BAC Information

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BAC

Clone NameB6Ng01-051L08
Chromosome10 (Build37)
Map Location 16,924,557 - 16,925,711
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC382457, LOC546472, LOC100039576, LOC627511
Downstream geneCited2, Txlnb, LOC665321, Heca, 3110003A17Rik, Reps1, LOC100039660
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051L08.bB6Ng01-051L08.g
ACCDH875270DH875271
length7171,112
definitionDH875270|Mus musculus domesticus DNA, BAC clone: B6Ng01-051L08, 5' end.DH875271|Mus musculus domesticus DNA, BAC clone: B6Ng01-051L08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatgaaattcttgggcaaattgatatatctggaagatatcatcct
gagtgaggtaacccaatcacaaaagaagtcacttgatatgcacttactga
taagtggatattagcccagaaacctagaatacccaagatgcaccttccaa
aacacaagaaaatcatgaaggaacaccaacgtgtggatacctcattcctc
cctagaataaggaataagatttccatggaaggagttgcagagacaaagtt
tggagctaagacaaaaggatggaccatccagagactgcccactcaggggt
ccatcccataatcagccactaaactcagacactattgcatatgccagcaa
gattttgctgaagggaccctgatatagctgtctcctatgaggctttgcca
gcgcctggcaaatacagaagcagatgctcacagttatctataggatggaa
cacagggccccaatataggagctagaaaaagtacccaagagctgaagggt
tctgcaaccatataagtggaacaacaatatgaactaaccagtacccccgg
agctcctgtctctagctgcatatgtagcagaagatggcctagtcagccat
cactgggaagagaggccccttggtctagcaaactttatatgccacattac
aggtaaatgccagggccaagaagtgggaatgagtgggtaggggagcaggg
cagggggaaggtatagg

gaattccttcatcattcgtgcataaacccttggcaagtgcctatgattta
ctcagtgcatgaatagggatagccattcccgaaagtataagactttaatg
catttaatattgaagcatttcctaaacccacgtttactcaagtctgatcc
ctgagctgattccttatcaaatgcaaggttttgatagattaataatctgt
attcttgaaaagttataaaatggttaaattttgtaaaatctaaaagctat
tattaaccaacactgtattttaattttgatttgttttcccctaatgagat
gaaaagcagcaatttgacatttagcctcactgcagtgaattctctgtggc
tctctgctgtcactgttcgcctctcttttgggtttctgtgtctggtacaa
gtttgttcttcctccagtatccaggtcttttggaattttgatgacagtaa
ggtttaagcacaattgaaaagagaatccaaaatgaactttctgccccttc
aatctaacaaaagacacaacaacaacaacaacaacaacaaaggagccacc
ggaggcattgtgtaatgacttagagcaatggttctcaaccttcctaatgc
tgcaaccctctcataccattcctcatgttgtggtgacccacaactatgga
attattttgttgctacttcataactgtgattttgctactgtaactatctg
atatatggtatacaacctctctgaaagagtcattcaaccctcacaggggt
tgagacccacaggttgagaaacactaacttagagggtgtgtgcagcaaaa
tagctaatttccttgagagaaaaacaaacaacaaacaaacaaacaaaaaa
caaacaaaaacaaaacttttggtgtctggagcagaggacttaactttatt
tactggagatatattcactaaataaatgtagaatttcatggtctcattgg
tttagtagtaataactttttttttttactttgaactttttcatgaaatct
actgggagtactatgtaagctgctgacattgtcgtgagctagttcctttt
agattctcaagaaaccatgctgctctatactctacagagttccaatcagc
tactcttctttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_16924557_16925711
seq2: B6Ng01-051L08.g_66_1177 (reverse)

seq1  GAAAGAAAGAGTAGCCTGATGTGGGAACTCTGTAGGAGTATAGGAGGCAG  50
      ||||| |||||||| ||||  | ||||||||||| ||||||||   ||||
seq2  GAAAG-AAGAGTAG-CTGA--TTGGAACTCTGTA-GAGTATAG--AGCAG  43

seq1  CATGTGTTTCTCTGAGAATCCCTAAAAAGGGACTAGCTCAACGGAACAAT  100
      |||| |||||| ||||||||    |||||| |||||||| |||  |||||
seq2  CATG-GTTTCT-TGAGAATC---TAAAAGGAACTAGCTC-ACG--ACAAT  85

seq1  GGTCAGCAGCCTTACATTAGGTACTCCCAGGTAGATTTTCATTTGAAAAA  150
       |||||||| |||||||   ||||||||| ||||| ||||||    ||||
seq2  -GTCAGCAG-CTTACAT--AGTACTCCCA-GTAGA-TTTCAT---GAAAA  126

seq1  AGTTTCAAAAGTTAAAAAAAAAAAAGTTATTTACCTACTTAAACCAATGG  200
      ||||   |||||  |||||||||||||||||   |||| ||||||||| |
seq2  AGTT--CAAAGT--AAAAAAAAAAAGTTATT--ACTAC-TAAACCAAT-G  168

