTGGCACATGCCTT  475

seq1  TTGGGAGGCAGAGGCAGATGGATTTCTGAGTTTGAGACCAGCCTGGTCTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAGGCAGAGGCAGATGGATTTCTGAGTTTGAGACCAGCCTGGTCTA  525

seq1  CAGAGTGAGTTCCAGGAAAGCTATAGAGAGAAACCCTGTCTCGAAAAACA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTGAGTTCCAGGAAAGCTATAGAGAGAAACCCTGTCTCGAAAAACA  575

seq1  AAAAACCAAAACCAAAACCAAACCAAAAAAAAAAAAAAAAAAGAAGAAGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACCAAAACCAAAACCAAACCAAAAAAAAAAAAAAAAAAGAAGAAGA  625

seq1  AGAAGTTGTCATTCATGATGTTACGGGTAGACATATTCATAATTTCCTTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTTGTCATTCATGATGTTACGGGTAGACATATTCATAATTTCCTTA  675

seq1  CTATTTTAAAGTACATCATCTTATCCCACCAAAATGGAACATACTGACCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTAAAGTACATCATCTTATCCCACCAAAATGGAACATACTGACCC  725

seq1  GAGATAGTATTCCATCTCATGTTTTCTATATATGGCAAATTATCCTATTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATAGTATTCCATCTCATGTTTTCTATATATGGCAAATTATCCTATTA  775

seq1  GACACAGGTGTTTAATGATTTCTTTGTTTTCTCTGTCACTTGCTATGTTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACAGGTGTTTAATGATTTCTTTGTTTTCTCTGTCACTTGCTATGTTG  825

seq1  ACTCTGACATATGTATTAACCCGTGTTTCCAAACTTTTCATTGTGTCATT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGACATATGTATTAACCCGTGTTTCCAAACTTTTCATTGTGTCATT  875

seq1  TTTAGCCATCTACTAAGTCATGATAGCAAATAATATTTGGTAGTAGAGTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCCATCTACTAAGTCATGATAGCAAATAATATTTGGTAGTAGAGTT  925

seq1  TCCCCTGTATGACTTTTCCTTTATATTTCACCATTTTCAGGAA-TTGAGT  998
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TCCCCTGTATGACTTTTCCTTTATATTTCACCATTTTCAGGAAGTTGAGT  975

seq1  TTCTTCAGTTTTAAAACTAATCATGCTCTCAAAGAATTC  1037
      |||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCAGTTTTAAAACTAATCATGCTCTCAAAGAATTC  1014

seq1: chr10_29450786_29451841
seq2: B6Ng01-051I01.g_67_1119

seq1  GAATTCTTGCTGGCGAGATACTAGCTCGGGATATCAGACTTTTCAGTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGCTGGCGAGATACTAGCTCGGGATATCAGACTTTTCAGTTTG  50

seq1  TTTTGTGATCTTTAGTCTTCATCTCTGATCTAGGATTAGATGTAACTCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTGATCTTTAGTCTTCATCTCTGATCTAGGATTAGATGTAACTCAA  100

seq1  GAGCACACAAAAAACACCTAAGAGAAAAACTGTGAAGTTTTTGAGTATCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCACACAAAAAACACCTAAGAGAAAAACTGTGAAGTTTTTGAGTATCC  150

seq1  CAGATTCTGCCTTTACTGCTCTGGTCAGACCTTCATTTGACCCAGAAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTCTGCCTTTACTGCTCTGGTCAGACCTTCATTTGACCCAGAAATT  200

seq1  TTCTACTTATACAGGTCAAGTAAGTATTTAAGGGGCTTCTCTGGTATTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACTTATACAGGTCAAGTAAGTATTTAAGGGGCTTCTCTGGTATTCT  250

seq1  TATTTTTTCTAAGCTTGACATGACTTTTGCCACCATGAATTAGAGTTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTTCTAAGCTTGACATGACTTTTGCCACCATGAATTAGAGTTCCT  300

seq1  ATGGAGGCCGACAGAATACCTCAGTCCAAAAGTTTGCCCTATGATTGGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGGCCGACAGAATACCTCAGTCCAAAAGTTTGCCCTATGATTGGGG  350

seq1  TTTGAATCAGGTACTAGAGGTTCAGAAGTCAGCACTTAGAACAACTTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAATCAGGTACTAGAGGTTCAGAAGTCAGCACTTAGAACAACTTTCA  400

seq1  AAAATCAAAATTGTCTACTATGGATAGATTAGAATACTTAACATTTTATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCAAAATTGTCTACTATGGATAGATTAGAATACTTAACATTTTATA  450

seq1  TGTTTTAGACTTTTGTAAATATTTTCTTTCAGTAGCATCAAGAAGTAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTAGACTTTTGTAAATATTTTCTTTCAGTAGCATCAAGAAGTAGAT  500

seq1  AACTACTCTTGTACCCCACCAGTCAGCAGGTGGTCCTTTAAACTTCTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTACTCTTGTACCCCACCAGTCAGCAGGTGGTCCTTTAAACTTCTTTC  550

seq1  AAACTTAACCCTCTTTTTAGCATTCTCGCATGAAAAAGATGATGTAATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTAACCCTCTTTTTAGCATTCTCGCATGAAAAAGATGATGTAATTG  600

seq1  CAAGCCTCAAAAATTACAAAGAGATAAGCATTTTCTTGCCTAACCACCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCTCAAAAATTACAAAGAGATAAGCATTTTCTTGCCTAACCACCCA  650

seq1  TCTTCTGTGTTTCTAAACACTCTTTTTTCTGACAGTTATTCTTTTGCCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTGTGTTTCTAAACACTCTTTTTTCTGACAGTTATTCTTTTGCCCA  700

seq1  AGATACAGTGATTCCTCCTTGCTTTTCTAATGATGCAGTTGCTCTTCCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACAGTGATTCCTCCTTGCTTTTCTAATGATGCAGTTGCTCTTCCCT  750

seq1  GCTTTTGAGTTTGCAGACTTTCATTTCAGAACTGCCCCCTGAACTTCATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTGAGTTTGCAGACTTTCATTTCAGAACTGCCCCCTGAACTTCATG  800

seq1  ATCAAAGACAAGCCTTCCACCTGGAAATCACCACTCATCTTAAAGACCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAGACAAGCCTTCCACCTGGAAATCACCACTCATCTTAAAGACCTG  850

seq1  TCTGTTCAG-AAAAAGGCAGATTTTCAGAGAAGTCCAATCTCTTAGTTAG  899
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTCAGAAAAAAGGCAGATTTTCAGAGAAGTCCAATCTCTTAGTTAG  900

seq1  GGTTTCTATTATTGCAACAAAACACTATGATCAAACAGCAAGAGGGGAAG  949
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GGTTTCTATTATTGCAACAAAACACTATGATC-AACAGCAAGAGGGGAAG  949

seq1  GAAAAGTTTTATTTAGTATATATTTCCACATTGCTGTTTATCATGAAAGA  999
      ||||||||||| ||||||||||||||||||||||||||||||||||| ||
seq2  GAAAAGTTTTA-TTAGTATATATTTCCACATTGCTGTTTATCATGAAGGA  998

seq1  AGGTCGTTCTGCTCTAACAGGACAGGATCCCGGAGGCAGGAGCTGATGTA  1049
      | |||| ||||||||||||||||||  ||| |||||||| ||||||||| 
seq2  A-GTCG-TCTGCTCTAACAGGACAGATTCCGGGAGGCAGAAGCTGATGTG  1046

seq1  GAGGTCA  1056
       ||||||
seq2  AAGGTCA  1053