BAC Information

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BAC

Clone NameB6Ng01-052J23
Chromosome10 (Build37)
Map Location 49,032,662 - 49,033,406
singlet/doubletsinglet
Overlap geneGrik2
Upstream geneLOC546562, LOC100041689
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-052J23.bB6Ng01-052J23.g
ACCDH875918DH875919
length9641,169
definitionDH875918|Mus musculus domesticus DNA, BAC clone: B6Ng01-052J23, 5' end.DH875919|Mus musculus domesticus DNA, BAC clone: B6Ng01-052J23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacttgtgactctaaccatccactctgcaaccccaatgcgtttct
atgattgacggccccagagaaagatctattcaagctgcctttctgtagat
tcccaagggtagaccacatatcctagcaattagtatctgctgaagtcatt
gcaaaagtgaagagaaatgcttgggtttctatgtgataattagagtactt
actcacagtccttgtctccctttgctggtggttatactagaagccacctg
tcatggtttgtatattcttggaccagggagtggcaccatttggaggtgag
gccttgttggaatagatgtgacctggttagagtaggtttgtcactgtggg
tgtgggcttaaaaccctcatgctagttgccaggaagtcagtcttccacta
ccagcctttggatgaagacatagaactctcagttctgcctgtgcctagat
actgccatgctcccactttgatgataatggactgaacctctgaacctgta
agccaaccccaattaagtgttgttttttttataagacttgccttggtcat
ggtgtctgttcatagcagtaaaactgtgactctgactaatatagaagttg
gtaccagggaatggggtgttgctatgatagccctgaccatgcttttattt
gaaagaatgtggattttgggactttgtatttagaaagcagtgaaatgctt
taaatggggcttaatgggctatcctagtaggaatatggatgactttgttg
ctgggagtaatttgaactgtgttgacctggcccaagaaatttcaaaggag
aagaatttcagaatgtggcataaagactgtttttatggtattttggtgaa
gaatgtggctatgttttgcccttgtctgaaagtttgcctgaggctaagtg
agagactcagattaattccattacaaaggagtttcaaaaagctcagcaga
gactttgtactctg
gaattctttgtttagctctgcactccattgataataggactatttggttc
tctggagtctaacttcttgaattctttgtatatattagatattagccctc
tatcagatgtaggattggtaaagatcttttcccaatctgtaggttgctgt
ttggcctgatgacaatgtactttgcctaacagaaacttttaaactttata
agatcttatttgtccctagttgatcttagaggctgggccattggtattct
gttcaggaaaatttaccctgtgctgatgtgtgcaatttctcttctactag
attcagtgtattggattttatgtgtaggtctttgaccacttggatttgat
atttgtacaaggggataagaacagattaatttgaacaattttacatgctg
agcaccattgaactagcaccatttgttgaatatgctatatttgttctcac
tggaaagttttggcttgtcaaaattcaggtgagaataggtgtgtaggttt
aattctgagtcttcaattttattctattgtactacctgcctgtctctgta
tcaatgccatgcagtttttatcactaatgatctgtaatacatcttgaggt
aagggatggtgattcctccagaagttcttttattgttgagaagagttttt
gctatcctgggtattttgttattccagatgaatttgagaattgctctgtc
tatctctgtgaagaattgagttgatattttgatggggattgcattggatc
tgtagattgcttttggtaagatggcatttttaatatgttaattctgccga
tatatgagcaggggaaaatttaccatcttctgaggccttcttagatttct
atcttcagagacttgaagttcttgtcctacagatatttttgtgttttggt
tagtgtcacaccaaaatatttcatatagtttttgactattttgaagggtg
tcatttcataatatctttctcatcctgtttatccattgagtagaggagtc
tactgatgtgttttagttcattttatttccagccactttgttgaagctgc
ttatcagatggaaggagttctctgggggaaattccggggtcactcagaat
catacaatcacaattccagtagggatattgacctcttcccttgaccacct
ctggtgctcaatggggtca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_49032662_49033406
seq2: B6Ng01-052J23.b_44_788

seq1  GAATTCACTTGTGACTCTAACCATCCACTCTGCAACCCCAATGCGTTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTGTGACTCTAACCATCCACTCTGCAACCCCAATGCGTTTCT  50

seq1  ATGATTGACGGCCCCAGAGAAAGATCTATTCAAGCTGCCTTTCTGTAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTGACGGCCCCAGAGAAAGATCTATTCAAGCTGCCTTTCTGTAGAT  100

seq1  TCCCAAGGGTAGACCACATATCCTAGCAATTAGTATCTGCTGAAGTCATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAGGGTAGACCACATATCCTAGCAATTAGTATCTGCTGAAGTCATT  150

seq1  GCAAAAGTGAAGAGAAATGCTTGGGTTTCTATGTGATAATTAGAGTACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAAGTGAAGAGAAATGCTTGGGTTTCTATGTGATAATTAGAGTACTT  200

seq1  ACTCACAGTCCTTGTCTCCCTTTGCTGGTGGTTATACTAGAAGCCACCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACAGTCCTTGTCTCCCTTTGCTGGTGGTTATACTAGAAGCCACCTG  250

seq1  TCATGGTTTGTATATTCTTGGACCAGGGAGTGGCACCATTTGGAGGTGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGTTTGTATATTCTTGGACCAGGGAGTGGCACCATTTGGAGGTGAG  300

seq1  GCCTTGTTGGAATAGATGTGACCTGGTTAGAGTAGGTTTGTCACTGTGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGTTGGAATAGATGTGACCTGGTTAGAGTAGGTTTGTCACTGTGGG  350

seq1  TGTGGGCTTAAAACCCTCATGCTAGTTGCCAGGAAGTCAGTCTTCCACTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGCTTAAAACCCTCATGCTAGTTGCCAGGAAGTCAGTCTTCCACTA  400

seq1  CCAGCCTTTGGATGAAGACATAGAACTCTCAGTTCTGCCTGTGCCTAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCTTTGGATGAAGACATAGAACTCTCAGTTCTGCCTGTGCCTAGAT  450

seq1  ACTGCCATGCTCCCACTTTGATGATAATGGACTGAACCTCTGAACCTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCATGCTCCCACTTTGATGATAATGGACTGAACCTCTGAACCTGTA  500

seq1  AGCCAACCCCAATTAAGTGTTGTTTTTTTTATAAGACTTGCCTTGGTCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAACCCCAATTAAGTGTTGTTTTTTTTATAAGACTTGCCTTGGTCAT  550

seq1  GGTGTCTGTTCATAGCAGTAAAACTGTGACTCTGACTAATATAGAAGTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCTGTTCATAGCAGTAAAACTGTGACTCTGACTAATATAGAAGTTG  600

seq1  GTACCAGGGAATGGGGTGTTGCTATGATAGCCCTGACCATGCTTTTATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCAGGGAATGGGGTGTTGCTATGATAGCCCTGACCATGCTTTTATTT  650

seq1  GAAAGAATGTGGATTTTGGGACTTTGTATTTAGAAAGCAGTGAAATGCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAATGTGGATTTTGGGACTTTGTATTTAGAAAGCAGTGAAATGCTT  700

seq1  TAAATGGGGCTTAATGGGCTATCCTAGTAGGAATATGGATGACTT  745
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGGGGCTTAATGGGCTATCCTAGTAGGAATATGGATGACTT  745