seq1  AGACCATTGAATTTCTACATTTATTTAGTGAATATTATCTCCAGGTAAAT  250
      |||||| |||| |||||||||||||||||||||| |||||||| ||||||
seq2  AGACCA-TGAAATTCTACATTTATTTAGTGAATA-TATCTCCA-GTAAAT  215

seq1  AAAGTTAAGTCCCTCTGCTCCAGACACCAAAAGTTTTTTGTTTTTTGTTT  300
      |||||||||| ||||||||||||||||||||||||||    |||||||||
seq2  AAAGTTAAGT-CCTCTGCTCCAGACACCAAAAGTTTT---GTTTTTGTTT  261

seq1  GTTTTTTTGTTTGTTTGTTTGTTTGTTTTGTTTTTTCTCTCAAGGAAATT  350
      | ||||||||||||||||||| ||||||   |||||||||||||||||||
seq2  G-TTTTTTGTTTGTTTGTTTG-TTGTTT--GTTTTTCTCTCAAGGAAATT  307

seq1  AGCTATTTTGCTGCACACACCCTCTAAGTTAGTGTTTCTCAACCTGTGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATTTTGCTGCACACACCCTCTAAGTTAGTGTTTCTCAACCTGTGGG  357

seq1  TCTCAACCCCTGTGAGGGTTGAATGACTCTTTCAGAGAGGTTGTATACCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAACCCCTGTGAGGGTTGAATGACTCTTTCAGAGAGGTTGTATACCA  407

seq1  TATATCAGATAGTTACAGTAGCAAAATCACAGTTATGAAGTAGCAACAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCAGATAGTTACAGTAGCAAAATCACAGTTATGAAGTAGCAACAAA  457

seq1  ATAATTCCATAGTTGTGGGTCACCACAACATGAGGAATGGTATGAGAGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTCCATAGTTGTGGGTCACCACAACATGAGGAATGGTATGAGAGGG  507

seq1  TTGCAGCATTAGGAAGGTTGAGAACCATTGCTCTAAGTCATTACACAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGCATTAGGAAGGTTGAGAACCATTGCTCTAAGTCATTACACAATG  557

seq1  CCTCCGGTGGCTCCTTTGTTGTTGTTGTTGTTGTTGTTGTGTCTTTTGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCGGTGGCTCCTTTGTTGTTGTTGTTGTTGTTGTTGTGTCTTTTGTT  607

seq1  AGATTGAAGGGGCAGAAAGTTCATTTTGGATTCTCTTTTCAATTGTGCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGAAGGGGCAGAAAGTTCATTTTGGATTCTCTTTTCAATTGTGCTT  657

seq1  AAACCTTACTGTCATCAAAATTCCAAAAGACCTGGATACTGGAGGAAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTTACTGTCATCAAAATTCCAAAAGACCTGGATACTGGAGGAAGAA  707

seq1  CAAACTTGTACCAGACACAGAAACCCAAAAGAGAGGCGAACAGTGACAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTTGTACCAGACACAGAAACCCAAAAGAGAGGCGAACAGTGACAGC  757

seq1  AGAGAGCCACAGAGAATTCACTGCAGTGAGGCTAAATGTCAAATTGCTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGCCACAGAGAATTCACTGCAGTGAGGCTAAATGTCAAATTGCTGC  807

seq1  TTTTCATCTCATTAGGGGAAAACAAATCAAAATTAAAATACAGTGTTGGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATCTCATTAGGGGAAAACAAATCAAAATTAAAATACAGTGTTGGT  857

seq1  TAATAATAGCTTTTAGATTTTACAAAATTTAACCATTTTATAACTTTTCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATAGCTTTTAGATTTTACAAAATTTAACCATTTTATAACTTTTCA  907

seq1  AGAATACAGATTATTAATCTATCAAAACCTTGCATTTGATAAGGAATCAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATACAGATTATTAATCTATCAAAACCTTGCATTTGATAAGGAATCAG  957

seq1  CTCAGGGATCAGACTTGAGTAAACGTGGGTTTAGGAAATGCTTCAATATT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGGATCAGACTTGAGTAAACGTGGGTTTAGGAAATGCTTCAATATT  1007

seq1  AAATGCATTAAAGTCTTATACTTTCGGGAATGGCTATCCCTATTCATGCA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCATTAAAGTCTTATACTTTCGGGAATGGCTATCCCTATTCATGCA  1057

seq1  CTGAGTAAATCATAGGCACTTGCCAAGGGTTTATGCACGAATGATGAAGG  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTAAATCATAGGCACTTGCCAAGGGTTTATGCACGAATGATGAAGG  1107

seq1  AATTC  1155
      |||||
seq2  AATTC  1112


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