BAC Information

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BAC

Clone NameB6Ng01-052M05
Chromosome10 (Build37)18 (Build37)
Map Location 104,055,174 - 104,055,27662,258,950 - 62,259,583
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-052M05.bB6Ng01-052M05.g
ACCDH876019DH876020
length423632
definitionDH876019|Mus musculus domesticus DNA, BAC clone: B6Ng01-052M05, 5' end.DH876020|Mus musculus domesticus DNA, BAC clone: B6Ng01-052M05, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,055,174 - 104,055,276)(62,258,950 - 62,259,583)
sequence
tttgttcagctctgagccccattttttaatggggttatttgattttctgg
agtccaccttcttgagttttttatatatattggatattagtcccctatca
gatttagggttggtaaaaattctttcccaatctgttggtgctcttttcgt
cttattgacagtatcttttgccttacagaagctttgcaattttatgaggt
cccatttgtcgattcctgatcttacagcacaagccattgctgttctgttc
aataattttttcccctgtggccatatctttgaggcttttctccactttct
cctctataaattccattgtcaaggaagtgaaagatctgtatgataagaac
ttcaagtctctgaagaaagaaattaaagaagatctcagaagatgggaaga
tctcccatgctcatggattggca
gaattccatagaaaacaaagagtttgttgtggttcaagatcgccaaaggt
ggttggttggcagtggagacctagcgtggggagtccagggatgggaggac
tgccttcctctggcttccacatccacaccagttcacatgtattgctggag
ttagatgttctgggttactgaaggccatcaccatgcagagccatgcatgt
gggatagggttagagttaaggaggtaagcagatgatttaacgacatatcc
aggttagaacactgcacagcgcctgacacatagagacacatgacattggt
cagctgtcatggatgacctccactttcatttttcatcggacattttattt
tccctgacaccgtggaaagcgctggctgggataacttgtcagtttaagtt
ttcacacaagtgggatttctttcttgcctcctgtttataaagcaaacact
tgttgaggccctactgcctttcagattcctcttggcagcacctgtaatgg
aatggtccttaaggatgcagagtcatctactggaggggaggagagtatgt
gtggttagagctgaggaggcagggaagggtggccttccttactaattttg
tattttggaatatgtgggaaatttctgactag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104055174_104055276
seq2: B6Ng01-052M05.b_369_471 (reverse)

seq1  TGCCGATCCATGAGCATGGGAGATCTTTCCATCTTCTGAGATCTTCTTTA  50
      |||| |||||||||||||||||||||| ||||||||||||||||||||||
seq2  TGCCAATCCATGAGCATGGGAGATCTTCCCATCTTCTGAGATCTTCTTTA  50

seq1  ATTTCTTTCTTCAGAGACATGAAGTTCTTGTCATACAGATCTTTCACTTC  100
      |||||||||||||||||| |||||||||| ||||||||||||||||||||
seq2  ATTTCTTTCTTCAGAGACTTGAAGTTCTTATCATACAGATCTTTCACTTC  100

seq1  CTT  103
      |||
seq2  CTT  103

seq1: chr18_62258950_62259583
seq2: B6Ng01-052M05.g_67_698

seq1  GAATTCCATAGAAAACAAAGAGTTTGTTGTGGTTCAAGATCGCCAAAGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAGAAAACAAAGAGTTTGTTGTGGTTCAAGATCGCCAAAGGT  50

seq1  GGTTGGTTGGCAGTGGAGACCTAGCGTGGGGAGTCCAGGGATGGGAGGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGTTGGCAGTGGAGACCTAGCGTGGGGAGTCCAGGGATGGGAGGAC  100

seq1  TGCCTTCCTCTGGCTTCCACATCCACACCAGTTCACATGTATTGCTGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTCCTCTGGCTTCCACATCCACACCAGTTCACATGTATTGCTGGAG  150

seq1  TTAGATGTTCTGGGTTACTGAAGGCCATCACCATGCAGAGCCATGCATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATGTTCTGGGTTACTGAAGGCCATCACCATGCAGAGCCATGCATGT  200

seq1  GGGATAGGGTTAGAGTTAAGGAGGTAAGCAGATGATTTAACGACATATCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATAGGGTTAGAGTTAAGGAGGTAAGCAGATGATTTAACGACATATCC  250

seq1  AGGTTAGAACACTGCACAGCGCCTGACACATAGAGACACATGACATTGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTAGAACACTGCACAGCGCCTGACACATAGAGACACATGACATTGGT  300

seq1  CAGCTGTCATGGATGACCTCCACTTTCATTTTTCATCGGACATTTTATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGTCATGGATGACCTCCACTTTCATTTTTCATCGGACATTTTATTT  350

seq1  TCCCTGACACCGTGGAAAGCGCTGGCTGGGATAACTTGTCAGTTTAAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGACACCGTGGAAAGCGCTGGCTGGGATAACTTGTCAGTTTAAGTT  400

seq1  TTCACACAAGTGGGATTTCTTTCTTGCCTCCTGTTTATAAAGCAAACACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACACAAGTGGGATTTCTTTCTTGCCTCCTGTTTATAAAGCAAACACT  450

seq1  TGTTGAGGCCCTACTGCCTTTCAGATTCCTCTTGGCAGCACCTGTAATGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAGGCCCTACTGCCTTTCAGATTCCTCTTGGCAGCACCTGTAATGG  500

seq1  AATGGTCCTTAAGGATGCAGAGTCATCTACTGGAGGGGAGGAGAGTATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTCCTTAAGGATGCAGAGTCATCTACTGGAGGGGAGGAGAGTATGT  550

seq1  GTGGTTAGAGCTGAGGAGGCAGGGAAGGGTGGCCTTCCTTGACTATTTTT  600
      |||||||||||||||||||||||||||||||||||||||| |||| ||||
seq2  GTGGTTAGAGCTGAGGAGGCAGGGAAGGGTGGCCTTCCTT-ACTAATTTT  599

seq1  GTAGTTTGGAATATTGAGGGAAATCTCTGACTAG  634
      ||| ||||||||| || ||||||| |||||||||
seq2  GTATTTTGGAATA-TGTGGGAAATTTCTGACTAG  632