BAC Information

Click to search

BAC

Clone NameB6Ng01-052G24
Chromosome10 (Build37)
Map Location 64,951,148 - 64,952,324
singlet/doubletsinglet
Overlap genenone
Upstream geneCtnna3, LOC665206
Downstream geneLOC216036, 1700023F02Rik, 4930407I19Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-052G24.bB6Ng01-052G24.g
ACCDH875795DH875796
length1,0851,143
definitionDH875795|Mus musculus domesticus DNA, BAC clone: B6Ng01-052G24, 5' end.DH875796|Mus musculus domesticus DNA, BAC clone: B6Ng01-052G24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatacgaatggctgagaagcacctgaaaaaatgt
tcatcatccttaatcaacagagaaatgcaaatcaaaacaaccgtgagatt
ccatctcacaccagtctgaatggctaagatcaaaaattcaagtgacagca
gatgctggtgaggatgtggaaaaagaggaacactcctccattgttgggtg
gattgcaagcttgtacaaccactctggaaatcagtctggcagttcctcag
aaaattggacatagtactacaggatgatcccacaatacctctcctgggca
tatatccagaagatgtcccattgggtaagaaggacacatgctccactatg
ttcatagcagccttatttataatagccagaagttagaaaggacccaggtg
cccctcaacagaggaatggatacaaaaaatgtggtacagttacacaatgg
agtactacttagctattaaaaagaatgaatttgtgaaattcctaggcaaa
tgcttggacctggagggcatcatcctgagtgaggtaacacaatcacaaaa
gaactcaaatggtatgtactcactgataagtggatattagcccagaaact
tagtatagtgagatataaggtacaatttgctaaacacaaaaaactgaaga
agaacgaagaccaaagtgtgaacacttttgccccttcttagaattggaaa
cattcacccatggaaggagttacagagacaaagtttggagctgagacaaa
aggattgaccatctagagactccatatccaggggatccatcccataatta
gcctccaaatgatgacaccactgcatacactagcaaaagttgttgcaagg
accgtgatatagctatttcttgtgagactaggccagggcctagcaaacac
agaagtggatgctcacagtcaactattggatggatcacagtgccccaatg
gtggagctgagaaagtatccaaggagctaaagagatctgcaaccctgtag
gtgcaaacttatgactaaccagttaccttgagctttgaatctagctgcaa
tgatatcaaagaagtgtctgagccggccttcattg
gaattcagtttcggattcttgctttgatgccctggcatctagctgtgcca
cactttctactgtgcctgcatgttctccactgactacagagaacactgaa
aacaaataaaaagggagccattcaactttcagtaagtcttataaatctat
aagaaaaacatggaactttattaattttaccatccttcaaaatacccaaa
gtactgttccataaatttatttctatgtatgcacaaaatattagtgtaca
ataataaactatactacgtggttcagaaggaacacttttgtatgcaatca
aatgtatgcaattagaaaactcaatatgtaactgatatactttctatata
gctccctacaaaattagtcttaaatctgcctttgctgcaggctatagaat
gatgtgctgacagtccataataattgaatgaatacttcctataattattt
ctaacagtgatgtagtatgaaactaatatgtgtctgtttcaaaatgtact
tccaacttctacttttgatataacttcaagaaggttaattagccctggca
agttttaatttccttctctataaaggaatgaggtagttattctgaagatc
aagagtgaaccatttgaataaaggaagttaatctagtaccaagtacactg
gaagcactcagtaatgctactgaatcattaataacaacacaatccacgga
gggagatatcaaaatttcactagccactcacataatatctgtattttcag
ccatgccctgttataaccttactctgattgcatatatgtctttgtaccac
atgaatgtctgatgctcactgagaccagaagagggcaccatatcccctgc
aactggaaggacagatagttgtgggtttgccgtatgagtttgaactgtac
ttgggtcctttggaagaataaccagtgtctttaacttaatccttctcaaa
taagcagatttttgtacgtctttccatgtatgtcctggtatattttttgt
aagtagatttacagtaaaatagtaacatatttaaaaatgacttttatcaa
attgctacaaatcttgactagtagtatagaccagagttgatcagaccagg
aaagtcgagacttatttgttctcacccccagcattgatactgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_64951148_64952324
seq2: B6Ng01-052G24.g_69_1211

seq1  GAATTCAGTTTCGGATTCTTGCTTTGATGCCCTGGCATCTAGCTGTGCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTTCGGATTCTTGCTTTGATGCCCTGGCATCTAGCTGTGCCA  50

seq1  CACTTTCTACTGTGCCTGCATGTTCTCCACTGACTACAGAGAACACTGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTCTACTGTGCCTGCATGTTCTCCACTGACTACAGAGAACACTGAA  100

seq1  AACAAATAAAAAGGGAGCCATTCAACTTTCAGTAAGTCTTATAAATCTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAATAAAAAGGGAGCCATTCAACTTTCAGTAAGTCTTATAAATCTAT  150

