BAC Information

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BAC

Clone NameB6Ng01-053K07
Chromosome10 (Build37)
Map Location 104,053,904 - 104,054,363
singlet/doubletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-053K07.bB6Ng01-053K07.g
ACCDH876635DH876636
length848350
definitionDH876635|Mus musculus domesticus DNA, BAC clone: B6Ng01-053K07, 5' end.DH876636|Mus musculus domesticus DNA, BAC clone: B6Ng01-053K07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaaagcaaatcaaaacaacactgagat
tccacctcacaccagttagaatggctaagataaaaatttcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtataaccactctggaaatcagtttggcggttcctca
gaaaactggacatagtactactggaggatcccacaataccactcctgggc
atatatccagaagatgtcccaaccggtcagaaggacacatgctccactac
gttcatagcagccttatttataatagccagaagctggaaagaaaccagat
gcccctcaacagaggaatggatacagaaaatgttgtacatttacacaatg
gagtactactcagctattaagaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaatccaatcacaaa
ggaactcacacactatgtactcattgataagtggatattagcccagaaac
ttaggatactcaagatataagatacaattttctaaatgtatgaaactcaa
gaagaatgaagaccaaagtgtggacactttgccccttcttagaattggga
acaaaatacccatggaaggagttacagagacaaagtttggagctgtgaca
aaaggatggaccatctagagtctcccatatctgggaatccatcccataat
cagcttccaaaactgacagcattgcacacactagcaagattttgctga

tttgtttagctctgaaccccattttttaatggacttatttgaatttctgg
agttctgcttcttgagctctttgtatatattgggaacacaggacccccca
tggagaagctagagaaagtactccagaagctgaaggggtctgcaacccta
taggtggaacaacaatatgaactaaccagtacccccagagctcatatctc
tagctgcatttgtagcagagatggcccagtcggccatcacagggaagaga
ggccccttggtattgcaaactttatatgccccagtacagaggaatgccag
gaccaagaagagggagtgggtgggtaggggagcagggcagagggagggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053904_104054363
seq2: B6Ng01-053K07.b_48_517 (reverse)

seq1  TTAATAG----------CTCCATTGTGTAAATGTACCACATTTTCTGTAT  40
      |||||||          ||||||||||||||||||| |||||||||||||
seq2  TTAATAGCTGAGTAGTACTCCATTGTGTAAATGTACAACATTTTCTGTAT  50

seq1  CTATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTCCTGGCTATTA  90
      | |||||||||||||||||||||||| |||||||||||| ||||||||||
seq2  CCATTCCTCTGTTGAGGGGCATCTGGTTTCTTTCCAGCTTCTGGCTATTA  100

seq1  TAAATAAGGCTGCTATGAATATAGTGGAGCATGTGTCCTTCTTACCGGTT  140
      |||||||||||||||||||  ||||||||||||||||||||| |||||||
seq2  TAAATAAGGCTGCTATGAACGTAGTGGAGCATGTGTCCTTCTGACCGGTT  150

seq1  GGGGCATCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATCCTCCGG  190
      ||| |||||||||||||||||||||| || |||||||  ||||||||| |
seq2  GGGACATCTTCTGGATATATGCCCAGGAGTGGTATTGTGGGATCCTCCAG  200

seq1  TAGTACTATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCCAGAGTG  240
      |||||||||||||| |||||||| ||||||||| || |||||||||||||
seq2  TAGTACTATGTCCAGTTTTCTGAGGAACCGCCAAACTGATTTCCAGAGTG  250

seq1  GTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTCT  290
      ||| ||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GTTATACAAGCTTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTCT  300

seq1  CCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCAT  340
      ||||||||||||||||||||||||||||||||| |||| |||||||||||
seq2  CCACATCCTCGCCAGCATCTGCTGTCACCTGAAATTTTTATCTTAGCCAT  350

seq1  TCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCCC  390
      ||| ||||||||||||||||||||||| ||||||||||||||| ||||||
seq2  TCTAACTGGTGTGAGGTGGAATCTCAGTGTTGTTTTGATTTGCTTTTCCC  400

seq1  TGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCGG  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCGG  450

seq1  TATTCCTCAGGTGAGAATTC  460
      ||||||||||||||||||||
seq2  TATTCCTCAGGTGAGAATTC  470


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