seq1  AAGAAAAACATGGAACTTTATTAATTTTACCATCCTTCAAAATACCCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAACATGGAACTTTATTAATTTTACCATCCTTCAAAATACCCAAA  200

seq1  GTACTGTTCCATAAATTTATTTCTATGTATGCACAAAATATTAGTGTACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGTTCCATAAATTTATTTCTATGTATGCACAAAATATTAGTGTACA  250

seq1  ATAATAAACTATACTACGTGGTTCAGAAGGAACACTTTTGTATGCAATCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAAACTATACTACGTGGTTCAGAAGGAACACTTTTGTATGCAATCA  300

seq1  AATGTATGCAATTAGAAAACTCAATATGTAACTGATATACTTTCTATATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTATGCAATTAGAAAACTCAATATGTAACTGATATACTTTCTATATA  350

seq1  GCTCCCTACAAAATTAGTCTTAAATCTGCCTTTGCTGCAGGCTATAGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCTACAAAATTAGTCTTAAATCTGCCTTTGCTGCAGGCTATAGAAT  400

seq1  GATGTGCTGACAGTCCATAATAATTGAATGAATACTTCCTATAATTATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGCTGACAGTCCATAATAATTGAATGAATACTTCCTATAATTATTT  450

seq1  CTAACAGTGATGTAGTATGAAACTAATATGTGTCTGTTTCAAAATGTACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACAGTGATGTAGTATGAAACTAATATGTGTCTGTTTCAAAATGTACT  500

seq1  TCCAACTTCTACTTTTGATATAACTTCAAGAAGGTTAATTAGCCCTGGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACTTCTACTTTTGATATAACTTCAAGAAGGTTAATTAGCCCTGGCA  550

seq1  AGTTTTAATTTCCTTCTCTATAAAGGAATGAGGTAGTTATTCTGAAGATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTAATTTCCTTCTCTATAAAGGAATGAGGTAGTTATTCTGAAGATC  600

seq1  AAGAGTGAACCATTTGAATAAAGGAAGTTAATCTAGTACCAAGTACACTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTGAACCATTTGAATAAAGGAAGTTAATCTAGTACCAAGTACACTG  650

seq1  GAAGCACTCAGTAATGCTACTGAATCATTAATAACAACACAATCCACGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCACTCAGTAATGCTACTGAATCATTAATAACAACACAATCCACGGA  700

seq1  GGGAGATATCAAAATTTCACTAGCCACTCACATAATATCTGTATTTTCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGATATCAAAATTTCACTAGCCACTCACATAATATCTGTATTTTCAG  750

seq1  CCATGCCCTGTTATAACCTTACTCTGATTGCATATATGTCTTTGTACCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCCCTGTTATAACCTTACTCTGATTGCATATATGTCTTTGTACCAC  800

seq1  ATGAATGTCTGATGCTCACTGAGACCAGAAGAAGGCACCATATCCCCTGC  850
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ATGAATGTCTGATGCTCACTGAGACCAGAAGAGGGCACCATATCCCCTGC  850

seq1  AACTGGAAGGACAGATAGTTGTGGG-TTGCCGTATGAGTTTGAACTGTAC  899
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AACTGGAAGGACAGATAGTTGTGGGTTTGCCGTATGAGTTTGAACTGTAC  900

seq1  TTGGGTCCTTTGGAAGAATAACCAGTGTTCTTAACCTTAATCCTTCTCAA  949
      ||||||||||||||||||||||||||| |||| | |||||||||||||||
seq2  TTGGGTCCTTTGGAAGAATAACCAGTG-TCTTTAACTTAATCCTTCTCAA  949

seq1  ATAAGCAGGATTTTATGTACGTCTTTCCATGTATGTCCTTGGTATTATTT  999
      ||||||| |||||| |||||||||||||||||||||||| |    ||| |
seq2  ATAAGCA-GATTTT-TGTACGTCTTTCCATGTATGTCCTGG----TATAT  993

seq1  TTTTTGTAAGTAGAATTTTACAGTAAAATAGTACACATATTAAAAAAATT  1049
      ||||||||||||||  ||||||||||||||||| ||||||| |||||  |
seq2  TTTTTGTAAGTAGA--TTTACAGTAAAATAGTA-ACATATTTAAAAA--T  1038

seq1  GAACCTTTTTATCAAATTGCTACAAAATTCTTTGACTAGTAGTATAAGAC  1099
      ||    ||||||||||||||||||||  || |||||||||||||| ||||
seq2  GA---CTTTTATCAAATTGCTACAAA--TC-TTGACTAGTAGTAT-AGAC  1081

seq1  CAGAAAGTTGAAATTCTAGAACCCACAGAGAAAGTC-AGACATTATTTTG  1148
      |||  ||||||   || |||  |||    ||||||| |||| ||||||  
seq2  CAG--AGTTGA---TC-AGA--CCA---GGAAAGTCGAGAC-TTATTTGT  1119

seq1  TTTCTACAACCCCCAGCATTGAATACTGG  1177
      | ||    ||||||||||||| |||||||
seq2  TCTC----ACCCCCAGCATTG-ATACTGG  1143